Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080512
CDS Infomation

pacid=37462022 polypeptide=PGSC0003DMP400054609 locus=PGSC0003DMG400031350 ID=PGSC0003DMT400080512.v4.03 annot-version=v4.03
Sequence

ATGGCTATCTCTACATCCTTTTGCCGCCCCATATCCTCTTTCAATGCTATCAGTTCACCG
TCTCTCTGTTACTTCAAACCCTTCTACCACCACTTGAAACTTGATCCTTCTTTTGCCCTA
GTCAAGTGTTGCTCCTCTCACATTGGACAATCTCCAGAACACATGAACGGCAGGCAACCT
GATTTATCTCCCATAGCTCCTTTTGGTGTCACGATGACAAATAATGGAACATCTAAACCA
TCATATAGATGGCGTAGGGTACTGCTTAAAGTTAGTGGTGAGGCACTAGCAGGAGATCAA
GCACAAAACATTGACCCAAAGATCACAATGGCCATTGCGAGGGAGGTGGCAGCTGTCACT
CGACTTGGCATTGAGGTTGCAATAGTTGTTGGTGGAGGTAATATTTTTCGTGGATCCTCC
TGGGCAGGAAGTAGTGGACTGGAACGTTCTTCTGCTGATTATATTGGGATGTTGGCTACT
GTAATGAATGCAATATTCTTACAAGCTACAATGGAGAGCATTGGAATCCCCACAAGAGTC
CAAACTGCATTTAGAATGTCAGAAGTTGCTGAACCATATATCCGTAGAAGGGCTGTTAGG
CATCTTGAGAAAGGGAGAGTAGTAATTTTTGCAGCAGGAACTGGAAATCCCTTCTTCACG
ACAGACACTGCTGCAGCTCTGCGTTGTGCAGAGATTAATGCTGAGGTGGTCTTGAAGGCA
ACAAACGTTGATGGAGTCTATGATGATAACCCTAAGCATAATCCTGATGCTCGTCTTCAG
GATAACCTGACTTACCATGATGTAATTTCAAAAGAGCTCTCAGTGATGGACCTTACTGCA
ATTACTTTGTGCCAAGAGAATAACATTCCAGTTGTCGTTTTTAATCTCAATAAAACAGGT
AACATTGCTAAAGCCATTAAAGGAGAGAGGGTTGGCACATTGATTGGTGACACATGGAAT
ACAGAAGCAGTAGTATCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400054609
PEP Infomation

pacid=37462022 transcript=PGSC0003DMT400080512 locus=PGSC0003DMG400031350 ID=PGSC0003DMT400080512.v4.03 annot-version=v4.03
Sequence

MAISTSFCRPISSFNAISSPSLCYFKPFYHHLKLDPSFALVKCCSSHIGQSPEHMNGRQP
DLSPIAPFGVTMTNNGTSKPSYRWRRVLLKVSGEALAGDQAQNIDPKITMAIAREVAAVT
RLGIEVAIVVGGGNIFRGSSWAGSSGLERSSADYIGMLATVMNAIFLQATMESIGIPTRV
QTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKA
TNVDGVYDDNPKHNPDARLQDNLTYHDVISKELSVMDLTAITLCQENNIPVVVFNLNKTG
NIAKAIKGERVGTLIGDTWNTEAVVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400080512
Transcript Infomation

pacid=37462022 locus=PGSC0003DMG400031350 ID=PGSC0003DMT400080512.v4.03 annot-version=v4.03
Sequence

ATGGCTATCTCTACATCCTTTTGCCGCCCCATATCCTCTTTCAATGCTATCAGTTCACCG
TCTCTCTGTTACTTCAAACCCTTCTACCACCACTTGAAACTTGATCCTTCTTTTGCCCTA
GTCAAGTGTTGCTCCTCTCACATTGGACAATCTCCAGAACACATGAACGGCAGGCAACCT
GATTTATCTCCCATAGCTCCTTTTGGTGTCACGATGACAAATAATGGAACATCTAAACCA
TCATATAGATGGCGTAGGGTACTGCTTAAAGTTAGTGGTGAGGCACTAGCAGGAGATCAA
GCACAAAACATTGACCCAAAGATCACAATGGCCATTGCGAGGGAGGTGGCAGCTGTCACT
CGACTTGGCATTGAGGTTGCAATAGTTGTTGGTGGAGGTAATATTTTTCGTGGATCCTCC
TGGGCAGGAAGTAGTGGACTGGAACGTTCTTCTGCTGATTATATTGGGATGTTGGCTACT
GTAATGAATGCAATATTCTTACAAGCTACAATGGAGAGCATTGGAATCCCCACAAGAGTC
CAAACTGCATTTAGAATGTCAGAAGTTGCTGAACCATATATCCGTAGAAGGGCTGTTAGG
CATCTTGAGAAAGGGAGAGTAGTAATTTTTGCAGCAGGAACTGGAAATCCCTTCTTCACG
ACAGACACTGCTGCAGCTCTGCGTTGTGCAGAGATTAATGCTGAGGTGGTCTTGAAGGCA
ACAAACGTTGATGGAGTCTATGATGATAACCCTAAGCATAATCCTGATGCTCGTCTTCAG
GATAACCTGACTTACCATGATGTAATTTCAAAAGAGCTCTCAGTGATGGACCTTACTGCA
ATTACTTTGTGCCAAGAGAATAACATTCCAGTTGTCGTTTTTAATCTCAATAAAACAGGT
AACATTGCTAAAGCCATTAAAGGAGAGAGGGTTGGCACATTGATTGGTGACACATGGAAT
ACAGAAGCAGTAGTATCTTAA