Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080327
CDS Infomation

pacid=37442689 polypeptide=PGSC0003DMP400054495 locus=PGSC0003DMG400031271 ID=PGSC0003DMT400080327.v4.03 annot-version=v4.03
Sequence

ATGATGCAAGATGTTTGGACTCAGTTGGGTCCAACCATTGCAGCAATCATGTTCACCTGG
ACCATGTACCAGAACTACTTTCCTCACGAACTTCGTGGTCATATTAGGAGGTATACCGAT
AAACTCGTTAGCTATTTCTATCCTTATATGCACATTATCTTTTATGAACTTGAAACTGAA
GGGTGGTTTGAGCGGAGCAAAGCTTACGTAGCGATTGAAAGGTACCTTAGCAAGAACTCG
AGCACTCAAGCTAAGCGTCTCAAAGCCAACGCGGTGAAGGATGGTCAATCGCTTGTTCTA
ACCATGGATGATCATGAGGAGATAATCGATGAATATAAAGGCGAGAAGGTTTGGTGGATT
TCGAGCCAAAAACCAGCCAGCAGACAGATAATATCTCTTCATAGGGAGGATGAGAAGAGG
TATTTCAAGCTAAAATTTCACAAAAAGAATCGCGACCTTATCACAAATTCATACTTGAAG
TATGTGTTGGATGAAGGAAAGGCGATATCTGTGAAAGAACGACAGCGAAAGCTGTACACA
AACAATAAGGGAGATGGAGGTGGTTATAGATACAGGGGAGGAAGGATGTGGAGTGGAGTA
GTATTTGAGCATCCGTCAACATTTGATACTCTAGCTATGGATCCAAACAAGAAGCAAGAG
ATTATAGATGATCTCGAAACATTTAGCAAGTCAAAAGACTACTATGCAAAGATTGGCAAG
GCGTGGAAGCGTGGTTATCTTCTTTATGGTCCTCCAGGAACCGGTAAATCTAGCATGATT
GCTGCTATGGCTAATTTCTTGAAGTATGACGTCTATGATCTTGAGCTGACATCGGTTAAG
GACAATACCGAGCTAAGAAAACTGCTGATAGATACAACAGGTAAATCTATTATTGTGATT
GAAGATATAGATTGTTCCCTTGACCTTACAGGTCAACGAGAGACGAATAAGAAGAAGAAA
GAAGAGGAGGATAAAGGAAAAACTGAGGAAGATGCCGTCAAGGAGAAGATGAAAAAGGGA
GGAGAGGTGAAAGAAAAGCAAAGTGAGGTAACTTTATCTGGACTTTTGAACTTCATTGAT
GGTCTATGGTCAGCTATTGGCGGTGAAAGGCTTATCGTCTTCACTACCAACTATGTGGAA
AAGCTTGATCCTGCTCTAATTAGGAGGGGGAGGATGGATAAACATATTGTCCTATCCTAC
TGTTGCTTTGAGTCATTCAAAGTTCTTGCACATAACTATCTTGACGTCGTTGAATCTCAT
GTTCACTTTCCTGAGATTCGTCGTTTATTGGAGGAAACTAATATTACTCCTGCTGATATT
GCTGAGAATTTGATGCCTAAGTCTTCAAAGGAAAATGCAGACACTTGTTTGGAGAGATTG
ATTAAAGCTCTTGAAACTGCAAAAGAGGAAGCGAAACTGAAGGCTGAGGAAGAAGAGAAA
GCAAAGGCGGCTGAGAAGGAGAAGGAAGAGAAAGATCGCGAGGAAAAGAAAGAAGTAACA
GCTACTGAAGAAGCTAAGAATGCTGACAGTGTAAACGAAAAAGATAATGGTGTTAAGGAA
AATGGTGATGCTAGCAAAGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400054495
PEP Infomation

pacid=37442689 transcript=PGSC0003DMT400080327 locus=PGSC0003DMG400031271 ID=PGSC0003DMT400080327.v4.03 annot-version=v4.03
Sequence

