Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080569
CDS Infomation

pacid=37474971 polypeptide=PGSC0003DMP400054644 locus=PGSC0003DMG400031374 ID=PGSC0003DMT400080569.v4.03 annot-version=v4.03
Sequence

ATGGTGGGTCCTACACCGCCGCAGAAGCTGCAAATTCAGCCTCCACCTTCTTCTACGCCG
GCGGCGGCGCCTTCAGCTGAAGAAGAAGCTCTCAAGAGAAACACTGATTGTGTCTACTTT
CTAGCTTCTCCTCTTACATGCAAGAAGGGAAGCGAGTGTGAGTACCGTCATAGTGATGCT
GCTCGGCTTAATCCTCGAGATTGCTGGTACTGGTTGAATGGAAGCTGCTTAAACCCAAAA
TGCGCATTCCGGCACCCTCCTCTTGATGGACTTTTGGGAGCTCAAGTTACAACTCCTACA
GGATCTTCTGCACTGCCAGTGGCATCTGTTGCACCTACACCAAATGTTCCATATGGTTCT
AGCAAGCAAGGTGTACCATGCATTTTCTTCCAGCAAGGGTTTTGTTTAAAAGGTGATAGG
TGTCCATTTTTCCATGCACCATTGTTTGTGTCTAACAAAGCTCCTCCACATCCTGTATCT
ACTGAGAAAACCAATTTTAAGGCATTTGGTGGGCTTGAAAAGTGTGTGCAAGAGAAGACA
TTTTTTCAAGCAAATATTTGGAAGTCTGGTGAATTATCTGTACAAGCACAACCAGTTGAG
AAACTGAAAACTCCTTTGCCCAAGAATAATGCTGCCTTTAATGAGAATGTGTTGCCACCC
AATCCTGTCATTGATGTTGCGCATCACAGGCACAAACCAAAAAGTGTGCCGCCTCCAAAT
GGGAATTCTGTTGGTAGATCCAACAGAGTGCAACAGTCTGCTAGGTTTGATGATCACAGT
AGCTTTCAGAACAAAGATGATGAGATTTCAAGGGAGCTTTCACCTGGTTTTGATGTTCTT
GTGGATGATGAGCTCAGAGGTACTGATTTTTATCATGGTGAAGGTCGATATGGCAGAAAT
GGGGGAAGGAATGAATACGATATTGGCCGCTCTGCTGATTTTACTTCAGTTGCAGATGTG
GACCAAGATATGTACCATGATGTCTATGGGCATGACTCTCACGACAGGCTTCCGGATCGC
TCTGGTAGGGTGCAGCATAGAGCTTCTTCTGAGAGAGTACAAGGGGAATCCGCTCATCTT
GAAAGGAGACGCTATGGTAGAGCTCACAGCCCTGAAGAAGTTCGAGAGCCAGATCTGAGG
CATCGTTTATCAAAGCATAACAGGACTAATGGTTTGAGGTCAGTCATTAGTCATGACTAT
GCAAGTGAAAAACATGTTGAGGATCGAGGCTACCAAAGTTCCAGGAGGGATCGACCCTAT
GTACCTTCACATGATAGTTCCCTTGCTAGTCGTCTTCGCGGAAGAATAAAGATACCAAGT
AGATCACCCTCTCCAACTAATGGGACAGACATGCGGCTGGATAGGGCTAGGGACCGTGGC
AGGTTATCTTCAGAAAGGCCACAGCTTTTCTCTCAACAGGGAAGGCTTCGTGATAGAATA
AAGGGAAGAGTGCAAGAGGATCTCAATGATACTGGAAGAAATAACAGTGGTCCACGTATA
AGAAGAGATGTAAGCGAGAATGATTCAAAATTTTCTGGTCCAAGAAGTCTTGCTGAACTT
AAAGGTCAGAAAACTGCTGAGACCACTGAACAAAATATTGACGAGCAACAGGCCCTAGGG
AAGCGTAAGTTCCAAAAGCGTGATGACTATCAGCAAACAGGAGGGGATACTGTTTCATTT
GACGGACCAATGCCTCTGCAAGAGATCTTGAAGAGAAAAAGAAGCAGTAAAACAGGCATG
CCATCTGATAAGAGTGAAGACTATCAACATAAAAGAAAGGACCACTCTGTGCCAGTGGTG
ACTTCCTCCATCTCCAGGAACAATACTGACTTTGGGCAAAAGGAAGAGTCTGATCCTCCA
TCAGGTGTATCAGCTGATCATCAATCTCCTGCACACCATGGTGCAAATGAACTTGAAGCT
GAAGAAGGGATGATTGTGGAAGAAGCAGACGATCAAGACCCTGAAGCCGAAGGTCATGAT
CAAAGAGATGGAGACTATGATTATGAGCAGGTCGATGGTGAAGATTACAATTTAGACGAA
GGTGAGAATATTGATGCTGGTGAAGAATACCTGGATGATGATGATGAAGATGACTTTGCT
AAGAAGATGGGTGTTGTTTTCTCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400054644
PEP Infomation

