Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080576
CDS Infomation

pacid=37476352 polypeptide=PGSC0003DMP400054649 locus=PGSC0003DMG400031377 ID=PGSC0003DMT400080576.v4.03 annot-version=v4.03
Sequence

ATGGTTTTTGATTCAGTTTCTGCTATTACCCCTGATTTCCCTAACGTATTTTGGGTAAAC
CCATCTCCTTCTCCATGTAAAAGTAATGGCAATTCGTTGGTGACGAGGAGGAGGAGTAGG
GGGAAATTGGGTTTGGATTCGAGTTGGAGGTATAGGATTCGTGCGAAATGGGCAATTCGA
GCTTGTGTGAATGGTGGAGACCACCATAATTTTGACATGCAGATTACGAATAGTGCTAGA
AGAGGAGCTAGAAATATTGTAGTTAAGAGATTTGCTGATGAATTGGATGCTTATGGAAGA
GTCTCTGAGGAATTAGAAGCTGCTAGTCGTTCTAGTAACAATTTTGCTAGTTTTCAAGAA
GACCCTTTTGTAGATAAGCTAAGGACTCAATTGGGGGTGATGCATCCATTACCTTCACCT
CCAATAAATCGAAATATTTTCGGTCTTTTTGCATTGTTTTTCTTTGTTGGTATTGTTTTT
GATAAGGTTTGGACATCTAGAAAGAGTAATGCTAAGTCAAACAATGGAGGAAACTCCGGG
ATATGGTCACAGGTCCCAGCAAACCTTTCTTCATTGTTGGAGAAGGATTTGCAAAGGAAA
GAGTCAGTGGAGTGGGTAAACATGGTGTTAGGGAAGTTGTGGAAGGTCTATAAACCTAGG
ATTGAGAATTGGATCATTGGTTTGCTTCAGCCTGTCATTGATAATCTCAAAAAGCCTGAT
TATGTTCAGAGAGTTGAGATAAAGCAATTCTCACTGGGGGATGAGCCTCTCTCTGTTAGG
AGCGTGGAGCGGAAAACTTCTCGTGGAGTCAATGATTTGCAGTATCAGATAGGTCTCCGA
TACACTGGTGGTGCTCGCATGCTGTTAATGCTGTCACTAAAATTTGGAGTCATCCCCATT
TCTGTGCCAGTCGGTGTTCGGAACTTTGACATTGATGGTGAACTCTGGGTCAAGTTACGA
TTAATACAAACAGAGCCTTGGATTGGAGCTGTTTCTTGGGCTTTTGTTTCCCTTCCCAAG
ATAAAGCTTGACTTGTCACCATTCCGTTTGTTCAACCTAATGGCAATTCCTGTTCTATCA
ATGTTTTTGAAGAAACTTCTTACTGAGGATTTACCTCGTCTCTTTGTTCGTCCGAAAAAA
ATTGTGTTGGATTTTCAGAAAGGGAAAACAGTCGGCCCTATTCCAAGTGATCCTAAGTCT
GGTCAAAGTGAACAACTTAAGACTGGAGAAATGCAAGAAGGAAATAATGACTTTGCTGGA
GAACTATCAGTGACTCTTGTTGATGCAAGGAAACTCTCTTATATCATCTATGGAAAAACT
GATCCATATGTTAATCTAAGACTTGGAGATCAAGTAATACGCAGCAAAAGAAACAGTCAA
ACTACTGTTATTGGACCTCCTGGAGAGCCTATATGGAATCAGGATTTTCACATGTTTGTC
ACAAACCCCAGGGGACAAAAGCTATATATAGAAGCAAAGGATTCCTTTGGTTTTACAGAT
TTGACTATTGGCTCAGGGGAGGTTGATCTGGTATCTCTCGAAGATACTGTACCGACAGAC
AAAATTGTGATCCTCCGAGGTTGGGGACTACTGGGACCAAGGCCTGTAGGAGAGATTTTA
CTGCGACTGACATATAAAGCTTACGTCGAAGATGAGGAGGACGAAAGGATTGAAGCAAGA
TCCAAGTATTTGGATGCTTCAGATGATGAATCATCTGACTTGGATGAACGAGATACTGCT
GTGTATGAGCAGCGTAGTGGAACAGATAAAGAATCATTTATGGATTTATTAGCAGCATTA
ATTGTCAGCGAGGAATTCCAAGGGATCGTGGCATCTGAAACAGGCAATACTAAATCTGTA
GATGATTTTAAAACTAGAGTGTCAACATCAAGACAACGTACTCCTTCTAGGTCTGTACAG
CAAACTTCTGATACTGTTCCTGAAAACTTTGGAGAATCACCCCTGTTTTGGCTAGCGATT
ATTACAAGTATCTCAGTTCTAATTGCTCTCAACGTCAGTGGTTCTAGCATTTTCAATCCA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400054649
PEP Infomation

