Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080363
CDS Infomation

pacid=37455837 polypeptide=PGSC0003DMP400054517 locus=PGSC0003DMG400031289 ID=PGSC0003DMT400080363.v4.03 annot-version=v4.03
Sequence

ATGGTGAAAAAGGCTAAAAGAAAGGCTAGAGGTGGTGCGAAGGAGAGGCAGAATCATGTG
GCATCTCCAAATCCCATCGCTCAACAAGACACTCAAAACGTTAATGCACCTGAGGATGGA
GTTACAGCTGTGAATGAGAAAAAGACATGCCCCCATATTGATAAGGGTATTGATGTGGAG
AAAGTCTCTGCTAAACTTGGCTCTTCAGGACCTGTTAGGTGTGAAGATTGCAGGGAAGGA
GCAGATAATCGACGGGCTGCTAAAGGAAAAGGTAAACATGGAAAAAAGAAGGGAGGTGGA
GAATCAAAGTCCGCATCTAAAGCCATTTGGGTCTGTTTAGAATGTGGTCATTTTTCGTGC
GGAGGTGCTGGATTTCCTACTACTCCTCAGAGCCATGCAGTTCGGCATGCAAGACAGTAC
CACCACCACTTGGCTGTACAATTTGAAAATCCTCAGTTGCGATGGTGTTTCCCGTGCGAT
AGACTAATTCCTGCTGAAAAGGTAGAGCATGGCACTGAACAAAAGGATGTATTTCAGGAC
ATTGCCAAGATGATTAAAGGGCGGCCATCTGAAGGGCCTAGTCTTGATGCTGAGGATGTT
TGGTTTGGGAGGGGGAGTATCACAAGCGGGATCAAGTCAGAGGCTAGTCTTGATATTGGT
GCCTACGGGAAAAGTGGCTACATTGTTAGGGGATTGCATAATTTAGGGAACACTTGCTTT
TTCAATTCAATAATTCAAAACCTACTAGCAGTGAATAGATTACGGGGTTACTTTCTTGAA
CTGGACGAATGTGATGGTCCTCTTGCTGCTGCTTTTAAAAAGCTCTTTACTGAGACAAGT
ATTGGGGATGCCTCAAGAAGTGCTATAAATCCAAAATCCTTTTTTGGTTCTCTGTGTGCG
AAGGCTCCACAGTTTAGGGGATATCAGCAGCACGACAGTCACGAGTTGCTTCATTGTTTG
CTTGACGGTTTGGGTACCGAAGAATTGACTGCCAGAAAGAAACTCAAGTCTTCTCAGGAT
CATGGCAAGTCTCCTACTTATGTCGATGCTATCTTTGGGGGTCGTCTCTCTAGTACTGTT
ACTTGTCTGGAGTGTGGACACTCTTCATTAGTCTATGAGCCATTCTTGGATCTCTCATTA
CCGGTTCCCACTAAGAAGACTCCGTCTAAAAAAGCTCAACTAGTTTCCCGTGTGAAGAAG
GCAAAACATGCTCCAAAGAGAAGTGGAAGAGTGCGCCTCAAAATTAACAGAGATGCAGCT
TCTTTTAATTCTCAAAGTGCTCAAGAAAGCGGTAGCAAGTCGTTCTGCCAGGTACAGTCT
AGTGCGCCCATCGCTGAGGGAACGGAAGTTCCTTCTGATTGTGCATTAGTAGATTCTCTT
GATGCTAGTTCTATGGCTGATGATATGGGCTTAACTTCACATAATATATATTCCTCTTTG
AAGTCTAAAAATGAGAAAAATGTCGACAATGTTACTGGGCAGCCGACTTCAGAGGACAAT
