Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080468
CDS Infomation

pacid=37453724 polypeptide=PGSC0003DMP400054576 locus=PGSC0003DMG400031327 ID=PGSC0003DMT400080468.v4.03 annot-version=v4.03
Sequence

ATGAAAATTTCTTTGTTTTCCTTTCTTTTACTACTTCTTGTTCTCTCATCATCTTCATGG
TCAACATTAGCTGATAATCATGAAGCATTCATCCAATGCTTATCTCAAAGTAACAAAACA
TATTACACACCAAATAACTCTTCTTTTTCATCAATCCTTCAATTCTCCATACAAAATCTA
ATGTTCAATACAACTGAAACTCCTAAACCTCTTGTGATTGTCACCCCAGTGAGTGAATCC
GAGGTCCAACGAGTCATTCTTTGTGCTAAGAAAACTGGGATGCATGTTAGGGTTCGTAGT
GCAGGACATGATTATGAAGGCCTTTCTTATGTCTCTGAGGTTCCATTTGTTATAGTTGAC
CTTATCAACCTTAGAACAATCAATGTTGATGTCAATGATAAGAGTGCATGGGTTGAAGCT
GGATCAACTATTGGTGAACTCTATTATAGAATCGCGGAAAAAAGCAAAACCCTAGGGTTT
CCGGCTGGTGTTTGTCCAACGGTTGGTGTTGGTGGACATTTTAGTGGAGGTGGTTATGGT
ACTATGATGAGAAAATATGGCCTATCAGCTGATAACATTGTAGATGCACGATTGGTTGAC
GCGAATGGGAGGATTCTTGATAGGGTTTCCATGGGGGAAGATCTATTTTGGGCAATTAGA
GGAGGTGGTGGTAATACTTTTGGACTTGTCCTTTCATGGAAGATCAAATTGCTAGATGTT
CCTGAGAAAGTAACTGTTTTCACACTTGACAAGACATTGGAACAAAATCTCACTAAGCTT
ATTCATAAGTGGCAAAATGTTGCTCCAAGATTCCATGAAGATTTGTTCATTAGGATCATA
ATTCGTAGAGTGGACTCAAGTGATCAAGGTGGTAACAACAAACAAACAATTGTAGCTTCA
TTCAACTCTTTATTCTTTGGTGGAATCGATCGATTACTTCCCATCATGCAAGAAAATTTC
CCTGAATTAGGGTTGAGAAGAGAAGATTGCATTGAGATGAGCTGGATAGAGTCTATAATG
TACTTTGCAGGGTTCCCAATAGAGGGATCTTTTGATGTCTTGCTAAGTAGGGTTCAACCC
ACAACACGTTACTTCAAGGCAAAATCAGACTACGTGTATCAGCCAATTCCAGAGGGAGGT
CTTGAAGGAATATGGAGATTCTTCTTTGAAGATGAAGCTCAATCATCTTATATGATCTTG
ACTCCATACGGTGGGAGGATGGATGAGATTTTACCATCCGATATCCCGTTCCCCCATAGA
GCTGGGAATCTATACAAAATTCAACATTTGGTGTATTGGGATAAAGAAGGAGAAGAAGTA
GCTGAGAGGCATATAAGTTGGATAAGAAGGCTTTATTCTTACATGGCTCCTTTTGTTTCT
ATGTTTCCAAGAGCTGCTTATGTCAACTATAGGGATCTTGATATTGGAATGAACAACAAA
AAGGGATATACAAGCTATATGCAAGCTAAGGTTTGGGGGATGAAGTATTTCAAGAATAAT
TTTGATAGATTGGTTCATGTGAAGACTAAGGTGGATCCTTCAAACTTCTTTTGGAATGAA
CAAAGCATTCCTTCACTTACTTCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400054576
PEP Infomation

pacid=37453724 transcript=PGSC0003DMT400080468 locus=PGSC0003DMG400031327 ID=PGSC0003DMT400080468.v4.03 annot-version=v4.03
Sequence