pacid=37474971 transcript=PGSC0003DMT400080569 locus=PGSC0003DMG400031374 ID=PGSC0003DMT400080569.v4.03 annot-version=v4.03
Sequence

MVGPTPPQKLQIQPPPSSTPAAAPSAEEEALKRNTDCVYFLASPLTCKKGSECEYRHSDA
ARLNPRDCWYWLNGSCLNPKCAFRHPPLDGLLGAQVTTPTGSSALPVASVAPTPNVPYGS
SKQGVPCIFFQQGFCLKGDRCPFFHAPLFVSNKAPPHPVSTEKTNFKAFGGLEKCVQEKT
FFQANIWKSGELSVQAQPVEKLKTPLPKNNAAFNENVLPPNPVIDVAHHRHKPKSVPPPN
GNSVGRSNRVQQSARFDDHSSFQNKDDEISRELSPGFDVLVDDELRGTDFYHGEGRYGRN
GGRNEYDIGRSADFTSVADVDQDMYHDVYGHDSHDRLPDRSGRVQHRASSERVQGESAHL
ERRRYGRAHSPEEVREPDLRHRLSKHNRTNGLRSVISHDYASEKHVEDRGYQSSRRDRPY
VPSHDSSLASRLRGRIKIPSRSPSPTNGTDMRLDRARDRGRLSSERPQLFSQQGRLRDRI
KGRVQEDLNDTGRNNSGPRIRRDVSENDSKFSGPRSLAELKGQKTAETTEQNIDEQQALG
KRKFQKRDDYQQTGGDTVSFDGPMPLQEILKRKRSSKTGMPSDKSEDYQHKRKDHSVPVV
TSSISRNNTDFGQKEESDPPSGVSADHQSPAHHGANELEAEEGMIVEEADDQDPEAEGHD
QRDGDYDYEQVDGEDYNLDEGENIDAGEEYLDDDDEDDFAKKMGVVFS*

Transcript Sequence

Transcript ID

PGSC0003DMT400080569
Transcript Infomation

pacid=37474971 locus=PGSC0003DMG400031374 ID=PGSC0003DMT400080569.v4.03 annot-version=v4.03
Sequence

