Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080377
CDS Infomation

pacid=37455185 polypeptide=PGSC0003DMP400054528 locus=PGSC0003DMG400031296 ID=PGSC0003DMT400080377.v4.03 annot-version=v4.03
Sequence

ATGAAGTATTTTGGGGTTGTGGGGTCAATCTTGATTTGGTTTTTGGTTTTTGTTAGCTTT
GTTGAGGTTAATAAGGGTCAAATTCTAACTACACTTGATGGACCTTTTAAGCCAGTGACT
GTTCCTTTGGACCAAAGTTTTAGGGGACATGCTGTAGATTTGCCAGACACTGATTCTAGA
GTTCAAAGGACTGTTGAAGGATTTGAACCTGAGCAGATATCTGTTTCCCTTTCTGCTAGT
TATCACTCTGTTTGGATTTCTTGGATTACTGGGGAATATCAAATTGGCGACAATATTAAA
CCATTGGATCCAAGTAAAGTTGGTAGTGTTGTTCAATATGGGAAAGATAAATCCTATTTA
AGACGCAAAGCAATTGGCCAGTCCGTTATTTATAATCAACTTTATCCATTTGAAGGACTT
CAAAACTACACTTCTGGTATTATACACCATGTCCAACTTACAGGATTGAAACCGGACACA
TTATACTATTATCGATGTGGAGACCCTTCTATACCAGCTATGAGTACTATCTATCATTTC
AAGACCATGCCTATTTCGTCTCCAAAGAGTTATCCGAAGAGAATAGCAATTGTAGGGGAC
CTTGGTCTTACATACAATACAACTTCTACAATTAACCATTTGACGGGAAACAATCCAGAT
CTTGTTCTATTAGTGGGAGATGTTACGTATGCTAACTTGTATCTCACTAATGGAACTGGT
TCAGATTGCTATTCATGCTCATTTCCCGACACTCCAATACATGAGACATATCAACCTCGG
TGGGACTATTGGGGAAGATATATGCAGCCGTTGGTGTCCAAAATTCCCATCATGGTGTTG
GAGGGGAACCATGAGATAGAAGAACAAGCTGAAAATCAGACATTTGCAGCGTATCGTTCT
CGCTTTGCTTTCCCATCAAAAGAGAGTGGATCATCATCCCAGTTATACTATTCTTTTAAT
GCGGGAGGCATACACTTCATCATGCTTGGGGGATATGTCGCCTATAATAAATCAGATGAT
CAATACAAGTGGTTGGAGAAGGACCTGGCTAACGTTGATAGGACAGTTACTCCATGGCTA
GTTGCCACTTGGCATCCACCTTGGTACTCTACTTACACAGCACACTATCGAGAAGCTGAA
TGTATGAAGGTAGCGATGGAAGAGTTGTTGTACGAGTATGGTGTCGATTTAGTCTTCAAT
GGACATGTTCATGCCTATGAAAGGTCCAACAGAGTCTATAACTACACACTGGATCCTTGC
GGTCTAGTCCATATAACTGTAGGTGATGGTGGAAACCGCGAGAAGATGGCGATAGAACAC
GCTGATGAGCCAGGAAAATGTCCTGAACCATCTAGCACACCGGACAAATTTATGGGTGGA
TTCTGTGCCTATAATTTTACATCAGGTCCAGCAGCCGGCAACTTCTGCTGGGATCAACAA
CCTGAATATAGTGCATATAGAGAAAGTAGCTTCGGCCATGGAATACTCGAGGTGAAAAAT
GAGACACATGCTCTATGGACATGGCATAGGAACCAAGATATGTACAATAAAGCTGGAGAT
ATAATTTACGTAGTGAGACAACCAGAGAAATGTCCTATTAAACCAAAGGTAATTAAGCCC
TGGTTAATACAAAATTACAAATTTGATTTGATAAAAAAATTAATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400054528
PEP Infomation

pacid=37455185 transcript=PGSC0003DMT400080377 locus=PGSC0003DMG400031296 ID=PGSC0003DMT400080377.v4.03 annot-version=v4.03
Sequence

