Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080381
CDS Infomation

pacid=37458694 polypeptide=PGSC0003DMP400054532 locus=PGSC0003DMG400031299 ID=PGSC0003DMT400080381.v4.03 annot-version=v4.03
Sequence

ATGTACTCAACATTGTCTATAAGGAATTTGGGTATAGAGGAAAGTGGGGATTTTTTCAAT
CATCATATGAATCATAATCTTCAGGGTTCTCTTTCAGTTGATGGTACAAATTTGCCTGGT
GATTCTTGTTTAGTTTTATCAACTGATCCTAAGCCTCGTCTTAGGTGGACAACTGAACTC
CATGAAAGGTTTCTTGATGCTGTTACTCAACTTGGTGGTCCTGATAAAGCAACGCCAAAA
ACAATTATGAGAACAATGGGGGTGAAAGGTCTGACCTTATACCATTTGAAGTCACATCTC
CAGAAATACCGCATGGGGAAGCAATCTGCTAAGGAGGCAACTGAGAATTCTAAAGACGTA
TCATGTCCGGCCGAGAGTCAAGATACAGGTTCCTCTACATCAGGTTCATCCAGAGTTATT
GTGCAAGATATAAATGAAGGCTTACAAGTAACCGAGGCTTTACGAGTACAGATGGAAGTC
CAGCGAAGACTACATGAGCAGCTAGAGGTACAACGCCATCTACAGCTTCGTATAGAGGCA
CAAGGAAAATACTTGCAATCAATTCTTGAAAAGGCCTGTAAAGCTTTCAATAGCCAGTCC
CTCGAATCGAATGGCCTAGAAATGAACAGAGAAGAGCTCTCTGAATTAGCATTCATCAAT
GGCCCTTCATTACCCGATATTGGCCCGAGTTTTGAGAACAAGAATGCATGTCACGTCCCT
GCCAGACTAGGCGATTGCTTGCTTGACGACTGCTTGCCATCAAATGGAATCGGTGGTCTA
AAGAAGAGACCGCGAGGTTTTACTAACGTTAATGGATTGCCTATGGAAAGCAATACAAGG
GAAGTGGAATGGATGATGAGTAATATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400054532
PEP Infomation

pacid=37458694 transcript=PGSC0003DMT400080381 locus=PGSC0003DMG400031299 ID=PGSC0003DMT400080381.v4.03 annot-version=v4.03
Sequence

MYSTLSIRNLGIEESGDFFNHHMNHNLQGSLSVDGTNLPGDSCLVLSTDPKPRLRWTTEL
HERFLDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRMGKQSAKEATENSKDV
SCPAESQDTGSSTSGSSRVIVQDINEGLQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEA
QGKYLQSILEKACKAFNSQSLESNGLEMNREELSELAFINGPSLPDIGPSFENKNACHVP
ARLGDCLLDDCLPSNGIGGLKKRPRGFTNVNGLPMESNTREVEWMMSNI*

Transcript Sequence

Transcript ID

PGSC0003DMT400080381
Transcript Infomation

pacid=37458694 locus=PGSC0003DMG400031299 ID=PGSC0003DMT400080381.v4.03 annot-version=v4.03
Sequence

ATGTACTCAACATTGTCTATAAGGAATTTGGGTATAGAGGAAAGTGGGGATTTTTTCAAT
CATCATATGAATCATAATCTTCAGGGTTCTCTTTCAGTTGATGGTACAAATTTGCCTGGT
GATTCTTGTTTAGTTTTATCAACTGATCCTAAGCCTCGTCTTAGGTGGACAACTGAACTC
CATGAAAGGTTTCTTGATGCTGTTACTCAACTTGGTGGTCCTGATAAAGCAACGCCAAAA
ACAATTATGAGAACAATGGGGGTGAAAGGTCTGACCTTATACCATTTGAAGTCACATCTC
CAGAAATACCGCATGGGGAAGCAATCTGCTAAGGAGGCAACTGAGAATTCTAAAGACGTA
TCATGTCCGGCCGAGAGTCAAGATACAGGTTCCTCTACATCAGGTTCATCCAGAGTTATT
GTGCAAGATATAAATGAAGGCTTACAAGTAACCGAGGCTTTACGAGTACAGATGGAAGTC
CAGCGAAGACTACATGAGCAGCTAGAGGTACAACGCCATCTACAGCTTCGTATAGAGGCA
CAAGGAAAATACTTGCAATCAATTCTTGAAAAGGCCTGTAAAGCTTTCAATAGCCAGTCC
CTCGAATCGAATGGCCTAGAAATGAACAGAGAAGAGCTCTCTGAATTAGCATTCATCAAT
GGCCCTTCATTACCCGATATTGGCCCGAGTTTTGAGAACAAGAATGCATGTCACGTCCCT
GCCAGACTAGGCGATTGCTTGCTTGACGACTGCTTGCCATCAAATGGAATCGGTGGTCTA
AAGAAGAGACCGCGAGGTTTTACTAACGTTAATGGATTGCCTATGGAAAGCAATACAAGG
GAAGTGGAATGGATGATGAGTAATATATGA