Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080467
CDS Infomation

pacid=37452650 polypeptide=PGSC0003DMP400054575 locus=PGSC0003DMG400031326 ID=PGSC0003DMT400080467.v4.03 annot-version=v4.03
Sequence

ATGAAGATTTCTTGGTTTTCCTTTATTTTTGTACTTGTTGTTCTCTCATCAGCTTCATGG
TCAGCATTAGCTGATAATCATGAAGAATTCATTCAATGTCTATCTCATAGTAACCAAACA
TCCTCCAATATTTACACACCAAATAACTCTTCTTTTCCATCAATCCTTCAATTCTCCATA
CAAAATCTACGGTTCAATACAACTGAAACTCCTAAACCTCTTGTGATTGTCACCCCAGTG
AGTGAATCCGAGGTCCAACGAGTCATTCTTTGTTCTAAGAAAACTGGGATGCACGTTAGG
GTTCGTGGTGCAGGACATGATTATGAAGGTCTTTCTTATGTCTCCGAGGTTCCATTCGTT
ATAGTTGACCTTATTAACCTTAGAACAATCAATGTTGATGTCAATGATAAGAGTGCATGG
GTTGAAGCTGGATCAACTATTGGTGAACTCTATTATAGAATCGCGGAGAAAAGCAAAACC
CTAGGGTTTCCGGCTGGTGTTTGTCCAACAGTTGGTGTTGGTGGACATTTTAGTGGAGGT
GGTTATGGTGTTATGCTGAGAAAATATGGCCTAGCAGCTGATAACATTGTAGATGCACGA
TTGATCGATGCCAATGGGAGGATTCTTGATAGGGTTTCCATGGGGGAAGATCTATTTTGG
GCAATTAGAGGAGGTGGTGGTAATACTTTTGGACTTGTCCTTGCATGGAAGATCAAATTA
GTAGATGTTCCTGAGATAGTAACTGTTTTCACACTTGACAAGACATTGGAACAAAATGCC
ACTAAGCTTGTTCATAGGTGGCAATATGTTGCTCCAAGATTCCATGAAGATTTGTTCATT
AGGATCTTGGTTAGTAAATTGAACTCAAGTAATCAAGGAGATGGTAACAACCAACAAACA
ATTGTAGCTTCATTCAACTCCATATTCCTTGGTGGTATCGATCGATTACTTCCCATCATG
AAAGAAAATTTCCCTGAATTAGGGTTGAGAAGAGAAGATTGCATTGAGATGAGTTGGATA
GAGTCTATAATGTACTTTGCAGGGTTCCCAACAGATGGACCTCTTGATGTCTTGCTAAGT
AGGGTTCAACTCTCAACGCGTTACTTCAAGGCAAAATCAGACTACGTGTATCAGCCAATT
CCAGAGGGAGGTCTTGAAGGAATATGGAGATTCTTCTTTGAAGATGAAGCTCAATCATCT
CAAGTAATCTTAAGTCCCTATGGTGGGAGGATGGATGAGATTTCACCATCCGCTATCCCG
TTCCCCCATAGAGCTGGGAATTTATACAAAATTCAACATTTGGTGTATTGGGATGAAGAA
GGAGAAGAAGTAGCTGAGAGGCATATAAGTTGGATAAGAAGGCTTTACTCTTACATGGCA
CCTTTTGTTTCTAAGTTACCAAGAGCTGCTTATATCAACTATAGGGATCTTGATATTGGA
GTGAATAACATCAAGGGATATACAAGCTATGTGCAAGCTAAGGTTTGGGGGATTAAGTAT
TTCAAGAATAATTTTGATAGATTGGTTCATGTGAAGACTAAGGTGGATCCTTCAAATTTC
TTTAGGAATGAACAAAGTATTCCTTCACTTACTCAGTGGAAGAACAAAGGTGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400054575
PEP Infomation

pacid=37452650 transcript=PGSC0003DMT400080467 locus=PGSC0003DMG400031326 ID=PGSC0003DMT400080467.v4.03 annot-version=v4.03
Sequence