TTTTCATGGTTGGATTATCTTGATCAAGATGTCCTGCCTAATGGTAATGAACAAAATGAC
GATTGTGTTACTGGACAGTCGACTTCAATGGACAATTTTACATGTTCGGAGTATCTTGAT
CAAGATATTATGCCTAAGGGTGATGACGTCGCATCACAAGCTGATATTCTGTCTAATCAG
GGTTGTGCAGCTGAAAACATTGTTCAACCTAATGTGTCCTTGCAAAATGATCTGAATGCT
CCTAGTGACAGTAAATTGACATTTGGTGAGGAAGCTTGTTCTCCAGATGATTTAATGCGC
TTGGATGATCAAGGACAATCTAAGTCACCAGACTGCAATATAGCTTCTCAATTTGGTGAA
GAAGTAGAAGTTAAAGATTGGAATGCTAGAGAAGTTGAGCATAACTCAGCATCAAGCAGC
CGGTTCCTCTCAGTGGATTCAAATCTTGATTCATCAGCAAGGCTCGAGGAAGTTGAAGCC
CCATTACAGGTAAAAGATTCAGAAATTCTGTTGCTTCCATATAAAGAAGAAACCTCAACT
ACCAATGATGTACTAAAAGGAGAAAGCGAGGTGTCCCCAGATGCTGCTGGCTGTGAACAA
GATCTTTTGGACTTTGATGGTTTTGGTGGCCTGTTTAATGAACCTGAGCCGGTTGCAGGG
CCGGCTGAAAAGCCTTTACTAAGTGGTGCTGCTTCTATGGCAAATGGATTCGGAGAAGCT
AGTTCTGCTATTGGAAATAGCTCTGAATCTGATCCAGATGAGGTTGATAGTACTGATGCT
CCAGTGTCAGTGGAGAGTTGTTTGGCTTGTTTCACAAAGCCTGAGCTTCTATCTAAAACA
GAGCATGCTTGGCAATGTGAAAACTGTGCAAAACTTTTACGAGAACAGAGGATGAGATTG
AAGAAGAAATTGCTGAAACCTGAATCAGGGGATCTGGGGAATGCACCAGAGGATAGTAAT
TCAAGGGAAATTGATCAGAGAGCCACTGATGGAAGTCCCGGTAAAGGTTTGTCAGATGCT
TTTGATGGCAGGTTGGTGTACCAAAATGGAACAAATGGTTACTCGAACTGCATGCCAGAA
ACTAGCCACGGAGCTGACGAAGATCCAGTCTCTCACCCATCAGAAGGTGGGGTTCATTCA
AGTCAGGATGAAGCTTGTAGTCTAGTAAATTGCGATAATCAGAACAATGGAGTTCAGTTG
GATGAACGTTCTGCTAATTATGAATCTGGTGAAAGTGAGAACGAGACAGACTCTAAAGGT
GTCAAAGTGGAAAGAGATGCAACTAAAAGGATACTCATTGATAAAGCCCCTCCTATTTTG
ACAATTCATCTAAAGAGGTTCAGCCAAGATGCTCGCGGACGCTTAAGTAAGCTGAGTGGC
CACGTGAATTTCAGAGATACTATTGATCTCACAACCTTTGTTGATCCCAGGTGCCTGCAA
AGGGAGGTTTACAAATACCGGCTTGTAGGTGTCGTGGAACATTCAGGGACTATGAGAGGA
GGTCACTATGTTGCATATGTTAGAGGAGGCCCAAAGATTGCTGGGAAAGAGAAGGACGCG
GAAGATTATGTGTGGTATTATGCCAGTGATGCCTACGTACGAGAGGTCCCATTGGAAGAA
GTTCTTCGAAGTGAAGCCTATATTTTGTTCTACGAAGAAATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400054517
PEP Infomation