MMQDVWTQLGPTIAAIMFTWTMYQNYFPHELRGHIRRYTDKLVSYFYPYMHIIFYELETE
GWFERSKAYVAIERYLSKNSSTQAKRLKANAVKDGQSLVLTMDDHEEIIDEYKGEKVWWI
SSQKPASRQIISLHREDEKRYFKLKFHKKNRDLITNSYLKYVLDEGKAISVKERQRKLYT
NNKGDGGGYRYRGGRMWSGVVFEHPSTFDTLAMDPNKKQEIIDDLETFSKSKDYYAKIGK
AWKRGYLLYGPPGTGKSSMIAAMANFLKYDVYDLELTSVKDNTELRKLLIDTTGKSIIVI
EDIDCSLDLTGQRETNKKKKEEEDKGKTEEDAVKEKMKKGGEVKEKQSEVTLSGLLNFID
GLWSAIGGERLIVFTTNYVEKLDPALIRRGRMDKHIVLSYCCFESFKVLAHNYLDVVESH
VHFPEIRRLLEETNITPADIAENLMPKSSKENADTCLERLIKALETAKEEAKLKAEEEEK
AKAAEKEKEEKDREEKKEVTATEEAKNADSVNEKDNGVKENGDASKD*

Transcript Sequence

Transcript ID

PGSC0003DMT400080327
Transcript Infomation

pacid=37442689 locus=PGSC0003DMG400031271 ID=PGSC0003DMT400080327.v4.03 annot-version=v4.03
Sequence

ATGATGCAAGATGTTTGGACTCAGTTGGGTCCAACCATTGCAGCAATCATGTTCACCTGG
ACCATGTACCAGAACTACTTTCCTCACGAACTTCGTGGTCATATTAGGAGGTATACCGAT
AAACTCGTTAGCTATTTCTATCCTTATATGCACATTATCTTTTATGAACTTGAAACTGAA
GGGTGGTTTGAGCGGAGCAAAGCTTACGTAGCGATTGAAAGGTACCTTAGCAAGAACTCG
AGCACTCAAGCTAAGCGTCTCAAAGCCAACGCGGTGAAGGATGGTCAATCGCTTGTTCTA
ACCATGGATGATCATGAGGAGATAATCGATGAATATAAAGGCGAGAAGGTTTGGTGGATT
TCGAGCCAAAAACCAGCCAGCAGACAGATAATATCTCTTCATAGGGAGGATGAGAAGAGG
TATTTCAAGCTAAAATTTCACAAAAAGAATCGCGACCTTATCACAAATTCATACTTGAAG
TATGTGTTGGATGAAGGAAAGGCGATATCTGTGAAAGAACGACAGCGAAAGCTGTACACA
AACAATAAGGGAGATGGAGGTGGTTATAGATACAGGGGAGGAAGGATGTGGAGTGGAGTA
GTATTTGAGCATCCGTCAACATTTGATACTCTAGCTATGGATCCAAACAAGAAGCAAGAG
ATTATAGATGATCTCGAAACATTTAGCAAGTCAAAAGACTACTATGCAAAGATTGGCAAG
GCGTGGAAGCGTGGTTATCTTCTTTATGGTCCTCCAGGAACCGGTAAATCTAGCATGATT
GCTGCTATGGCTAATTTCTTGAAGTATGACGTCTATGATCTTGAGCTGACATCGGTTAAG
GACAATACCGAGCTAAGAAAACTGCTGATAGATACAACAGGTAAATCTATTATTGTGATT
GAAGATATAGATTGTTCCCTTGACCTTACAGGTCAACGAGAGACGAATAAGAAGAAGAAA
GAAGAGGAGGATAAAGGAAAAACTGAGGAAGATGCCGTCAAGGAGAAGATGAAAAAGGGA
GGAGAGGTGAAAGAAAAGCAAAGTGAGGTAACTTTATCTGGACTTTTGAACTTCATTGAT
GGTCTATGGTCAGCTATTGGCGGTGAAAGGCTTATCGTCTTCACTACCAACTATGTGGAA
AAGCTTGATCCTGCTCTAATTAGGAGGGGGAGGATGGATAAACATATTGTCCTATCCTAC
TGTTGCTTTGAGTCATTCAAAGTTCTTGCACATAACTATCTTGACGTCGTTGAATCTCAT
GTTCACTTTCCTGAGATTCGTCGTTTATTGGAGGAAACTAATATTACTCCTGCTGATATT
GCTGAGAATTTGATGCCTAAGTCTTCAAAGGAAAATGCAGACACTTGTTTGGAGAGATTG
ATTAAAGCTCTTGAAACTGCAAAAGAGGAAGCGAAACTGAAGGCTGAGGAAGAAGAGAAA
GCAAAGGCGGCTGAGAAGGAGAAGGAAGAGAAAGATCGCGAGGAAAAGAAAGAAGTAACA
GCTACTGAAGAAGCTAAGAATGCTGACAGTGTAAACGAAAAAGATAATGGTGTTAAGGAA
AATGGTGATGCTAGCAAAGATTGA