MKISWFSFIFVLVVLSSASWSALADNHEEFIQCLSHSNQTSSNIYTPNNSSFPSILQFSI
QNLRFNTTETPKPLVIVTPVSESEVQRVILCSKKTGMHVRVRGAGHDYEGLSYVSEVPFV
IVDLINLRTINVDVNDKSAWVEAGSTIGELYYRIAEKSKTLGFPAGVCPTVGVGGHFSGG
GYGVMLRKYGLAADNIVDARLIDANGRILDRVSMGEDLFWAIRGGGGNTFGLVLAWKIKL
VDVPEIVTVFTLDKTLEQNATKLVHRWQYVAPRFHEDLFIRILVSKLNSSNQGDGNNQQT
IVASFNSIFLGGIDRLLPIMKENFPELGLRREDCIEMSWIESIMYFAGFPTDGPLDVLLS
RVQLSTRYFKAKSDYVYQPIPEGGLEGIWRFFFEDEAQSSQVILSPYGGRMDEISPSAIP
FPHRAGNLYKIQHLVYWDEEGEEVAERHISWIRRLYSYMAPFVSKLPRAAYINYRDLDIG
VNNIKGYTSYVQAKVWGIKYFKNNFDRLVHVKTKVDPSNFFRNEQSIPSLTQWKNKGE*

Transcript Sequence

Transcript ID

PGSC0003DMT400080467
Transcript Infomation

pacid=37452650 locus=PGSC0003DMG400031326 ID=PGSC0003DMT400080467.v4.03 annot-version=v4.03
Sequence

ATGAAGATTTCTTGGTTTTCCTTTATTTTTGTACTTGTTGTTCTCTCATCAGCTTCATGG
TCAGCATTAGCTGATAATCATGAAGAATTCATTCAATGTCTATCTCATAGTAACCAAACA
TCCTCCAATATTTACACACCAAATAACTCTTCTTTTCCATCAATCCTTCAATTCTCCATA
CAAAATCTACGGTTCAATACAACTGAAACTCCTAAACCTCTTGTGATTGTCACCCCAGTG
AGTGAATCCGAGGTCCAACGAGTCATTCTTTGTTCTAAGAAAACTGGGATGCACGTTAGG
GTTCGTGGTGCAGGACATGATTATGAAGGTCTTTCTTATGTCTCCGAGGTTCCATTCGTT
ATAGTTGACCTTATTAACCTTAGAACAATCAATGTTGATGTCAATGATAAGAGTGCATGG
GTTGAAGCTGGATCAACTATTGGTGAACTCTATTATAGAATCGCGGAGAAAAGCAAAACC
CTAGGGTTTCCGGCTGGTGTTTGTCCAACAGTTGGTGTTGGTGGACATTTTAGTGGAGGT
GGTTATGGTGTTATGCTGAGAAAATATGGCCTAGCAGCTGATAACATTGTAGATGCACGA
TTGATCGATGCCAATGGGAGGATTCTTGATAGGGTTTCCATGGGGGAAGATCTATTTTGG
GCAATTAGAGGAGGTGGTGGTAATACTTTTGGACTTGTCCTTGCATGGAAGATCAAATTA
GTAGATGTTCCTGAGATAGTAACTGTTTTCACACTTGACAAGACATTGGAACAAAATGCC
ACTAAGCTTGTTCATAGGTGGCAATATGTTGCTCCAAGATTCCATGAAGATTTGTTCATT
AGGATCTTGGTTAGTAAATTGAACTCAAGTAATCAAGGAGATGGTAACAACCAACAAACA
ATTGTAGCTTCATTCAACTCCATATTCCTTGGTGGTATCGATCGATTACTTCCCATCATG
AAAGAAAATTTCCCTGAATTAGGGTTGAGAAGAGAAGATTGCATTGAGATGAGTTGGATA
GAGTCTATAATGTACTTTGCAGGGTTCCCAACAGATGGACCTCTTGATGTCTTGCTAAGT
AGGGTTCAACTCTCAACGCGTTACTTCAAGGCAAAATCAGACTACGTGTATCAGCCAATT
CCAGAGGGAGGTCTTGAAGGAATATGGAGATTCTTCTTTGAAGATGAAGCTCAATCATCT
CAAGTAATCTTAAGTCCCTATGGTGGGAGGATGGATGAGATTTCACCATCCGCTATCCCG
TTCCCCCATAGAGCTGGGAATTTATACAAAATTCAACATTTGGTGTATTGGGATGAAGAA
GGAGAAGAAGTAGCTGAGAGGCATATAAGTTGGATAAGAAGGCTTTACTCTTACATGGCA
CCTTTTGTTTCTAAGTTACCAAGAGCTGCTTATATCAACTATAGGGATCTTGATATTGGA
GTGAATAACATCAAGGGATATACAAGCTATGTGCAAGCTAAGGTTTGGGGGATTAAGTAT
TTCAAGAATAATTTTGATAGATTGGTTCATGTGAAGACTAAGGTGGATCCTTCAAATTTC
TTTAGGAATGAACAAAGTATTCCTTCACTTACTCAGTGGAAGAACAAAGGTGAATGA