pacid=37455837 transcript=PGSC0003DMT400080363 locus=PGSC0003DMG400031289 ID=PGSC0003DMT400080363.v4.03 annot-version=v4.03
Sequence

MVKKAKRKARGGAKERQNHVASPNPIAQQDTQNVNAPEDGVTAVNEKKTCPHIDKGIDVE
KVSAKLGSSGPVRCEDCREGADNRRAAKGKGKHGKKKGGGESKSASKAIWVCLECGHFSC
GGAGFPTTPQSHAVRHARQYHHHLAVQFENPQLRWCFPCDRLIPAEKVEHGTEQKDVFQD
IAKMIKGRPSEGPSLDAEDVWFGRGSITSGIKSEASLDIGAYGKSGYIVRGLHNLGNTCF
FNSIIQNLLAVNRLRGYFLELDECDGPLAAAFKKLFTETSIGDASRSAINPKSFFGSLCA
KAPQFRGYQQHDSHELLHCLLDGLGTEELTARKKLKSSQDHGKSPTYVDAIFGGRLSSTV
TCLECGHSSLVYEPFLDLSLPVPTKKTPSKKAQLVSRVKKAKHAPKRSGRVRLKINRDAA
SFNSQSAQESGSKSFCQVQSSAPIAEGTEVPSDCALVDSLDASSMADDMGLTSHNIYSSL
KSKNEKNVDNVTGQPTSEDNFSWLDYLDQDVLPNGNEQNDDCVTGQSTSMDNFTCSEYLD
QDIMPKGDDVASQADILSNQGCAAENIVQPNVSLQNDLNAPSDSKLTFGEEACSPDDLMR
LDDQGQSKSPDCNIASQFGEEVEVKDWNAREVEHNSASSSRFLSVDSNLDSSARLEEVEA
PLQVKDSEILLLPYKEETSTTNDVLKGESEVSPDAAGCEQDLLDFDGFGGLFNEPEPVAG
PAEKPLLSGAASMANGFGEASSAIGNSSESDPDEVDSTDAPVSVESCLACFTKPELLSKT
EHAWQCENCAKLLREQRMRLKKKLLKPESGDLGNAPEDSNSREIDQRATDGSPGKGLSDA
FDGRLVYQNGTNGYSNCMPETSHGADEDPVSHPSEGGVHSSQDEACSLVNCDNQNNGVQL
DERSANYESGESENETDSKGVKVERDATKRILIDKAPPILTIHLKRFSQDARGRLSKLSG
HVNFRDTIDLTTFVDPRCLQREVYKYRLVGVVEHSGTMRGGHYVAYVRGGPKIAGKEKDA
EDYVWYYASDAYVREVPLEEVLRSEAYILFYEEI*

Transcript Sequence

Transcript ID

PGSC0003DMT400080363
Transcript Infomation

pacid=37455837 locus=PGSC0003DMG400031289 ID=PGSC0003DMT400080363.v4.03 annot-version=v4.03
Sequence