pacid=37476352 transcript=PGSC0003DMT400080576 locus=PGSC0003DMG400031377 ID=PGSC0003DMT400080576.v4.03 annot-version=v4.03
Sequence

MVFDSVSAITPDFPNVFWVNPSPSPCKSNGNSLVTRRRSRGKLGLDSSWRYRIRAKWAIR
ACVNGGDHHNFDMQITNSARRGARNIVVKRFADELDAYGRVSEELEAASRSSNNFASFQE
DPFVDKLRTQLGVMHPLPSPPINRNIFGLFALFFFVGIVFDKVWTSRKSNAKSNNGGNSG
IWSQVPANLSSLLEKDLQRKESVEWVNMVLGKLWKVYKPRIENWIIGLLQPVIDNLKKPD
YVQRVEIKQFSLGDEPLSVRSVERKTSRGVNDLQYQIGLRYTGGARMLLMLSLKFGVIPI
SVPVGVRNFDIDGELWVKLRLIQTEPWIGAVSWAFVSLPKIKLDLSPFRLFNLMAIPVLS
MFLKKLLTEDLPRLFVRPKKIVLDFQKGKTVGPIPSDPKSGQSEQLKTGEMQEGNNDFAG
ELSVTLVDARKLSYIIYGKTDPYVNLRLGDQVIRSKRNSQTTVIGPPGEPIWNQDFHMFV
TNPRGQKLYIEAKDSFGFTDLTIGSGEVDLVSLEDTVPTDKIVILRGWGLLGPRPVGEIL
LRLTYKAYVEDEEDERIEARSKYLDASDDESSDLDERDTAVYEQRSGTDKESFMDLLAAL
IVSEEFQGIVASETGNTKSVDDFKTRVSTSRQRTPSRSVQQTSDTVPENFGESPLFWLAI
ITSISVLIALNVSGSSIFNP*

Transcript Sequence

Transcript ID

PGSC0003DMT400080576
Transcript Infomation

pacid=37476352 locus=PGSC0003DMG400031377 ID=PGSC0003DMT400080576.v4.03 annot-version=v4.03
Sequence

