Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080243
CDS Infomation

pacid=37480002 polypeptide=PGSC0003DMP400054432 locus=PGSC0003DMG400031235 ID=PGSC0003DMT400080243.v4.03 annot-version=v4.03
Sequence

ATGGGATGTTTCACGGTTTCAAAGAGTAAGAAGAAAAAATCCGAGCATAGCATCCACATC
AAACGTGTGAACCCTCAGGAGCAGTCACCTACTGCACTGCCTGAACCCCAGAGACAAACA
AGATCATTGCAGTCAGCACCACCAAGTTTTAGAACAAGAGTGAAACCTGTGCAGTCAAAC
AATGGAGTAACAACGAGTAGGGCACGAACTCTATCCGCCCCATCAAGTCTAGACACAGCA
GATCAAGATGCTCTAGCATCGAATGAATGTGAGGAACATGAAGAGCTGACTAGTCGTGCT
GGATCAATAAAGGAATACAGGTCATCAGTTCCTCAGCCTCTACCACTTCCATCACCTCAG
AATGCCGCTGCTCTCAGGACTACGAAAAGCTTCAAAGTGGGGAATACAAGTAGCCCTCTC
AATGCCTCTGGACCATTGCCACTGCCTCCTGTGCTGCCTCCTACGTTGCCTTCTACCGGA
ATGCTTCGGAACTTTGCTTTTGATGAAATTTCTGCTGCATGCCACCATTTCTCTCCAGAA
CGTTGTGTGTCAGAAGGTCTTTCTTCTGTCATCTACAGAGCTTCTTTTGGGGATGATGCC
TCTGGTGCAAAGAAGCTTGAAGCCACTATAACTCGCCTTCACCCTTCTTCACAGGGTCTG
AAGGAATTTGTCAACGAGGTGAACACCCTGGCTTCTTTGCAACATTCTTCACTTTGTAAA
CTGATTGGTTTTCATGCACGCGAAGGTTCTGAGCACAGGATGTTGGTTTTTGAGAGGCTT
TTCCATGGAAGCTTAGACCGACTTTTGTTCGGAAGAGCAGATGGCCCCTCTATAGATTGG
AATGCGAGAACCAAAATTGCCTTATGTGCTGCACAAGGTCTTACATTTCTACATGAGGAG
GGACCTTTTCAGGCAATGTTCCAAGATTTTTCAACCGGAAATATACAAATCGACAAGGAT
TTTAGTGCTAAGCTCTCGGGGTATGGATGCATTACGAATATACAAGAGACAGAGATATCT
TGCAATTCAATCGCCCTGGCAAATCTCTCACAGGAGACACTGGAGAGAGGGTTGATAACT
CCTAAGAGCAATGTTTGGAGTTTTGGGATTGTTCTTCTAGAACTGCTCACTGGCCGGAAG
AATCTCGATGGCCGGTATTCAAAGGAAGAGAGGAATTTAGTCAAGTGGACTAGGCCTTTC
CTTGCTGATGATGGTAGATTATCGCTTATCATGGATCCTCAGCTTAAAGGACGGTTTCCC
GCAAAAGCAGCCAGGACAGTGGCTGATATTGCCCAAAGATGCTTGCAAAAGGATCCATCT
GAAAGGCCCACCATGAGAACTATCCTGGACCAACTCAAAACCGTACAAGTGATGAAGTGC
CCTTCACGGTTTCCTCTGCAAGAACCAGCGGTAGTTGGTGGTAAACACATGTCAAAGTCT
CCAAGCATGAATGGAATCATCACTCCTGTGCCAAGGTTGAGTTTCTCCCCTTCCTTACCA
CTCACCCGAACATCGGCTTCTCCCTCAAAGGTTGCTACTCAACCCTCGGCTCGTCCTTCA
TTAACATGTTCCTACTCTTTCTCTTTGGAGGACCTTGATAGACTGGAAAGCCGAAGGTCA
TCAACTTCATCTTTTCGCAGGTCTAGTGTTGAAGGATTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400054432
PEP Infomation

pacid=37480002 transcript=PGSC0003DMT400080243 locus=PGSC0003DMG400031235 ID=PGSC0003DMT400080243.v4.03 annot-version=v4.03
Sequence

