Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080320
CDS Infomation

pacid=37443481 polypeptide=PGSC0003DMP400054488 locus=PGSC0003DMG400031270 ID=PGSC0003DMT400080320.v4.03 annot-version=v4.03
Sequence

ATGGCTGGCAATTTATGTATAACTCTCACTCAATCTTTACCCTTTTCACCAAAACTTTAT
TCATCAAAACCCCTTCTTCAGAAATCACATAGAATCTCTATTGCCCCATTGACCCCATTT
CTCAAATTTCAAGATTCAGCTGCTAGTCAAGCTTCTACTAGAGGGTTCACTACTATATGC
TTTTCTAGTCCCAGAAATGGTCCTGATTATAAAGGAGGTGGACCTGATTGGCCAATTTTG
AGACGCTGGGATGTGCCATGGAATTGGCAAACTGTTTCACTTTCTTCGCTTGCATGTGGA
TTAAGTTTTGTTTTGACAGGACTAATAGAGACAGCATCAATACCATATGTAGGACTTGAT
GTAGAAGCATTGAGCTTGGATGAGAAGGCTGAAATTTTGTTCGCTGATCAAGCTATAACA
ACTGCAGTTGTGCTAATAGTCCTTTATACTCTCACCAAGTCATCTCAACCACTTCCTGAT
GACATATATCGTTATGATCTGAAGGAACCTTTCAATCTCCAGAGAGGATGGCTTTTGTGG
GCTGGAATTGGTCTAGCGGGAGCAATAGGTGCAATTGCTTTAACAGGAGTGGCAATGTCT
GCTTTCAATGGTGAGCCGCCACAAAGAGAGACTGATGCGCTTGCTCGGTTACTCCCATTG
ATAGGTTCCTCAAGTATCAGCACTGCTTCTCTGCTAGGCATTACTGGTGTACTTGCTCCA
ATTCTTGAGGAGACCGTGTTTAGAGGTTTTTTTATGGTATCTCTGACTAAGTGGGTACCT
ACACCGCTTGCAGTGGTTATTAGTGGTGCTGTATTTGCTCTTGCACATCTCACTCCTGGA
CAATTTCCTCAGTTGTTTGTTCTTGGGACTGCTCTGGGATTTTCTTATGCTCAGACGCGG
AACCTCCTAACCCCAATCACAATTCATGCTTTATGGAACTCTGGTGTTATTTTGCTTCTG
ACCTTCCTTCAGCTCCAAGGCTATGATATCAGGGAAATAATACAAGGAACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400054488
PEP Infomation

pacid=37443481 transcript=PGSC0003DMT400080320 locus=PGSC0003DMG400031270 ID=PGSC0003DMT400080320.v4.03 annot-version=v4.03
Sequence

MAGNLCITLTQSLPFSPKLYSSKPLLQKSHRISIAPLTPFLKFQDSAASQASTRGFTTIC
FSSPRNGPDYKGGGPDWPILRRWDVPWNWQTVSLSSLACGLSFVLTGLIETASIPYVGLD
VEALSLDEKAEILFADQAITTAVVLIVLYTLTKSSQPLPDDIYRYDLKEPFNLQRGWLLW
AGIGLAGAIGAIALTGVAMSAFNGEPPQRETDALARLLPLIGSSSISTASLLGITGVLAP
ILEETVFRGFFMVSLTKWVPTPLAVVISGAVFALAHLTPGQFPQLFVLGTALGFSYAQTR
NLLTPITIHALWNSGVILLLTFLQLQGYDIREIIQGT*

Transcript Sequence

Transcript ID

PGSC0003DMT400080320
Transcript Infomation

pacid=37443481 locus=PGSC0003DMG400031270 ID=PGSC0003DMT400080320.v4.03 annot-version=v4.03
Sequence

ATGGCTGGCAATTTATGTATAACTCTCACTCAATCTTTACCCTTTTCACCAAAACTTTAT
TCATCAAAACCCCTTCTTCAGAAATCACATAGAATCTCTATTGCCCCATTGACCCCATTT
CTCAAATTTCAAGATTCAGCTGCTAGTCAAGCTTCTACTAGAGGGTTCACTACTATATGC
TTTTCTAGTCCCAGAAATGGTCCTGATTATAAAGGAGGTGGACCTGATTGGCCAATTTTG
AGACGCTGGGATGTGCCATGGAATTGGCAAACTGTTTCACTTTCTTCGCTTGCATGTGGA
TTAAGTTTTGTTTTGACAGGACTAATAGAGACAGCATCAATACCATATGTAGGACTTGAT
GTAGAAGCATTGAGCTTGGATGAGAAGGCTGAAATTTTGTTCGCTGATCAAGCTATAACA
ACTGCAGTTGTGCTAATAGTCCTTTATACTCTCACCAAGTCATCTCAACCACTTCCTGAT
GACATATATCGTTATGATCTGAAGGAACCTTTCAATCTCCAGAGAGGATGGCTTTTGTGG
GCTGGAATTGGTCTAGCGGGAGCAATAGGTGCAATTGCTTTAACAGGAGTGGCAATGTCT
GCTTTCAATGGTGAGCCGCCACAAAGAGAGACTGATGCGCTTGCTCGGTTACTCCCATTG
ATAGGTTCCTCAAGTATCAGCACTGCTTCTCTGCTAGGCATTACTGGTGTACTTGCTCCA
ATTCTTGAGGAGACCGTGTTTAGAGGTTTTTTTATGGTATCTCTGACTAAGTGGGTACCT
ACACCGCTTGCAGTGGTTATTAGTGGTGCTGTATTTGCTCTTGCACATCTCACTCCTGGA
CAATTTCCTCAGTTGTTTGTTCTTGGGACTGCTCTGGGATTTTCTTATGCTCAGACGCGG
AACCTCCTAACCCCAATCACAATTCATGCTTTATGGAACTCTGGTGTTATTTTGCTTCTG
ACCTTCCTTCAGCTCCAAGGCTATGATATCAGGGAAATAATACAAGGAACTTGA