Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080457
CDS Infomation

pacid=37451255 polypeptide=PGSC0003DMP400054571 locus=PGSC0003DMG400031323 ID=PGSC0003DMT400080457.v4.03 annot-version=v4.03
Sequence

ATGATGAATGTTTTCGCCATTTCTCTTGTACTTACCACACTTGTTACAGCAGGGGTTTTT
TCTCCGAATCCAGAGAAGAAAGATGACGTTATTGTTAAAGATGGTCATAGAGTTGTAGTT
GTTGAGTATGAGCCAAATGATGGACAAACTAAGGTATCAATTTCTCCACCTGAAACAGAG
CATAAAGAGAAAACAGGGCATGTTTCAGTTTCAGATGTTAAAAATAAATTATCAGAAAAA
GCAGAGGAAATTGAAGAAAAAATTGGTAGGTTTCATGGGATGAATGCTAGAGAACTTGTT
TGTGATGCTTATGGGAAGTGCAAACATAAGATAGCAAGTGCACTTGAAGGGACTAAAGAC
TCTGTTACTGAAAAGATGCATGAAATTCAAGAAGATGCTAAAGAGGGGTTTGAGAAAGTG
ACTGGCAAAGCCCATGAGGCAAAAGAAACTGTTGGGAAGAAAGTGGATGAGGTGAAACAA
GGGGCTAAAGAAACGGCTGAGAAAGTTAAAATAAAAGCAGTTGACACGACAAGTACACTG
AAAAATCATTTGATGAAGAATGCTTCGGAAGATCTTGATTTGATTGAAGAGAAGGTGAAA
GAAGATGCACAAAGGCTTAAAGTGGAAGTCAAAAGAGACTATCATGTTGGTCGTAGGTTT
TTGTCAGCATACATCTTCTCAGCCAAGAGCTTTAGATCTTTGATGGGAATAATTCATTTG
CTGGGATTTGCATTGTCTTATGGGGTTTCTGTTTGGATGACTTTCATATCGAGTAATATC
TTGGCAAGAGCTTTGCCGAAGCAGCAATTTGCAATGGTACAGAGCAAGATTTACCCTGCT
TACTTCAAAACTATGTATTATGGCATCGCTACGGCGTTTTTGGGCCATATGTTGAGCCAG
ATGCTTCCATATTATGCGAATCGGACTGAAAAAATCCAAGGTCTCATTTTTCTGGCCATA
TTCTCCATGACTTTGTTCAATTGTTTCTACTTGGAGCCTCGAGCCACTAAGGTGATGAGG
GAGAGAATGAAAATAGAGAAAGAGGAAGGAAAAGGGAAAGACGTTTTCAACGTAGAACCA
AGCACATCAAGTGTAGATGCTTTCGAGGATCCAACAGGTATTAAAACAGGTAAATCAACA
ACTCATGAACCTCTTGAAACCCAACAAGAGTTGTCAGAGGAAACAGCAAGATTGAAACCA
CAAGTTGAAAGATTAAGTCAGAGGCTAAAGAAGTTTAATGTAATCTCATCATTACTCAAT
TCACTCACACTAATGGGTCTCTCATATCACCTTGTTTATCTTAGCCAACTCCTCCATTCC
AACCCTTATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400054571
PEP Infomation

pacid=37451255 transcript=PGSC0003DMT400080457 locus=PGSC0003DMG400031323 ID=PGSC0003DMT400080457.v4.03 annot-version=v4.03
Sequence