ATGGTGGGTCCTACACCGCCGCAGAAGCTGCAAATTCAGCCTCCACCTTCTTCTACGCCG
GCGGCGGCGCCTTCAGCTGAAGAAGAAGCTCTCAAGAGAAACACTGATTGTGTCTACTTT
CTAGCTTCTCCTCTTACATGCAAGAAGGGAAGCGAGTGTGAGTACCGTCATAGTGATGCT
GCTCGGCTTAATCCTCGAGATTGCTGGTACTGGTTGAATGGAAGCTGCTTAAACCCAAAA
TGCGCATTCCGGCACCCTCCTCTTGATGGACTTTTGGGAGCTCAAGTTACAACTCCTACA
GGATCTTCTGCACTGCCAGTGGCATCTGTTGCACCTACACCAAATGTTCCATATGGTTCT
AGCAAGCAAGGTGTACCATGCATTTTCTTCCAGCAAGGGTTTTGTTTAAAAGGTGATAGG
TGTCCATTTTTCCATGCACCATTGTTTGTGTCTAACAAAGCTCCTCCACATCCTGTATCT
ACTGAGAAAACCAATTTTAAGGCATTTGGTGGGCTTGAAAAGTGTGTGCAAGAGAAGACA
TTTTTTCAAGCAAATATTTGGAAGTCTGGTGAATTATCTGTACAAGCACAACCAGTTGAG
AAACTGAAAACTCCTTTGCCCAAGAATAATGCTGCCTTTAATGAGAATGTGTTGCCACCC
AATCCTGTCATTGATGTTGCGCATCACAGGCACAAACCAAAAAGTGTGCCGCCTCCAAAT
GGGAATTCTGTTGGTAGATCCAACAGAGTGCAACAGTCTGCTAGGTTTGATGATCACAGT
AGCTTTCAGAACAAAGATGATGAGATTTCAAGGGAGCTTTCACCTGGTTTTGATGTTCTT
GTGGATGATGAGCTCAGAGGTACTGATTTTTATCATGGTGAAGGTCGATATGGCAGAAAT
GGGGGAAGGAATGAATACGATATTGGCCGCTCTGCTGATTTTACTTCAGTTGCAGATGTG
GACCAAGATATGTACCATGATGTCTATGGGCATGACTCTCACGACAGGCTTCCGGATCGC
TCTGGTAGGGTGCAGCATAGAGCTTCTTCTGAGAGAGTACAAGGGGAATCCGCTCATCTT
GAAAGGAGACGCTATGGTAGAGCTCACAGCCCTGAAGAAGTTCGAGAGCCAGATCTGAGG
CATCGTTTATCAAAGCATAACAGGACTAATGGTTTGAGGTCAGTCATTAGTCATGACTAT
GCAAGTGAAAAACATGTTGAGGATCGAGGCTACCAAAGTTCCAGGAGGGATCGACCCTAT
GTACCTTCACATGATAGTTCCCTTGCTAGTCGTCTTCGCGGAAGAATAAAGATACCAAGT
AGATCACCCTCTCCAACTAATGGGACAGACATGCGGCTGGATAGGGCTAGGGACCGTGGC
AGGTTATCTTCAGAAAGGCCACAGCTTTTCTCTCAACAGGGAAGGCTTCGTGATAGAATA
AAGGGAAGAGTGCAAGAGGATCTCAATGATACTGGAAGAAATAACAGTGGTCCACGTATA
AGAAGAGATGTAAGCGAGAATGATTCAAAATTTTCTGGTCCAAGAAGTCTTGCTGAACTT
AAAGGTCAGAAAACTGCTGAGACCACTGAACAAAATATTGACGAGCAACAGGCCCTAGGG
AAGCGTAAGTTCCAAAAGCGTGATGACTATCAGCAAACAGGAGGGGATACTGTTTCATTT
GACGGACCAATGCCTCTGCAAGAGATCTTGAAGAGAAAAAGAAGCAGTAAAACAGGCATG
CCATCTGATAAGAGTGAAGACTATCAACATAAAAGAAAGGACCACTCTGTGCCAGTGGTG
ACTTCCTCCATCTCCAGGAACAATACTGACTTTGGGCAAAAGGAAGAGTCTGATCCTCCA
TCAGGTGTATCAGCTGATCATCAATCTCCTGCACACCATGGTGCAAATGAACTTGAAGCT
GAAGAAGGGATGATTGTGGAAGAAGCAGACGATCAAGACCCTGAAGCCGAAGGTCATGAT
CAAAGAGATGGAGACTATGATTATGAGCAGGTCGATGGTGAAGATTACAATTTAGACGAA
GGTGAGAATATTGATGCTGGTGAAGAATACCTGGATGATGATGATGAAGATGACTTTGCT
AAGAAGATGGGTGTTGTTTTCTCATAA