Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080508
CDS Infomation

pacid=37461039 polypeptide=PGSC0003DMP400054606 locus=PGSC0003DMG400031348 ID=PGSC0003DMT400080508.v4.03 annot-version=v4.03
Sequence

ATGGCACTGGTAGATGCAAGAGATGACGATTACACAGTAAGTTTCATCAGAAAATCTGTA
GTAAAAGCTACCGTTACAATTCCAGAACCCTATGTGCTCACCCTTTCGAACCTCGACCTC
CTCTCTGGACGCTTTCCAGTGACTTACTTTTACATCTACCATAAAGCAAAACATAACAGC
TCATCAGCTTCCATTGCGGATGAGTTAAGAAAATCCCTTGCTAATTGCCTCTCACATTTT
TACCCCTTTGCTGGTAGAATTATTTCAAATACAGAGACACATGAGCCTGAAATTGTATGT
GATAATACTGGTGCTCTGTTTCTCGAAGCACAATCGAGCAATTCTCTAAAAGAACTTGAT
TTGTATAATCTCAACAAGTGTTTGGAGGGGAAATTAGTTCCAACTAATCAGGAGTTTCCA
GTACAAGTCCAACTCACAAATTACAAATGTGGAGGCATAATTATAACATTCACATTTGAT
CATGCTTTAGGTGATGCTAGTTCCTTCAGTAAGTTTCTACTGATGTGGTCCCAGATAGCG
AGGAAAAAATCCCTCTCTTTCTCGCCGGATCACAGGCGATATCTTCTCCGTGCACGAAAT
CCACCAATTTATAACCATTCCTTTGACGAATCGTTCATTTCATGCTCCCTCAATGATATA
CACAACATATCAACCCCGAGAACTCTGGTTAAGCGCCTATACTACATTGATGCATCGAGC
ATCGATATGCTGCAGAAAATCGTATCTATTGATGGTACCAAAAGGACTAAAATCGAGGCG
TTTTCAGCTTATATCTGGAAGATTATGGTCAAGGCAATTGATAAAGGACACAAGAAGTGT
AAGATGGGATGGTTAGTGGATGGAAGAACAAGGATATGCACTTACAATGAAAAAGTAACG
GAGAACTATATCGGGAATGCTTTATCTATAGCTGTTGGAGAAGCAAGTGTAAGTGAAATT
GATCAAGCATTGTTGTCAGATGTTGCGAAGAAGGTGCACAATGCTATCTCTAAAGTGACT
AGTGCAGAACATTTCTTGGATTTAATTGATTGGATTGAATGGAACAAGCCTGGATTGATG
CTCTCGAAGATTGTCCTTGGACAAGGTGGTCCGGCTATTGTAGTTTCATCTGGACGGAGA
TTCCCGGTGGCTGAAGTAGATTTTGGCTTCGGAAGTCCAGTTCTAGGAACGGTCTACTCC
ACCATAAAAAAACTTGGAGTCGGTTACATCAACCAAAGGCAGGGTGCTAAGGGAGATGGA
TCATGGACTGTCTCAGCTATATTGTGGCCTGACATGATTGAAGCATTAGAATCAGATTCC
AATCATGTTTTTCAACCTATGACTTCAAATCATCTTAAACTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400054606
PEP Infomation

pacid=37461039 transcript=PGSC0003DMT400080508 locus=PGSC0003DMG400031348 ID=PGSC0003DMT400080508.v4.03 annot-version=v4.03
Sequence

