Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080360
CDS Infomation

pacid=37454919 polypeptide=PGSC0003DMP400054515 locus=PGSC0003DMG400031288 ID=PGSC0003DMT400080360.v4.03 annot-version=v4.03
Sequence

ATGGCATCATCTTCTGCTGAAAATAGTCCAGTGCCACTCAGAGTAGCACCCCCAAATTAT
CATCCATATCCACCTCCCTTGGTTACATATGAGAATGTTGTTGCCTCTCCTCAACTGTTC
ATGGAAACTTTGCAGAAGCTCCATGCTGACATGAGAACCAAGTTCATGATCCCTGTTATA
GGGGGCAAAGCGCTGGATCTGCATCGCCTCTTTGTCGAGGTAACTACTCGTGGTGGTCTC
TCAAAGGTTCTAGAGGAGAAAAGATGGAAGGAAGTAACATTAGTGTTTAGCTTTCCTTCT
TCAGCCACAAATGCTTCATTTATTCTTCGGAAATACTATATTTCATTGCTATTTCACTAC
GAAAGACTCTACTATTTCAAGGCAAAGTACTGGACTCCTTCTCCTGACGTGTTGCAGGAA
GCCTCCCGTACTTCAGCTCCACCTCAAGGTTTGGCCGGATATATCCTTCCACCACCAGAA
ATAGAAGCTGCCGTGCCCCAGCCGCGGAGGATAGAAACAACATTTCCTGAAGAAACTACC
ATACCATCGACAGGTTCACCTGTGTCTGGTTTCATTGACGGAAAGTTTGAGAGTGGATAT
CTTATTACGGTGAAGATTGGATCCGAGGATCTTAAAGGTGTTCTATATCAGGTTCCAATG
AACCAAATGCACCAAGAGTTGCAAAATCAGAATCTACCTGCTTACAACACTCGGAAAGAA
GCATCAACACCTGGGGTAGTTCGAAGAAAGCGTAGGAAGAAAGGTGAAATCAAAAAGCGC
GACCCTTCCCATCCCAAGCCTAACAGAAGTGGTTATAACTTTTTCTTTGCAGAACAACAT
GCCCGTCTGAAACCTCTTTATCCTGGAAAGGATAGAGAGATTAGTAGGATGATAGGTGAA
TTGTGGAACAATCTGAACGTACCAGAGAAGATGGTCTATCAGGAGAGAGCATTGCAAGAC
AAAGAACGATACAGAATGGAGATGCAGGACTATCGCGAGAGACTAACAGCTGGACAAATT
GTTAGCAGTCCACTGCTAATACAATCTTCTCTTGAACACAATGTCGATATGATTGATCAG
CAAAGTGAACCTCAAAGTGAAAATGGAAACGTCTCTTGGAGTCCAGAGCACGGAACAAGT
TCTGATAAATGTGCACAGAGCAACTCGGAGAACAACAACAACAAAGGCACAGACCCTCCA
GTATTGGAAATGCAGACAAACAACGTGATCGTTGAGGAATTTGAGTTGCTTAAGAGAGTA
GACATGGTCGAGTGCGAGGATAAAGAAATGCAGGAAGAAGAAGTTGAAGGTGATAAACAA
GAAGAATTACAACATAGCAAGGAAAAAGTTTTTTTCTTCCTAGAAGAAAAAACTTTGTTG
CCAACTGAAGGGAAAATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400054515
PEP Infomation

pacid=37454919 transcript=PGSC0003DMT400080360 locus=PGSC0003DMG400031288 ID=PGSC0003DMT400080360.v4.03 annot-version=v4.03
Sequence