MMNVFAISLVLTTLVTAGVFSPNPEKKDDVIVKDGHRVVVVEYEPNDGQTKVSISPPETE
HKEKTGHVSVSDVKNKLSEKAEEIEEKIGRFHGMNARELVCDAYGKCKHKIASALEGTKD
SVTEKMHEIQEDAKEGFEKVTGKAHEAKETVGKKVDEVKQGAKETAEKVKIKAVDTTSTL
KNHLMKNASEDLDLIEEKVKEDAQRLKVEVKRDYHVGRRFLSAYIFSAKSFRSLMGIIHL
LGFALSYGVSVWMTFISSNILARALPKQQFAMVQSKIYPAYFKTMYYGIATAFLGHMLSQ
MLPYYANRTEKIQGLIFLAIFSMTLFNCFYLEPRATKVMRERMKIEKEEGKGKDVFNVEP
STSSVDAFEDPTGIKTGKSTTHEPLETQQELSEETARLKPQVERLSQRLKKFNVISSLLN
SLTLMGLSYHLVYLSQLLHSNPY*

Transcript Sequence

Transcript ID

PGSC0003DMT400080457
Transcript Infomation

pacid=37451255 locus=PGSC0003DMG400031323 ID=PGSC0003DMT400080457.v4.03 annot-version=v4.03
Sequence

ATGATGAATGTTTTCGCCATTTCTCTTGTACTTACCACACTTGTTACAGCAGGGGTTTTT
TCTCCGAATCCAGAGAAGAAAGATGACGTTATTGTTAAAGATGGTCATAGAGTTGTAGTT
GTTGAGTATGAGCCAAATGATGGACAAACTAAGGTATCAATTTCTCCACCTGAAACAGAG
CATAAAGAGAAAACAGGGCATGTTTCAGTTTCAGATGTTAAAAATAAATTATCAGAAAAA
GCAGAGGAAATTGAAGAAAAAATTGGTAGGTTTCATGGGATGAATGCTAGAGAACTTGTT
TGTGATGCTTATGGGAAGTGCAAACATAAGATAGCAAGTGCACTTGAAGGGACTAAAGAC
TCTGTTACTGAAAAGATGCATGAAATTCAAGAAGATGCTAAAGAGGGGTTTGAGAAAGTG
ACTGGCAAAGCCCATGAGGCAAAAGAAACTGTTGGGAAGAAAGTGGATGAGGTGAAACAA
GGGGCTAAAGAAACGGCTGAGAAAGTTAAAATAAAAGCAGTTGACACGACAAGTACACTG
AAAAATCATTTGATGAAGAATGCTTCGGAAGATCTTGATTTGATTGAAGAGAAGGTGAAA
GAAGATGCACAAAGGCTTAAAGTGGAAGTCAAAAGAGACTATCATGTTGGTCGTAGGTTT
TTGTCAGCATACATCTTCTCAGCCAAGAGCTTTAGATCTTTGATGGGAATAATTCATTTG
CTGGGATTTGCATTGTCTTATGGGGTTTCTGTTTGGATGACTTTCATATCGAGTAATATC
TTGGCAAGAGCTTTGCCGAAGCAGCAATTTGCAATGGTACAGAGCAAGATTTACCCTGCT
TACTTCAAAACTATGTATTATGGCATCGCTACGGCGTTTTTGGGCCATATGTTGAGCCAG
ATGCTTCCATATTATGCGAATCGGACTGAAAAAATCCAAGGTCTCATTTTTCTGGCCATA
TTCTCCATGACTTTGTTCAATTGTTTCTACTTGGAGCCTCGAGCCACTAAGGTGATGAGG
GAGAGAATGAAAATAGAGAAAGAGGAAGGAAAAGGGAAAGACGTTTTCAACGTAGAACCA
AGCACATCAAGTGTAGATGCTTTCGAGGATCCAACAGGTATTAAAACAGGTAAATCAACA
ACTCATGAACCTCTTGAAACCCAACAAGAGTTGTCAGAGGAAACAGCAAGATTGAAACCA
CAAGTTGAAAGATTAAGTCAGAGGCTAAAGAAGTTTAATGTAATCTCATCATTACTCAAT
TCACTCACACTAATGGGTCTCTCATATCACCTTGTTTATCTTAGCCAACTCCTCCATTCC
AACCCTTATTAA