MGCFTVSKSKKKKSEHSIHIKRVNPQEQSPTALPEPQRQTRSLQSAPPSFRTRVKPVQSN
NGVTTSRARTLSAPSSLDTADQDALASNECEEHEELTSRAGSIKEYRSSVPQPLPLPSPQ
NAAALRTTKSFKVGNTSSPLNASGPLPLPPVLPPTLPSTGMLRNFAFDEISAACHHFSPE
RCVSEGLSSVIYRASFGDDASGAKKLEATITRLHPSSQGLKEFVNEVNTLASLQHSSLCK
LIGFHAREGSEHRMLVFERLFHGSLDRLLFGRADGPSIDWNARTKIALCAAQGLTFLHEE
GPFQAMFQDFSTGNIQIDKDFSAKLSGYGCITNIQETEISCNSIALANLSQETLERGLIT
PKSNVWSFGIVLLELLTGRKNLDGRYSKEERNLVKWTRPFLADDGRLSLIMDPQLKGRFP
AKAARTVADIAQRCLQKDPSERPTMRTILDQLKTVQVMKCPSRFPLQEPAVVGGKHMSKS
PSMNGIITPVPRLSFSPSLPLTRTSASPSKVATQPSARPSLTCSYSFSLEDLDRLESRRS
STSSFRRSSVEGF*

Transcript Sequence

Transcript ID

PGSC0003DMT400080243
Transcript Infomation

pacid=37480002 locus=PGSC0003DMG400031235 ID=PGSC0003DMT400080243.v4.03 annot-version=v4.03
Sequence

ATGGGATGTTTCACGGTTTCAAAGAGTAAGAAGAAAAAATCCGAGCATAGCATCCACATC
AAACGTGTGAACCCTCAGGAGCAGTCACCTACTGCACTGCCTGAACCCCAGAGACAAACA
AGATCATTGCAGTCAGCACCACCAAGTTTTAGAACAAGAGTGAAACCTGTGCAGTCAAAC
AATGGAGTAACAACGAGTAGGGCACGAACTCTATCCGCCCCATCAAGTCTAGACACAGCA
GATCAAGATGCTCTAGCATCGAATGAATGTGAGGAACATGAAGAGCTGACTAGTCGTGCT
GGATCAATAAAGGAATACAGGTCATCAGTTCCTCAGCCTCTACCACTTCCATCACCTCAG
AATGCCGCTGCTCTCAGGACTACGAAAAGCTTCAAAGTGGGGAATACAAGTAGCCCTCTC
AATGCCTCTGGACCATTGCCACTGCCTCCTGTGCTGCCTCCTACGTTGCCTTCTACCGGA
ATGCTTCGGAACTTTGCTTTTGATGAAATTTCTGCTGCATGCCACCATTTCTCTCCAGAA
CGTTGTGTGTCAGAAGGTCTTTCTTCTGTCATCTACAGAGCTTCTTTTGGGGATGATGCC
TCTGGTGCAAAGAAGCTTGAAGCCACTATAACTCGCCTTCACCCTTCTTCACAGGGTCTG
AAGGAATTTGTCAACGAGGTGAACACCCTGGCTTCTTTGCAACATTCTTCACTTTGTAAA
CTGATTGGTTTTCATGCACGCGAAGGTTCTGAGCACAGGATGTTGGTTTTTGAGAGGCTT
TTCCATGGAAGCTTAGACCGACTTTTGTTCGGAAGAGCAGATGGCCCCTCTATAGATTGG
AATGCGAGAACCAAAATTGCCTTATGTGCTGCACAAGGTCTTACATTTCTACATGAGGAG
GGACCTTTTCAGGCAATGTTCCAAGATTTTTCAACCGGAAATATACAAATCGACAAGGAT
TTTAGTGCTAAGCTCTCGGGGTATGGATGCATTACGAATATACAAGAGACAGAGATATCT
TGCAATTCAATCGCCCTGGCAAATCTCTCACAGGAGACACTGGAGAGAGGGTTGATAACT
CCTAAGAGCAATGTTTGGAGTTTTGGGATTGTTCTTCTAGAACTGCTCACTGGCCGGAAG
AATCTCGATGGCCGGTATTCAAAGGAAGAGAGGAATTTAGTCAAGTGGACTAGGCCTTTC
CTTGCTGATGATGGTAGATTATCGCTTATCATGGATCCTCAGCTTAAAGGACGGTTTCCC
GCAAAAGCAGCCAGGACAGTGGCTGATATTGCCCAAAGATGCTTGCAAAAGGATCCATCT
GAAAGGCCCACCATGAGAACTATCCTGGACCAACTCAAAACCGTACAAGTGATGAAGTGC
CCTTCACGGTTTCCTCTGCAAGAACCAGCGGTAGTTGGTGGTAAACACATGTCAAAGTCT
CCAAGCATGAATGGAATCATCACTCCTGTGCCAAGGTTGAGTTTCTCCCCTTCCTTACCA
CTCACCCGAACATCGGCTTCTCCCTCAAAGGTTGCTACTCAACCCTCGGCTCGTCCTTCA
TTAACATGTTCCTACTCTTTCTCTTTGGAGGACCTTGATAGACTGGAAAGCCGAAGGTCA
TCAACTTCATCTTTTCGCAGGTCTAGTGTTGAAGGATTTTGA