MASSSAENSPVPLRVAPPNYHPYPPPLVTYENVVASPQLFMETLQKLHADMRTKFMIPVI
GGKALDLHRLFVEVTTRGGLSKVLEEKRWKEVTLVFSFPSSATNASFILRKYYISLLFHY
ERLYYFKAKYWTPSPDVLQEASRTSAPPQGLAGYILPPPEIEAAVPQPRRIETTFPEETT
IPSTGSPVSGFIDGKFESGYLITVKIGSEDLKGVLYQVPMNQMHQELQNQNLPAYNTRKE
ASTPGVVRRKRRKKGEIKKRDPSHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGE
LWNNLNVPEKMVYQERALQDKERYRMEMQDYRERLTAGQIVSSPLLIQSSLEHNVDMIDQ
QSEPQSENGNVSWSPEHGTSSDKCAQSNSENNNNKGTDPPVLEMQTNNVIVEEFELLKRV
DMVECEDKEMQEEEVEGDKQEELQHSKEKVFFFLEEKTLLPTEGKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400080360
Transcript Infomation

pacid=37454919 locus=PGSC0003DMG400031288 ID=PGSC0003DMT400080360.v4.03 annot-version=v4.03
Sequence

ATGGCATCATCTTCTGCTGAAAATAGTCCAGTGCCACTCAGAGTAGCACCCCCAAATTAT
CATCCATATCCACCTCCCTTGGTTACATATGAGAATGTTGTTGCCTCTCCTCAACTGTTC
ATGGAAACTTTGCAGAAGCTCCATGCTGACATGAGAACCAAGTTCATGATCCCTGTTATA
GGGGGCAAAGCGCTGGATCTGCATCGCCTCTTTGTCGAGGTAACTACTCGTGGTGGTCTC
TCAAAGGTTCTAGAGGAGAAAAGATGGAAGGAAGTAACATTAGTGTTTAGCTTTCCTTCT
TCAGCCACAAATGCTTCATTTATTCTTCGGAAATACTATATTTCATTGCTATTTCACTAC
GAAAGACTCTACTATTTCAAGGCAAAGTACTGGACTCCTTCTCCTGACGTGTTGCAGGAA
GCCTCCCGTACTTCAGCTCCACCTCAAGGTTTGGCCGGATATATCCTTCCACCACCAGAA
ATAGAAGCTGCCGTGCCCCAGCCGCGGAGGATAGAAACAACATTTCCTGAAGAAACTACC
ATACCATCGACAGGTTCACCTGTGTCTGGTTTCATTGACGGAAAGTTTGAGAGTGGATAT
CTTATTACGGTGAAGATTGGATCCGAGGATCTTAAAGGTGTTCTATATCAGGTTCCAATG
AACCAAATGCACCAAGAGTTGCAAAATCAGAATCTACCTGCTTACAACACTCGGAAAGAA
GCATCAACACCTGGGGTAGTTCGAAGAAAGCGTAGGAAGAAAGGTGAAATCAAAAAGCGC
GACCCTTCCCATCCCAAGCCTAACAGAAGTGGTTATAACTTTTTCTTTGCAGAACAACAT
GCCCGTCTGAAACCTCTTTATCCTGGAAAGGATAGAGAGATTAGTAGGATGATAGGTGAA
TTGTGGAACAATCTGAACGTACCAGAGAAGATGGTCTATCAGGAGAGAGCATTGCAAGAC
AAAGAACGATACAGAATGGAGATGCAGGACTATCGCGAGAGACTAACAGCTGGACAAATT
GTTAGCAGTCCACTGCTAATACAATCTTCTCTTGAACACAATGTCGATATGATTGATCAG
CAAAGTGAACCTCAAAGTGAAAATGGAAACGTCTCTTGGAGTCCAGAGCACGGAACAAGT
TCTGATAAATGTGCACAGAGCAACTCGGAGAACAACAACAACAAAGGCACAGACCCTCCA
GTATTGGAAATGCAGACAAACAACGTGATCGTTGAGGAATTTGAGTTGCTTAAGAGAGTA
GACATGGTCGAGTGCGAGGATAAAGAAATGCAGGAAGAAGAAGTTGAAGGTGATAAACAA
GAAGAATTACAACATAGCAAGGAAAAAGTTTTTTTCTTCCTAGAAGAAAAAACTTTGTTG
CCAACTGAAGGGAAAATATAA