MKYFGVVGSILIWFLVFVSFVEVNKGQILTTLDGPFKPVTVPLDQSFRGHAVDLPDTDSR
VQRTVEGFEPEQISVSLSASYHSVWISWITGEYQIGDNIKPLDPSKVGSVVQYGKDKSYL
RRKAIGQSVIYNQLYPFEGLQNYTSGIIHHVQLTGLKPDTLYYYRCGDPSIPAMSTIYHF
KTMPISSPKSYPKRIAIVGDLGLTYNTTSTINHLTGNNPDLVLLVGDVTYANLYLTNGTG
SDCYSCSFPDTPIHETYQPRWDYWGRYMQPLVSKIPIMVLEGNHEIEEQAENQTFAAYRS
RFAFPSKESGSSSQLYYSFNAGGIHFIMLGGYVAYNKSDDQYKWLEKDLANVDRTVTPWL
VATWHPPWYSTYTAHYREAECMKVAMEELLYEYGVDLVFNGHVHAYERSNRVYNYTLDPC
GLVHITVGDGGNREKMAIEHADEPGKCPEPSSTPDKFMGGFCAYNFTSGPAAGNFCWDQQ
PEYSAYRESSFGHGILEVKNETHALWTWHRNQDMYNKAGDIIYVVRQPEKCPIKPKVIKP
WLIQNYKFDLIKKLI*

Transcript Sequence

Transcript ID

PGSC0003DMT400080377
Transcript Infomation

pacid=37455185 locus=PGSC0003DMG400031296 ID=PGSC0003DMT400080377.v4.03 annot-version=v4.03
Sequence

ATGAAGTATTTTGGGGTTGTGGGGTCAATCTTGATTTGGTTTTTGGTTTTTGTTAGCTTT
GTTGAGGTTAATAAGGGTCAAATTCTAACTACACTTGATGGACCTTTTAAGCCAGTGACT
GTTCCTTTGGACCAAAGTTTTAGGGGACATGCTGTAGATTTGCCAGACACTGATTCTAGA
GTTCAAAGGACTGTTGAAGGATTTGAACCTGAGCAGATATCTGTTTCCCTTTCTGCTAGT
TATCACTCTGTTTGGATTTCTTGGATTACTGGGGAATATCAAATTGGCGACAATATTAAA
CCATTGGATCCAAGTAAAGTTGGTAGTGTTGTTCAATATGGGAAAGATAAATCCTATTTA
AGACGCAAAGCAATTGGCCAGTCCGTTATTTATAATCAACTTTATCCATTTGAAGGACTT
CAAAACTACACTTCTGGTATTATACACCATGTCCAACTTACAGGATTGAAACCGGACACA
TTATACTATTATCGATGTGGAGACCCTTCTATACCAGCTATGAGTACTATCTATCATTTC
AAGACCATGCCTATTTCGTCTCCAAAGAGTTATCCGAAGAGAATAGCAATTGTAGGGGAC
CTTGGTCTTACATACAATACAACTTCTACAATTAACCATTTGACGGGAAACAATCCAGAT
CTTGTTCTATTAGTGGGAGATGTTACGTATGCTAACTTGTATCTCACTAATGGAACTGGT
TCAGATTGCTATTCATGCTCATTTCCCGACACTCCAATACATGAGACATATCAACCTCGG
TGGGACTATTGGGGAAGATATATGCAGCCGTTGGTGTCCAAAATTCCCATCATGGTGTTG
GAGGGGAACCATGAGATAGAAGAACAAGCTGAAAATCAGACATTTGCAGCGTATCGTTCT
CGCTTTGCTTTCCCATCAAAAGAGAGTGGATCATCATCCCAGTTATACTATTCTTTTAAT
GCGGGAGGCATACACTTCATCATGCTTGGGGGATATGTCGCCTATAATAAATCAGATGAT
CAATACAAGTGGTTGGAGAAGGACCTGGCTAACGTTGATAGGACAGTTACTCCATGGCTA
GTTGCCACTTGGCATCCACCTTGGTACTCTACTTACACAGCACACTATCGAGAAGCTGAA
TGTATGAAGGTAGCGATGGAAGAGTTGTTGTACGAGTATGGTGTCGATTTAGTCTTCAAT
GGACATGTTCATGCCTATGAAAGGTCCAACAGAGTCTATAACTACACACTGGATCCTTGC
GGTCTAGTCCATATAACTGTAGGTGATGGTGGAAACCGCGAGAAGATGGCGATAGAACAC
GCTGATGAGCCAGGAAAATGTCCTGAACCATCTAGCACACCGGACAAATTTATGGGTGGA
TTCTGTGCCTATAATTTTACATCAGGTCCAGCAGCCGGCAACTTCTGCTGGGATCAACAA
CCTGAATATAGTGCATATAGAGAAAGTAGCTTCGGCCATGGAATACTCGAGGTGAAAAAT
GAGACACATGCTCTATGGACATGGCATAGGAACCAAGATATGTACAATAAAGCTGGAGAT
ATAATTTACGTAGTGAGACAACCAGAGAAATGTCCTATTAAACCAAAGGTAATTAAGCCC
TGGTTAATACAAAATTACAAATTTGATTTGATAAAAAAATTAATCTAA