Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080300
CDS Infomation

pacid=37445321 polypeptide=PGSC0003DMP400054477 locus=PGSC0003DMG400031262 ID=PGSC0003DMT400080300.v4.03 annot-version=v4.03
Sequence

ATGGCGGGCAAAAACTCAGGGGATAATAGGACTAGGACTTCTGTATCAATATTTATAATA
GCTGGTCTATGCTGCTTCTTCTATTTACTTGGAGCATGGCAAAGAAGTGGGTTTGGGAAA
GGAGATAGTATAGCAGTGGCTGTCACCAAGACTGCTGGCGAGAATTGCGATATCCTACCA
AATCTCAATTTTGAAACTCGTCATGCTGGCGAAGCAGGCGGTACTGATGAGCCGGAAGAA
GTCGAGGAACTCAAGCCATGTGATCCTCAGTACACTGATTATACACCATGTCAAGATCAA
AAGCGTGCTATGACTTTCCCAAGGGAAAATATGAACTACCGAGAAAGGCATTGTCCACCT
CAAGAAGAGAAGTTACATTGCCTTATTCCAGCACCTAAGGGATATGTTACCCCATTTCCG
TGGCCAAAAAGTCGGGATTATGTTCCCTATGCCAATGCTCCATATAAGAGCTTGACTGTT
GAGAAGGCCATTCAGAACTGGGTTCAATATGAGGGTAACGTGTTTAGATTCCCAGGAGGA
GGGACACAATTCCCTCAAGGAGCAGATAAGTATATTGATCAGCTTGCTTCAGTTGTCCCA
ATCGAAAATGGGACAGTTCGGACTGCTTTGGACACTGGTTGTGGGGTTGCAAGTTGGGGT
GCTTATCTTTGGAAAAGAAATGTCATAGCAATGTCATTTGCCCCAAGAGACTCACATGAA
GCTCAGGTTCAGTTTGCTCTGGAAAGGGGTGTGCCTGCTGTTATTGGTGTACTAGGAACA
ATCAAAATGCCATATCCATCTAAAGCCTTTGATATGGCCCATTGTTCTCGTTGTCTAATC
CCATGGGGAGCTGCTGATGGAATCCTCATGATGGAAGTTGACCGAGTTCTTAGACCTGGA
GGCTACTGGGTGCTTTCTGGACCTCCTATCAACTGGAAGGTCAATTTTAAGGCCTGGCAA
CGCCCCAAGGAGGATCTTGAGGAAGAACAAAGGAAGATTGAAGAGGCTGCTAAACTTCTT
TGCTGGGAGAAGATATCTGAAAAGGGAGAGACTGCCATTTGGCAGAAAAGAAAGGATAGT
GCCTCATGCCGTTCTGCACAAGAAAATTCTGCAGCCAGAGTTTGTAAACCTTCTGATCCA
GATAGTGTCTGGTACAACAAAATGGAAATGTGCATAACACCAAACAATGGTAATGGTGGA
GACGAGAGTCTAAAGCCATTCCCTGAGAGACTTTATGCTGTTCCTCCAAGAATTGCCAAT
GGATTAGTTTCTGGAGTGTCTGTTGCGAAATATCAAGAAGACAGCAAGAAATGGAAGAAA
CACGTAAGTGCTTATAAGAAGATCAACAAACTCCTGGACACTGGAAGGTACCGCAACATT
ATGGACATGAATGCTGGACTAGGAGGTTTTGCAGCAGCACTTCACAATCCCAAGTTTTGG
GTTATGAATGTTATGCCAACAATAGCTGAGAAGAATACTTTGGGGGTTATATTTGAACGG
GGACTGATTGGTATCTATCATGACTGGTGTGAAGCATTTTCTACATACCCGAGGACATAT
GATCTCATTCATGCTAGTGGCCTTTTCAGTTTATACAAGGACAAGTGTGAATTTGAAGAC
ATTCTCTTAGAGATGGACCGTATTTTGCGTCCAGAAGGAGCTGTTATTCTTAGAGACAAT
GTAGATGTACTGATCAAGGTGAAGAAGATAATAGGAGGCATGAGGTGGAACTTCAAATTG
ATGGATCATGAGGACGGTCCCCTTGTTCCCGAGAAAATACTGGTTGCTGTCAAACAATAT
TGGACTCTGGGTGATACCAACTCCACATCCTCGCAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400054477
PEP Infomation

pacid=37445321 transcript=PGSC0003DMT400080300 locus=PGSC0003DMG400031262 ID=PGSC0003DMT400080300.v4.03 annot-version=v4.03
Sequence