MALVDARDDDYTVSFIRKSVVKATVTIPEPYVLTLSNLDLLSGRFPVTYFYIYHKAKHNS
SSASIADELRKSLANCLSHFYPFAGRIISNTETHEPEIVCDNTGALFLEAQSSNSLKELD
LYNLNKCLEGKLVPTNQEFPVQVQLTNYKCGGIIITFTFDHALGDASSFSKFLLMWSQIA
RKKSLSFSPDHRRYLLRARNPPIYNHSFDESFISCSLNDIHNISTPRTLVKRLYYIDASS
IDMLQKIVSIDGTKRTKIEAFSAYIWKIMVKAIDKGHKKCKMGWLVDGRTRICTYNEKVT
ENYIGNALSIAVGEASVSEIDQALLSDVAKKVHNAISKVTSAEHFLDLIDWIEWNKPGLM
LSKIVLGQGGPAIVVSSGRRFPVAEVDFGFGSPVLGTVYSTIKKLGVGYINQRQGAKGDG
SWTVSAILWPDMIEALESDSNHVFQPMTSNHLKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400080508
Transcript Infomation

pacid=37461039 locus=PGSC0003DMG400031348 ID=PGSC0003DMT400080508.v4.03 annot-version=v4.03
Sequence

ATGGCACTGGTAGATGCAAGAGATGACGATTACACAGTAAGTTTCATCAGAAAATCTGTA
GTAAAAGCTACCGTTACAATTCCAGAACCCTATGTGCTCACCCTTTCGAACCTCGACCTC
CTCTCTGGACGCTTTCCAGTGACTTACTTTTACATCTACCATAAAGCAAAACATAACAGC
TCATCAGCTTCCATTGCGGATGAGTTAAGAAAATCCCTTGCTAATTGCCTCTCACATTTT
TACCCCTTTGCTGGTAGAATTATTTCAAATACAGAGACACATGAGCCTGAAATTGTATGT
GATAATACTGGTGCTCTGTTTCTCGAAGCACAATCGAGCAATTCTCTAAAAGAACTTGAT
TTGTATAATCTCAACAAGTGTTTGGAGGGGAAATTAGTTCCAACTAATCAGGAGTTTCCA
GTACAAGTCCAACTCACAAATTACAAATGTGGAGGCATAATTATAACATTCACATTTGAT
CATGCTTTAGGTGATGCTAGTTCCTTCAGTAAGTTTCTACTGATGTGGTCCCAGATAGCG
AGGAAAAAATCCCTCTCTTTCTCGCCGGATCACAGGCGATATCTTCTCCGTGCACGAAAT
CCACCAATTTATAACCATTCCTTTGACGAATCGTTCATTTCATGCTCCCTCAATGATATA
CACAACATATCAACCCCGAGAACTCTGGTTAAGCGCCTATACTACATTGATGCATCGAGC
ATCGATATGCTGCAGAAAATCGTATCTATTGATGGTACCAAAAGGACTAAAATCGAGGCG
TTTTCAGCTTATATCTGGAAGATTATGGTCAAGGCAATTGATAAAGGACACAAGAAGTGT
AAGATGGGATGGTTAGTGGATGGAAGAACAAGGATATGCACTTACAATGAAAAAGTAACG
GAGAACTATATCGGGAATGCTTTATCTATAGCTGTTGGAGAAGCAAGTGTAAGTGAAATT
GATCAAGCATTGTTGTCAGATGTTGCGAAGAAGGTGCACAATGCTATCTCTAAAGTGACT
AGTGCAGAACATTTCTTGGATTTAATTGATTGGATTGAATGGAACAAGCCTGGATTGATG
CTCTCGAAGATTGTCCTTGGACAAGGTGGTCCGGCTATTGTAGTTTCATCTGGACGGAGA
TTCCCGGTGGCTGAAGTAGATTTTGGCTTCGGAAGTCCAGTTCTAGGAACGGTCTACTCC
ACCATAAAAAAACTTGGAGTCGGTTACATCAACCAAAGGCAGGGTGCTAAGGGAGATGGA
TCATGGACTGTCTCAGCTATATTGTGGCCTGACATGATTGAAGCATTAGAATCAGATTCC
AATCATGTTTTTCAACCTATGACTTCAAATCATCTTAAACTTTAG