Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080486
CDS Infomation

pacid=37425278 polypeptide=PGSC0003DMP400054589 locus=PGSC0003DMG400031336 ID=PGSC0003DMT400080486.v4.03 annot-version=v4.03
Sequence

ATGAATAATGTTCAGGAAAATTCATTTCATGATTTAGTTCCTTCTCCAACGTCTGAACAA
TCCTATAATGATTCTGCTTTAGAAGGTGTTGCAGCAAATTTTAAGTTATTGTTAAAGTTA
ATTCAAGACCAAAAAGATGCTTGTAATAAAGAAAACACAGATGGCCTAAGAATGTTGAGG
GTGGAAACTATGATGACAATTCTTGATAATGTTAGGACACGAATTAAGAAATGTCAATCT
TTTGGTGATAAGAGATCATCAGAATCTAAACTAAGGCGGTGTTACACAGATGTTAAGCTT
ACTAATAATGTTCGAAAGGAAAAGAAGCAGGATGAGGCAATGATCGATGAAAAAGAAGGA
TTAAAGAGGCAGCTAAACGCAAGCTTGGTAGCAAGAAAGAGACTTGAAGTCATGTGTTGG
AGCTTAGGGAAGGAAAAAGAAATTATGGCAGCGGAGTTATCAAAAAAGGTTCATGAAGTC
AATGAAATGGAGGATCTCATTAACGAATTAAAGGATAAAAATGAGTGTTTAGTAGAAAGA
TTACATGAAGGTAGTAAAGAAAAACAAGAGATAAAGGTAGAAACAAATAAGGCACTCTCT
GAACAATTGTTGAGGTCACTTGATGGCTATCGATCAATGAAGAGGAAATGGAAGAATGCA
CATGAGGTAAACATGAAAATGCATGCAAGTTTGGAGGAAATGAGACATAAAATTGAATCT
GGAATTCACCACTTCAAGCAACAAATCTCATCTGTTGAGGAGATTATTGAATTGGAGCAT
GTGATTGAAAGCTTAGAAATCCAAGTTGCAAAATATTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400054589
PEP Infomation

pacid=37425278 transcript=PGSC0003DMT400080486 locus=PGSC0003DMG400031336 ID=PGSC0003DMT400080486.v4.03 annot-version=v4.03
Sequence

MNNVQENSFHDLVPSPTSEQSYNDSALEGVAANFKLLLKLIQDQKDACNKENTDGLRMLR
VETMMTILDNVRTRIKKCQSFGDKRSSESKLRRCYTDVKLTNNVRKEKKQDEAMIDEKEG
LKRQLNASLVARKRLEVMCWSLGKEKEIMAAELSKKVHEVNEMEDLINELKDKNECLVER
LHEGSKEKQEIKVETNKALSEQLLRSLDGYRSMKRKWKNAHEVNMKMHASLEEMRHKIES
GIHHFKQQISSVEEIIELEHVIESLEIQVAKYL*

Transcript Sequence

Transcript ID

PGSC0003DMT400080486
Transcript Infomation

pacid=37425278 locus=PGSC0003DMG400031336 ID=PGSC0003DMT400080486.v4.03 annot-version=v4.03
Sequence

ATGAATAATGTTCAGGAAAATTCATTTCATGATTTAGTTCCTTCTCCAACGTCTGAACAA
TCCTATAATGATTCTGCTTTAGAAGGTGTTGCAGCAAATTTTAAGTTATTGTTAAAGTTA
ATTCAAGACCAAAAAGATGCTTGTAATAAAGAAAACACAGATGGCCTAAGAATGTTGAGG
GTGGAAACTATGATGACAATTCTTGATAATGTTAGGACACGAATTAAGAAATGTCAATCT
TTTGGTGATAAGAGATCATCAGAATCTAAACTAAGGCGGTGTTACACAGATGTTAAGCTT
ACTAATAATGTTCGAAAGGAAAAGAAGCAGGATGAGGCAATGATCGATGAAAAAGAAGGA
TTAAAGAGGCAGCTAAACGCAAGCTTGGTAGCAAGAAAGAGACTTGAAGTCATGTGTTGG
AGCTTAGGGAAGGAAAAAGAAATTATGGCAGCGGAGTTATCAAAAAAGGTTCATGAAGTC
AATGAAATGGAGGATCTCATTAACGAATTAAAGGATAAAAATGAGTGTTTAGTAGAAAGA
TTACATGAAGGTAGTAAAGAAAAACAAGAGATAAAGGTAGAAACAAATAAGGCACTCTCT
GAACAATTGTTGAGGTCACTTGATGGCTATCGATCAATGAAGAGGAAATGGAAGAATGCA
CATGAGGTAAACATGAAAATGCATGCAAGTTTGGAGGAAATGAGACATAAAATTGAATCT
GGAATTCACCACTTCAAGCAACAAATCTCATCTGTTGAGGAGATTATTGAATTGGAGCAT
GTGATTGAAAGCTTAGAAATCCAAGTTGCAAAATATTTGTAA