ATGGTTTTTGATTCAGTTTCTGCTATTACCCCTGATTTCCCTAACGTATTTTGGGTAAAC
CCATCTCCTTCTCCATGTAAAAGTAATGGCAATTCGTTGGTGACGAGGAGGAGGAGTAGG
GGGAAATTGGGTTTGGATTCGAGTTGGAGGTATAGGATTCGTGCGAAATGGGCAATTCGA
GCTTGTGTGAATGGTGGAGACCACCATAATTTTGACATGCAGATTACGAATAGTGCTAGA
AGAGGAGCTAGAAATATTGTAGTTAAGAGATTTGCTGATGAATTGGATGCTTATGGAAGA
GTCTCTGAGGAATTAGAAGCTGCTAGTCGTTCTAGTAACAATTTTGCTAGTTTTCAAGAA
GACCCTTTTGTAGATAAGCTAAGGACTCAATTGGGGGTGATGCATCCATTACCTTCACCT
CCAATAAATCGAAATATTTTCGGTCTTTTTGCATTGTTTTTCTTTGTTGGTATTGTTTTT
GATAAGGTTTGGACATCTAGAAAGAGTAATGCTAAGTCAAACAATGGAGGAAACTCCGGG
ATATGGTCACAGGTCCCAGCAAACCTTTCTTCATTGTTGGAGAAGGATTTGCAAAGGAAA
GAGTCAGTGGAGTGGGTAAACATGGTGTTAGGGAAGTTGTGGAAGGTCTATAAACCTAGG
ATTGAGAATTGGATCATTGGTTTGCTTCAGCCTGTCATTGATAATCTCAAAAAGCCTGAT
TATGTTCAGAGAGTTGAGATAAAGCAATTCTCACTGGGGGATGAGCCTCTCTCTGTTAGG
AGCGTGGAGCGGAAAACTTCTCGTGGAGTCAATGATTTGCAGTATCAGATAGGTCTCCGA
TACACTGGTGGTGCTCGCATGCTGTTAATGCTGTCACTAAAATTTGGAGTCATCCCCATT
TCTGTGCCAGTCGGTGTTCGGAACTTTGACATTGATGGTGAACTCTGGGTCAAGTTACGA
TTAATACAAACAGAGCCTTGGATTGGAGCTGTTTCTTGGGCTTTTGTTTCCCTTCCCAAG
ATAAAGCTTGACTTGTCACCATTCCGTTTGTTCAACCTAATGGCAATTCCTGTTCTATCA
ATGTTTTTGAAGAAACTTCTTACTGAGGATTTACCTCGTCTCTTTGTTCGTCCGAAAAAA
ATTGTGTTGGATTTTCAGAAAGGGAAAACAGTCGGCCCTATTCCAAGTGATCCTAAGTCT
GGTCAAAGTGAACAACTTAAGACTGGAGAAATGCAAGAAGGAAATAATGACTTTGCTGGA
GAACTATCAGTGACTCTTGTTGATGCAAGGAAACTCTCTTATATCATCTATGGAAAAACT
GATCCATATGTTAATCTAAGACTTGGAGATCAAGTAATACGCAGCAAAAGAAACAGTCAA
ACTACTGTTATTGGACCTCCTGGAGAGCCTATATGGAATCAGGATTTTCACATGTTTGTC
ACAAACCCCAGGGGACAAAAGCTATATATAGAAGCAAAGGATTCCTTTGGTTTTACAGAT
TTGACTATTGGCTCAGGGGAGGTTGATCTGGTATCTCTCGAAGATACTGTACCGACAGAC
AAAATTGTGATCCTCCGAGGTTGGGGACTACTGGGACCAAGGCCTGTAGGAGAGATTTTA
CTGCGACTGACATATAAAGCTTACGTCGAAGATGAGGAGGACGAAAGGATTGAAGCAAGA
TCCAAGTATTTGGATGCTTCAGATGATGAATCATCTGACTTGGATGAACGAGATACTGCT
GTGTATGAGCAGCGTAGTGGAACAGATAAAGAATCATTTATGGATTTATTAGCAGCATTA
ATTGTCAGCGAGGAATTCCAAGGGATCGTGGCATCTGAAACAGGCAATACTAAATCTGTA
GATGATTTTAAAACTAGAGTGTCAACATCAAGACAACGTACTCCTTCTAGGTCTGTACAG
CAAACTTCTGATACTGTTCCTGAAAACTTTGGAGAATCACCCCTGTTTTGGCTAGCGATT
ATTACAAGTATCTCAGTTCTAATTGCTCTCAACGTCAGTGGTTCTAGCATTTTCAATCCA
TGA