MAGKNSGDNRTRTSVSIFIIAGLCCFFYLLGAWQRSGFGKGDSIAVAVTKTAGENCDILP
NLNFETRHAGEAGGTDEPEEVEELKPCDPQYTDYTPCQDQKRAMTFPRENMNYRERHCPP
QEEKLHCLIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTVEKAIQNWVQYEGNVFRFPGG
GTQFPQGADKYIDQLASVVPIENGTVRTALDTGCGVASWGAYLWKRNVIAMSFAPRDSHE
AQVQFALERGVPAVIGVLGTIKMPYPSKAFDMAHCSRCLIPWGAADGILMMEVDRVLRPG
GYWVLSGPPINWKVNFKAWQRPKEDLEEEQRKIEEAAKLLCWEKISEKGETAIWQKRKDS
ASCRSAQENSAARVCKPSDPDSVWYNKMEMCITPNNGNGGDESLKPFPERLYAVPPRIAN
GLVSGVSVAKYQEDSKKWKKHVSAYKKINKLLDTGRYRNIMDMNAGLGGFAAALHNPKFW
VMNVMPTIAEKNTLGVIFERGLIGIYHDWCEAFSTYPRTYDLIHASGLFSLYKDKCEFED
ILLEMDRILRPEGAVILRDNVDVLIKVKKIIGGMRWNFKLMDHEDGPLVPEKILVAVKQY
WTLGDTNSTSSQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400080300
Transcript Infomation

pacid=37445321 locus=PGSC0003DMG400031262 ID=PGSC0003DMT400080300.v4.03 annot-version=v4.03
Sequence

ATGGCGGGCAAAAACTCAGGGGATAATAGGACTAGGACTTCTGTATCAATATTTATAATA
GCTGGTCTATGCTGCTTCTTCTATTTACTTGGAGCATGGCAAAGAAGTGGGTTTGGGAAA
GGAGATAGTATAGCAGTGGCTGTCACCAAGACTGCTGGCGAGAATTGCGATATCCTACCA
AATCTCAATTTTGAAACTCGTCATGCTGGCGAAGCAGGCGGTACTGATGAGCCGGAAGAA
GTCGAGGAACTCAAGCCATGTGATCCTCAGTACACTGATTATACACCATGTCAAGATCAA
AAGCGTGCTATGACTTTCCCAAGGGAAAATATGAACTACCGAGAAAGGCATTGTCCACCT
CAAGAAGAGAAGTTACATTGCCTTATTCCAGCACCTAAGGGATATGTTACCCCATTTCCG
TGGCCAAAAAGTCGGGATTATGTTCCCTATGCCAATGCTCCATATAAGAGCTTGACTGTT
GAGAAGGCCATTCAGAACTGGGTTCAATATGAGGGTAACGTGTTTAGATTCCCAGGAGGA
GGGACACAATTCCCTCAAGGAGCAGATAAGTATATTGATCAGCTTGCTTCAGTTGTCCCA
ATCGAAAATGGGACAGTTCGGACTGCTTTGGACACTGGTTGTGGGGTTGCAAGTTGGGGT
GCTTATCTTTGGAAAAGAAATGTCATAGCAATGTCATTTGCCCCAAGAGACTCACATGAA
GCTCAGGTTCAGTTTGCTCTGGAAAGGGGTGTGCCTGCTGTTATTGGTGTACTAGGAACA
ATCAAAATGCCATATCCATCTAAAGCCTTTGATATGGCCCATTGTTCTCGTTGTCTAATC
CCATGGGGAGCTGCTGATGGAATCCTCATGATGGAAGTTGACCGAGTTCTTAGACCTGGA
GGCTACTGGGTGCTTTCTGGACCTCCTATCAACTGGAAGGTCAATTTTAAGGCCTGGCAA
CGCCCCAAGGAGGATCTTGAGGAAGAACAAAGGAAGATTGAAGAGGCTGCTAAACTTCTT
TGCTGGGAGAAGATATCTGAAAAGGGAGAGACTGCCATTTGGCAGAAAAGAAAGGATAGT
GCCTCATGCCGTTCTGCACAAGAAAATTCTGCAGCCAGAGTTTGTAAACCTTCTGATCCA
GATAGTGTCTGGTACAACAAAATGGAAATGTGCATAACACCAAACAATGGTAATGGTGGA
GACGAGAGTCTAAAGCCATTCCCTGAGAGACTTTATGCTGTTCCTCCAAGAATTGCCAAT
GGATTAGTTTCTGGAGTGTCTGTTGCGAAATATCAAGAAGACAGCAAGAAATGGAAGAAA
CACGTAAGTGCTTATAAGAAGATCAACAAACTCCTGGACACTGGAAGGTACCGCAACATT
ATGGACATGAATGCTGGACTAGGAGGTTTTGCAGCAGCACTTCACAATCCCAAGTTTTGG
GTTATGAATGTTATGCCAACAATAGCTGAGAAGAATACTTTGGGGGTTATATTTGAACGG
GGACTGATTGGTATCTATCATGACTGGTGTGAAGCATTTTCTACATACCCGAGGACATAT
GATCTCATTCATGCTAGTGGCCTTTTCAGTTTATACAAGGACAAGTGTGAATTTGAAGAC
ATTCTCTTAGAGATGGACCGTATTTTGCGTCCAGAAGGAGCTGTTATTCTTAGAGACAAT
GTAGATGTACTGATCAAGGTGAAGAAGATAATAGGAGGCATGAGGTGGAACTTCAAATTG
ATGGATCATGAGGACGGTCCCCTTGTTCCCGAGAAAATACTGGTTGCTGTCAAACAATAT
TGGACTCTGGGTGATACCAACTCCACATCCTCGCAATGA