Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080452
CDS Infomation

pacid=37453563 polypeptide=PGSC0003DMP400054567 locus=PGSC0003DMG401031322 ID=PGSC0003DMT400080452.v4.03 annot-version=v4.03
Sequence

ATGGCCAACGGAGTCACCATCTCCGACGCCGAGACCCCGTTTCTCAGCGACGTCGTTGAA
GGCTCCGTTGACTATAAGGGTCGTCCGGTGACCCGATCCAAATCCGGTGGTTGGAGATCC
GCATCTTTCATCATAGGCGTGGAGGTTGCAGAGAGATTTGCATATTATGGGATAGGTTCA
AACCTAATAAGCTACTTAACGGGGCCACTAGGCCAGTCAGTTGCATCGGCAGCGGAGAAT
GTAAATGTTTGGAGTGGAACGGCATCGCTTCTTCCACTTTTGGGTGCATTTATTGCTGAC
TCATATCTGGGTCGGTATCGGACCATTATCATATCCTCTGTGCTCTACATCCTGGGACTT
GGCTTCCTGACGCTTTCAACTGTTCTCCCTTCCAGTCATTCTGACTGCCAAGATACTGCA
ACATGTTCTCCTCCCAAGTTCCAGATTATTTTCTTCTTCTTTTCTTTGTATCTAGTAGCT
TTTGGACAGGGAGGGCACAAGCCTTGTGTGCAAGCTTTTGGAGCGGACCAATTTGATGCT
CAAGACCCAGAGGAAAGTAAAGCTAAAAGCTCATTCTTCAATTGGTGGTATTTTGGAATG
TGTGGTGGGTTGTTCATGACTCTCTGTATATTGAACTACGTTCAAGATAATCTTAGCTGG
GGTCTGGGATTTGGAATTCCCTGTATTGTCATGGGTCTCGCACTTGTTGTTTTCTTGCTT
GGAAGCTTCACTTATCGGTTTCGCCAAAGCAGTGATGAAAAGAACCCATTTAATAGAATT
GGTAATGTGTTCATTAATGCAGCTAGGAATTGGCAAACAACCACTTCAGCTATATCAGTG
GAACAAGAAGTTCAGGGTATTCTGCCTCATGAAGGTTCTGAACAATTCAAGTTCCTCAAC
AAAGCGTTGCTCGCACCCAATGGTTCCAAGGAAAATGGGAAAATTTGCAGTATCAGTGAG
GTTGAGGAGGCTAAGGCTATTCTTAGGTTGATTCCAATATGGACAACATGTTTGGTATAT
GCTATTGTGTTCTCACAGTCATCTACTTTATTCACCAAGCAAGGTGCAACTATGGACAGA
TCTCTTGGTTCAAATTTTGAAGTACCAGCTGCCTCATTACAATCTTTCATTAGCCTCTCT
GTTGTCATTTTTATTCCTATATATGACCGTATTTTGGTTCCCGTTGCAAGAGCTATAACT
GGGAAACCATCAGGCATAACAATGCTCCAAAGAATTGGAACTGGCATTTTCTTGTCTATA
CTTTCAATGGTGGTTGCGGCTATAATTGAGAAGAAACGTCTCCAAACTGCTTTAGAACAC
GGTCTGGTCGACATGCCAAAGGCAACAGTTCCCATGAGCATTTGCTGGTTAATACCTCAG
TATATACTATTTGGTATTTCCGATGTATTCACCATGGTTGGTCTGCAGGAGTTCTTCTAT
GATCAGGTGCCAGTTGAGTTGAAAAGTATAGGTCTTTCTCTCTACCTCAGCATTTTTGGC
ATAGGGAGCTTCTTGAGCAGTTTCCTTATCTCTGTTACTGAGAACATCACTGGGAAAGAT
GGTCAGACCAGTTGGTTTTCTGACAACTTGAATCGGGCGCATCTGGATTACTTCTATTGG
GTTCTTGCTGTACTAAGTACCATCGCATTCACAGCGTACTTGTATTTTTCAAGATCTTAT
ATATACAATAAGTCAAGTTCTCTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400054567
PEP Infomation

pacid=37453563 transcript=PGSC0003DMT400080452 locus=PGSC0003DMG401031322 ID=PGSC0003DMT400080452.v4.03 annot-version=v4.03
Sequence

