Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080261
CDS Infomation

pacid=37464600 polypeptide=PGSC0003DMP400054447 locus=PGSC0003DMG400031244 ID=PGSC0003DMT400080261.v4.03 annot-version=v4.03
Sequence

ATGGCTACAGACAACAAATCAAAGCAAAAAACGAAGAGTAACAACAAGAATAGGCAACGA
TATCGTCCAAACAATAAATCAGTGAAGAAAGGTGGATACCCTTTACGTCCAGGAGTTCAA
GGGTTTTATATAACATGTGATGGTGGAAGGGAACGACAAGCCTCTCAAGAAGCTGTTAAT
GTTATCGACTCTTTTTATGAAGAGCTGGTGCAGGGAACAAATTCAAACTTAGGACAGGTA
GAATTATCAGAAAAACCTGTAAACAAAAAGACTGTTTTCAAGTATTCTGATTCTTCTAGT
AGTGATGATGAAGATGGAGAAAATGGGAATGACGAGGACCAGACCAAGGAGGAGACTTCA
AAAATTGAGCAACATCAAGAGAAAATTGATGATGAGATTGACAGCTTAAAAACTGGTGAA
TCCGGGTCTGAAAACAAGGATAACACCTCTACTGATGAACTAATACAAGAAAATACTGAG
AATAAGGAGGAGCTACAGAATACTCTTGAACAGAAAGATATTGAAGTTGGGGAGCCACCT
GCAAAGAAACAATGTGTGGAAAAAGAAGCAGCAGAAGCTGGACATATTGCATTTGGTAAG
ACAGAGGAGAAATCTATTGATAGACTAATTGATGCTGAGCTTGCTGAGTTGGGAGACAAA
AGCAAGAGGCGTTTTAGCTACCTAGACTCAGGTTGCAATGGTGTTGTGTTTGTTCACATG
AGCAAGAAAGATGGAGATCCCAACCCTAAGGAAATCGTTCAACATATGCTGTCCTCACTT
GCCTTGACAAAGAAACATGTATCAAGGTTCATATTGCGAGTGTTACCAGTTGAAGTAACA
TGTTATGCATCAGAGGAGGAAATTGGAAAAGCAATAATGCCTCTCATTACAAAATACCTA
CCTGCTGAAAGCGACACTCCAAAGAGGTTTGCAGTGCTTTATGAATCCCGAGCAAATACT
GGAATCAATAAGATGAAAATCATTGATGCTGTGGCTAAATATGTTCCTTCACCTCACAAA
GTTGATCTTAGCAACCCTGAAATAAACATAGTGGTTCAAATAGTCAAGACTGTCTGCTTG
CTTGGAGTTGTTGAAAAGTACAAGGAGTTGTCCAAGTATAACTTGAGGCAGCTTACCTCT
AAAAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400054447
PEP Infomation

pacid=37464600 transcript=PGSC0003DMT400080261 locus=PGSC0003DMG400031244 ID=PGSC0003DMT400080261.v4.03 annot-version=v4.03
Sequence

MATDNKSKQKTKSNNKNRQRYRPNNKSVKKGGYPLRPGVQGFYITCDGGRERQASQEAVN
VIDSFYEELVQGTNSNLGQVELSEKPVNKKTVFKYSDSSSSDDEDGENGNDEDQTKEETS
KIEQHQEKIDDEIDSLKTGESGSENKDNTSTDELIQENTENKEELQNTLEQKDIEVGEPP
AKKQCVEKEAAEAGHIAFGKTEEKSIDRLIDAELAELGDKSKRRFSYLDSGCNGVVFVHM
SKKDGDPNPKEIVQHMLSSLALTKKHVSRFILRVLPVEVTCYASEEEIGKAIMPLITKYL
PAESDTPKRFAVLYESRANTGINKMKIIDAVAKYVPSPHKVDLSNPEINIVVQIVKTVCL
LGVVEKYKELSKYNLRQLTSKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400080261
Transcript Infomation

pacid=37464600 locus=PGSC0003DMG400031244 ID=PGSC0003DMT400080261.v4.03 annot-version=v4.03
Sequence

ATGGCTACAGACAACAAATCAAAGCAAAAAACGAAGAGTAACAACAAGAATAGGCAACGA
TATCGTCCAAACAATAAATCAGTGAAGAAAGGTGGATACCCTTTACGTCCAGGAGTTCAA
GGGTTTTATATAACATGTGATGGTGGAAGGGAACGACAAGCCTCTCAAGAAGCTGTTAAT
GTTATCGACTCTTTTTATGAAGAGCTGGTGCAGGGAACAAATTCAAACTTAGGACAGGTA
GAATTATCAGAAAAACCTGTAAACAAAAAGACTGTTTTCAAGTATTCTGATTCTTCTAGT
AGTGATGATGAAGATGGAGAAAATGGGAATGACGAGGACCAGACCAAGGAGGAGACTTCA
AAAATTGAGCAACATCAAGAGAAAATTGATGATGAGATTGACAGCTTAAAAACTGGTGAA
TCCGGGTCTGAAAACAAGGATAACACCTCTACTGATGAACTAATACAAGAAAATACTGAG
AATAAGGAGGAGCTACAGAATACTCTTGAACAGAAAGATATTGAAGTTGGGGAGCCACCT
GCAAAGAAACAATGTGTGGAAAAAGAAGCAGCAGAAGCTGGACATATTGCATTTGGTAAG
ACAGAGGAGAAATCTATTGATAGACTAATTGATGCTGAGCTTGCTGAGTTGGGAGACAAA
AGCAAGAGGCGTTTTAGCTACCTAGACTCAGGTTGCAATGGTGTTGTGTTTGTTCACATG
AGCAAGAAAGATGGAGATCCCAACCCTAAGGAAATCGTTCAACATATGCTGTCCTCACTT
GCCTTGACAAAGAAACATGTATCAAGGTTCATATTGCGAGTGTTACCAGTTGAAGTAACA
TGTTATGCATCAGAGGAGGAAATTGGAAAAGCAATAATGCCTCTCATTACAAAATACCTA
CCTGCTGAAAGCGACACTCCAAAGAGGTTTGCAGTGCTTTATGAATCCCGAGCAAATACT
GGAATCAATAAGATGAAAATCATTGATGCTGTGGCTAAATATGTTCCTTCACCTCACAAA
GTTGATCTTAGCAACCCTGAAATAAACATAGTGGTTCAAATAGTCAAGACTGTCTGCTTG
CTTGGAGTTGTTGAAAAGTACAAGGAGTTGTCCAAGTATAACTTGAGGCAGCTTACCTCT
AAAAACTAA