ATGGTGAAAAAGGCTAAAAGAAAGGCTAGAGGTGGTGCGAAGGAGAGGCAGAATCATGTG
GCATCTCCAAATCCCATCGCTCAACAAGACACTCAAAACGTTAATGCACCTGAGGATGGA
GTTACAGCTGTGAATGAGAAAAAGACATGCCCCCATATTGATAAGGGTATTGATGTGGAG
AAAGTCTCTGCTAAACTTGGCTCTTCAGGACCTGTTAGGTGTGAAGATTGCAGGGAAGGA
GCAGATAATCGACGGGCTGCTAAAGGAAAAGGTAAACATGGAAAAAAGAAGGGAGGTGGA
GAATCAAAGTCCGCATCTAAAGCCATTTGGGTCTGTTTAGAATGTGGTCATTTTTCGTGC
GGAGGTGCTGGATTTCCTACTACTCCTCAGAGCCATGCAGTTCGGCATGCAAGACAGTAC
CACCACCACTTGGCTGTACAATTTGAAAATCCTCAGTTGCGATGGTGTTTCCCGTGCGAT
AGACTAATTCCTGCTGAAAAGGTAGAGCATGGCACTGAACAAAAGGATGTATTTCAGGAC
ATTGCCAAGATGATTAAAGGGCGGCCATCTGAAGGGCCTAGTCTTGATGCTGAGGATGTT
TGGTTTGGGAGGGGGAGTATCACAAGCGGGATCAAGTCAGAGGCTAGTCTTGATATTGGT
GCCTACGGGAAAAGTGGCTACATTGTTAGGGGATTGCATAATTTAGGGAACACTTGCTTT
TTCAATTCAATAATTCAAAACCTACTAGCAGTGAATAGATTACGGGGTTACTTTCTTGAA
CTGGACGAATGTGATGGTCCTCTTGCTGCTGCTTTTAAAAAGCTCTTTACTGAGACAAGT
ATTGGGGATGCCTCAAGAAGTGCTATAAATCCAAAATCCTTTTTTGGTTCTCTGTGTGCG
AAGGCTCCACAGTTTAGGGGATATCAGCAGCACGACAGTCACGAGTTGCTTCATTGTTTG
CTTGACGGTTTGGGTACCGAAGAATTGACTGCCAGAAAGAAACTCAAGTCTTCTCAGGAT
CATGGCAAGTCTCCTACTTATGTCGATGCTATCTTTGGGGGTCGTCTCTCTAGTACTGTT
ACTTGTCTGGAGTGTGGACACTCTTCATTAGTCTATGAGCCATTCTTGGATCTCTCATTA
CCGGTTCCCACTAAGAAGACTCCGTCTAAAAAAGCTCAACTAGTTTCCCGTGTGAAGAAG
GCAAAACATGCTCCAAAGAGAAGTGGAAGAGTGCGCCTCAAAATTAACAGAGATGCAGCT
TCTTTTAATTCTCAAAGTGCTCAAGAAAGCGGTAGCAAGTCGTTCTGCCAGGTACAGTCT
AGTGCGCCCATCGCTGAGGGAACGGAAGTTCCTTCTGATTGTGCATTAGTAGATTCTCTT
GATGCTAGTTCTATGGCTGATGATATGGGCTTAACTTCACATAATATATATTCCTCTTTG
AAGTCTAAAAATGAGAAAAATGTCGACAATGTTACTGGGCAGCCGACTTCAGAGGACAAT
TTTTCATGGTTGGATTATCTTGATCAAGATGTCCTGCCTAATGGTAATGAACAAAATGAC
GATTGTGTTACTGGACAGTCGACTTCAATGGACAATTTTACATGTTCGGAGTATCTTGAT
CAAGATATTATGCCTAAGGGTGATGACGTCGCATCACAAGCTGATATTCTGTCTAATCAG
GGTTGTGCAGCTGAAAACATTGTTCAACCTAATGTGTCCTTGCAAAATGATCTGAATGCT
CCTAGTGACAGTAAATTGACATTTGGTGAGGAAGCTTGTTCTCCAGATGATTTAATGCGC
TTGGATGATCAAGGACAATCTAAGTCACCAGACTGCAATATAGCTTCTCAATTTGGTGAA
GAAGTAGAAGTTAAAGATTGGAATGCTAGAGAAGTTGAGCATAACTCAGCATCAAGCAGC
CGGTTCCTCTCAGTGGATTCAAATCTTGATTCATCAGCAAGGCTCGAGGAAGTTGAAGCC
CCATTACAGGTAAAAGATTCAGAAATTCTGTTGCTTCCATATAAAGAAGAAACCTCAACT
ACCAATGATGTACTAAAAGGAGAAAGCGAGGTGTCCCCAGATGCTGCTGGCTGTGAACAA
GATCTTTTGGACTTTGATGGTTTTGGTGGCCTGTTTAATGAACCTGAGCCGGTTGCAGGG
CCGGCTGAAAAGCCTTTACTAAGTGGTGCTGCTTCTATGGCAAATGGATTCGGAGAAGCT
AGTTCTGCTATTGGAAATAGCTCTGAATCTGATCCAGATGAGGTTGATAGTACTGATGCT
CCAGTGTCAGTGGAGAGTTGTTTGGCTTGTTTCACAAAGCCTGAGCTTCTATCTAAAACA
GAGCATGCTTGGCAATGTGAAAACTGTGCAAAACTTTTACGAGAACAGAGGATGAGATTG
AAGAAGAAATTGCTGAAACCTGAATCAGGGGATCTGGGGAATGCACCAGAGGATAGTAAT
TCAAGGGAAATTGATCAGAGAGCCACTGATGGAAGTCCCGGTAAAGGTTTGTCAGATGCT
TTTGATGGCAGGTTGGTGTACCAAAATGGAACAAATGGTTACTCGAACTGCATGCCAGAA
ACTAGCCACGGAGCTGACGAAGATCCAGTCTCTCACCCATCAGAAGGTGGGGTTCATTCA
AGTCAGGATGAAGCTTGTAGTCTAGTAAATTGCGATAATCAGAACAATGGAGTTCAGTTG
GATGAACGTTCTGCTAATTATGAATCTGGTGAAAGTGAGAACGAGACAGACTCTAAAGGT
GTCAAAGTGGAAAGAGATGCAACTAAAAGGATACTCATTGATAAAGCCCCTCCTATTTTG
ACAATTCATCTAAAGAGGTTCAGCCAAGATGCTCGCGGACGCTTAAGTAAGCTGAGTGGC
CACGTGAATTTCAGAGATACTATTGATCTCACAACCTTTGTTGATCCCAGGTGCCTGCAA
AGGGAGGTTTACAAATACCGGCTTGTAGGTGTCGTGGAACATTCAGGGACTATGAGAGGA
GGTCACTATGTTGCATATGTTAGAGGAGGCCCAAAGATTGCTGGGAAAGAGAAGGACGCG
GAAGATTATGTGTGGTATTATGCCAGTGATGCCTACGTACGAGAGGTCCCATTGGAAGAA
GTTCTTCGAAGTGAAGCCTATATTTTGTTCTACGAAGAAATTTGA