MKISLFSFLLLLLVLSSSSWSTLADNHEAFIQCLSQSNKTYYTPNNSSFSSILQFSIQNL
MFNTTETPKPLVIVTPVSESEVQRVILCAKKTGMHVRVRSAGHDYEGLSYVSEVPFVIVD
LINLRTINVDVNDKSAWVEAGSTIGELYYRIAEKSKTLGFPAGVCPTVGVGGHFSGGGYG
TMMRKYGLSADNIVDARLVDANGRILDRVSMGEDLFWAIRGGGGNTFGLVLSWKIKLLDV
PEKVTVFTLDKTLEQNLTKLIHKWQNVAPRFHEDLFIRIIIRRVDSSDQGGNNKQTIVAS
FNSLFFGGIDRLLPIMQENFPELGLRREDCIEMSWIESIMYFAGFPIEGSFDVLLSRVQP
TTRYFKAKSDYVYQPIPEGGLEGIWRFFFEDEAQSSYMILTPYGGRMDEILPSDIPFPHR
AGNLYKIQHLVYWDKEGEEVAERHISWIRRLYSYMAPFVSMFPRAAYVNYRDLDIGMNNK
KGYTSYMQAKVWGMKYFKNNFDRLVHVKTKVDPSNFFWNEQSIPSLTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400080468
Transcript Infomation

pacid=37453724 locus=PGSC0003DMG400031327 ID=PGSC0003DMT400080468.v4.03 annot-version=v4.03
Sequence

ATGAAAATTTCTTTGTTTTCCTTTCTTTTACTACTTCTTGTTCTCTCATCATCTTCATGG
TCAACATTAGCTGATAATCATGAAGCATTCATCCAATGCTTATCTCAAAGTAACAAAACA
TATTACACACCAAATAACTCTTCTTTTTCATCAATCCTTCAATTCTCCATACAAAATCTA
ATGTTCAATACAACTGAAACTCCTAAACCTCTTGTGATTGTCACCCCAGTGAGTGAATCC
GAGGTCCAACGAGTCATTCTTTGTGCTAAGAAAACTGGGATGCATGTTAGGGTTCGTAGT
GCAGGACATGATTATGAAGGCCTTTCTTATGTCTCTGAGGTTCCATTTGTTATAGTTGAC
CTTATCAACCTTAGAACAATCAATGTTGATGTCAATGATAAGAGTGCATGGGTTGAAGCT
GGATCAACTATTGGTGAACTCTATTATAGAATCGCGGAAAAAAGCAAAACCCTAGGGTTT
CCGGCTGGTGTTTGTCCAACGGTTGGTGTTGGTGGACATTTTAGTGGAGGTGGTTATGGT
ACTATGATGAGAAAATATGGCCTATCAGCTGATAACATTGTAGATGCACGATTGGTTGAC
GCGAATGGGAGGATTCTTGATAGGGTTTCCATGGGGGAAGATCTATTTTGGGCAATTAGA
GGAGGTGGTGGTAATACTTTTGGACTTGTCCTTTCATGGAAGATCAAATTGCTAGATGTT
CCTGAGAAAGTAACTGTTTTCACACTTGACAAGACATTGGAACAAAATCTCACTAAGCTT
ATTCATAAGTGGCAAAATGTTGCTCCAAGATTCCATGAAGATTTGTTCATTAGGATCATA
ATTCGTAGAGTGGACTCAAGTGATCAAGGTGGTAACAACAAACAAACAATTGTAGCTTCA
TTCAACTCTTTATTCTTTGGTGGAATCGATCGATTACTTCCCATCATGCAAGAAAATTTC
CCTGAATTAGGGTTGAGAAGAGAAGATTGCATTGAGATGAGCTGGATAGAGTCTATAATG
TACTTTGCAGGGTTCCCAATAGAGGGATCTTTTGATGTCTTGCTAAGTAGGGTTCAACCC
ACAACACGTTACTTCAAGGCAAAATCAGACTACGTGTATCAGCCAATTCCAGAGGGAGGT
CTTGAAGGAATATGGAGATTCTTCTTTGAAGATGAAGCTCAATCATCTTATATGATCTTG
ACTCCATACGGTGGGAGGATGGATGAGATTTTACCATCCGATATCCCGTTCCCCCATAGA
GCTGGGAATCTATACAAAATTCAACATTTGGTGTATTGGGATAAAGAAGGAGAAGAAGTA
GCTGAGAGGCATATAAGTTGGATAAGAAGGCTTTATTCTTACATGGCTCCTTTTGTTTCT
ATGTTTCCAAGAGCTGCTTATGTCAACTATAGGGATCTTGATATTGGAATGAACAACAAA
AAGGGATATACAAGCTATATGCAAGCTAAGGTTTGGGGGATGAAGTATTTCAAGAATAAT
TTTGATAGATTGGTTCATGTGAAGACTAAGGTGGATCCTTCAAACTTCTTTTGGAATGAA
CAAAGCATTCCTTCACTTACTTCATAG