MANGVTISDAETPFLSDVVEGSVDYKGRPVTRSKSGGWRSASFIIGVEVAERFAYYGIGS
NLISYLTGPLGQSVASAAENVNVWSGTASLLPLLGAFIADSYLGRYRTIIISSVLYILGL
GFLTLSTVLPSSHSDCQDTATCSPPKFQIIFFFFSLYLVAFGQGGHKPCVQAFGADQFDA
QDPEESKAKSSFFNWWYFGMCGGLFMTLCILNYVQDNLSWGLGFGIPCIVMGLALVVFLL
GSFTYRFRQSSDEKNPFNRIGNVFINAARNWQTTTSAISVEQEVQGILPHEGSEQFKFLN
KALLAPNGSKENGKICSISEVEEAKAILRLIPIWTTCLVYAIVFSQSSTLFTKQGATMDR
SLGSNFEVPAASLQSFISLSVVIFIPIYDRILVPVARAITGKPSGITMLQRIGTGIFLSI
LSMVVAAIIEKKRLQTALEHGLVDMPKATVPMSICWLIPQYILFGISDVFTMVGLQEFFY
DQVPVELKSIGLSLYLSIFGIGSFLSSFLISVTENITGKDGQTSWFSDNLNRAHLDYFYW
VLAVLSTIAFTAYLYFSRSYIYNKSSSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400080452
Transcript Infomation

pacid=37453563 locus=PGSC0003DMG401031322 ID=PGSC0003DMT400080452.v4.03 annot-version=v4.03
Sequence

ATGGCCAACGGAGTCACCATCTCCGACGCCGAGACCCCGTTTCTCAGCGACGTCGTTGAA
GGCTCCGTTGACTATAAGGGTCGTCCGGTGACCCGATCCAAATCCGGTGGTTGGAGATCC
GCATCTTTCATCATAGGCGTGGAGGTTGCAGAGAGATTTGCATATTATGGGATAGGTTCA
AACCTAATAAGCTACTTAACGGGGCCACTAGGCCAGTCAGTTGCATCGGCAGCGGAGAAT
GTAAATGTTTGGAGTGGAACGGCATCGCTTCTTCCACTTTTGGGTGCATTTATTGCTGAC
TCATATCTGGGTCGGTATCGGACCATTATCATATCCTCTGTGCTCTACATCCTGGGACTT
GGCTTCCTGACGCTTTCAACTGTTCTCCCTTCCAGTCATTCTGACTGCCAAGATACTGCA
ACATGTTCTCCTCCCAAGTTCCAGATTATTTTCTTCTTCTTTTCTTTGTATCTAGTAGCT
TTTGGACAGGGAGGGCACAAGCCTTGTGTGCAAGCTTTTGGAGCGGACCAATTTGATGCT
CAAGACCCAGAGGAAAGTAAAGCTAAAAGCTCATTCTTCAATTGGTGGTATTTTGGAATG
TGTGGTGGGTTGTTCATGACTCTCTGTATATTGAACTACGTTCAAGATAATCTTAGCTGG
GGTCTGGGATTTGGAATTCCCTGTATTGTCATGGGTCTCGCACTTGTTGTTTTCTTGCTT
GGAAGCTTCACTTATCGGTTTCGCCAAAGCAGTGATGAAAAGAACCCATTTAATAGAATT
GGTAATGTGTTCATTAATGCAGCTAGGAATTGGCAAACAACCACTTCAGCTATATCAGTG
GAACAAGAAGTTCAGGGTATTCTGCCTCATGAAGGTTCTGAACAATTCAAGTTCCTCAAC
AAAGCGTTGCTCGCACCCAATGGTTCCAAGGAAAATGGGAAAATTTGCAGTATCAGTGAG
GTTGAGGAGGCTAAGGCTATTCTTAGGTTGATTCCAATATGGACAACATGTTTGGTATAT
GCTATTGTGTTCTCACAGTCATCTACTTTATTCACCAAGCAAGGTGCAACTATGGACAGA
TCTCTTGGTTCAAATTTTGAAGTACCAGCTGCCTCATTACAATCTTTCATTAGCCTCTCT
GTTGTCATTTTTATTCCTATATATGACCGTATTTTGGTTCCCGTTGCAAGAGCTATAACT
GGGAAACCATCAGGCATAACAATGCTCCAAAGAATTGGAACTGGCATTTTCTTGTCTATA
CTTTCAATGGTGGTTGCGGCTATAATTGAGAAGAAACGTCTCCAAACTGCTTTAGAACAC
GGTCTGGTCGACATGCCAAAGGCAACAGTTCCCATGAGCATTTGCTGGTTAATACCTCAG
TATATACTATTTGGTATTTCCGATGTATTCACCATGGTTGGTCTGCAGGAGTTCTTCTAT
GATCAGGTGCCAGTTGAGTTGAAAAGTATAGGTCTTTCTCTCTACCTCAGCATTTTTGGC
ATAGGGAGCTTCTTGAGCAGTTTCCTTATCTCTGTTACTGAGAACATCACTGGGAAAGAT
GGTCAGACCAGTTGGTTTTCTGACAACTTGAATCGGGCGCATCTGGATTACTTCTATTGG
GTTCTTGCTGTACTAAGTACCATCGCATTCACAGCGTACTTGTATTTTTCAAGATCTTAT
ATATACAATAAGTCAAGTTCTCTCTAA