Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080229
CDS Infomation

pacid=37478099 polypeptide=PGSC0003DMP400054421 locus=PGSC0003DMG400031228 ID=PGSC0003DMT400080229.v4.03 annot-version=v4.03
Sequence

ATGCTTAATGGTTCTATCCCTTCGAACTTTTCTGTCCTTCCAAATCTGCAGAGGCTGTCA
CTCAACAATAATAGGTTAAGTGGTTTTGTGCCAACTACCATTTGGGAGAATAAGACATTT
TCCCCAGGCGCAAAACTTAGATTGAACTTTCAACGTAATTTTCTCTCAGATATTTCGGGT
ATTCTTGATCCTCCTCCAAATGTCGATATTATGCTTTATGGAAATCCTGTTTGTGGAAAT
GCAAATGAGCGCCAGATTACCCAATTTTGTAAATCAAGAGACGGAGGTGAAGAGTATGGA
GGCTTGAACAACTCTATTCCAAGTTGTGCAGCCCAGCTGCCTTGCGATGTGGATTTTGAA
CATGTCCCAGCATTAATGGATGGCTGCTTTTGTGCAGCACCTTTTGGAGTTGGTTTGCGT
TTAAGAAGCCCTAGCATTTCAGACTTTCCACCACATTATAGTGACTTTGAACAGTGGATA
ACAAAAAGCGTTAATTTGAATGATTATCAACTGCAAATTGATTCGGTTTCATGGCAAAGC
GGTCCTAGGCTTAGGTTCTTTTTGAAATTCTTCCCTCCACGTGCAAATGACTCTGGAACC
AATGATTTTGGCAAATTTAATGACAGCGAGATAGTACGGATCGCAAACAAGTTTGCCTTT
TTTAATCTTACTGGAAGTGATATCTTTGGCCCATATGACCTGCTCAATTTCACTGCCATG
GCATATAATTCTGTCCTTTTTCCTCCGTTGGGAGGAGAGAGAAGCAGAAAAAACAGAGGC
ACTGTGGTTGGAATTGTCTTAGGGTCCATATTTGCTGCAGCTGTGCTACTTATGGCCTTA
ATATTCGTGTTGTTTAAAATGCGGCGGAGGTTACACGTTTCAAAAGATCAACCATTACCA
AAATTTCCAATGCGAATAGAAGGTGTTAAGGCAATGGGTTTTAAGGAATTAGAGGCAGCA
ACTAACAATTTTAGCAGTACTACTGAAATTGGCCAAGGAGGCTATGGAAAGGTCTACAAA
GGCACTTTGGCAGAGGGAACAATAGTGGCAATTAAACGTGCACAGCAAGGCTCATTGCAG
GGTGAAAGAGAGTTCTATACTGAGATAGAATTACTTTCACGTGTGCATCATCGAAATCTG
GTTTCCTTGGTGGGATACTGTAATGAAGGAAGTGAACAAATGTTGGTGTATGAGTTCATG
CCAAATGGTTCCTTGCATGATCTTCTAAAAGCTAGATATGGGGAATGTCTGAGTCTTGGA
ACAAGGTTATACATTGCTTTAGGTGCTGCCAGGGGCATCCTCTACCTCCATACTGAAGCT
AATCCTCCAATAATCCATCGTGATGTCAAAGCAAATAACATACTGTTGGACTCTAAGTTC
ACCGCAAAAGTTTCTGATTTTGGAATCTCAAAGCTTGCACCATTACCTGATGCTGAAACG
AGTGGGCATGTATCAACTGTTGTGAAAGGAACTCCTGTAAGGCTTTACTCGTCTTATATG
TTGAAGCCTGCAATAGAAAAGCTAGAAAATCGCAATGAGATAAGATCTGCAACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400054421
PEP Infomation

pacid=37478099 transcript=PGSC0003DMT400080229 locus=PGSC0003DMG400031228 ID=PGSC0003DMT400080229.v4.03 annot-version=v4.03
Sequence

MLNGSIPSNFSVLPNLQRLSLNNNRLSGFVPTTIWENKTFSPGAKLRLNFQRNFLSDISG
ILDPPPNVDIMLYGNPVCGNANERQITQFCKSRDGGEEYGGLNNSIPSCAAQLPCDVDFE
HVPALMDGCFCAAPFGVGLRLRSPSISDFPPHYSDFEQWITKSVNLNDYQLQIDSVSWQS
GPRLRFFLKFFPPRANDSGTNDFGKFNDSEIVRIANKFAFFNLTGSDIFGPYDLLNFTAM
AYNSVLFPPLGGERSRKNRGTVVGIVLGSIFAAAVLLMALIFVLFKMRRRLHVSKDQPLP
KFPMRIEGVKAMGFKELEAATNNFSSTTEIGQGGYGKVYKGTLAEGTIVAIKRAQQGSLQ
GEREFYTEIELLSRVHHRNLVSLVGYCNEGSEQMLVYEFMPNGSLHDLLKARYGECLSLG
TRLYIALGAARGILYLHTEANPPIIHRDVKANNILLDSKFTAKVSDFGISKLAPLPDAET
SGHVSTVVKGTPVRLYSSYMLKPAIEKLENRNEIRSAT*

Transcript Sequence

Transcript ID

PGSC0003DMT400080229
Transcript Infomation

pacid=37478099 locus=PGSC0003DMG400031228 ID=PGSC0003DMT400080229.v4.03 annot-version=v4.03
Sequence

ATGCTTAATGGTTCTATCCCTTCGAACTTTTCTGTCCTTCCAAATCTGCAGAGGCTGTCA
CTCAACAATAATAGGTTAAGTGGTTTTGTGCCAACTACCATTTGGGAGAATAAGACATTT
TCCCCAGGCGCAAAACTTAGATTGAACTTTCAACGTAATTTTCTCTCAGATATTTCGGGT
ATTCTTGATCCTCCTCCAAATGTCGATATTATGCTTTATGGAAATCCTGTTTGTGGAAAT
GCAAATGAGCGCCAGATTACCCAATTTTGTAAATCAAGAGACGGAGGTGAAGAGTATGGA
GGCTTGAACAACTCTATTCCAAGTTGTGCAGCCCAGCTGCCTTGCGATGTGGATTTTGAA
CATGTCCCAGCATTAATGGATGGCTGCTTTTGTGCAGCACCTTTTGGAGTTGGTTTGCGT
TTAAGAAGCCCTAGCATTTCAGACTTTCCACCACATTATAGTGACTTTGAACAGTGGATA
ACAAAAAGCGTTAATTTGAATGATTATCAACTGCAAATTGATTCGGTTTCATGGCAAAGC
GGTCCTAGGCTTAGGTTCTTTTTGAAATTCTTCCCTCCACGTGCAAATGACTCTGGAACC
AATGATTTTGGCAAATTTAATGACAGCGAGATAGTACGGATCGCAAACAAGTTTGCCTTT
TTTAATCTTACTGGAAGTGATATCTTTGGCCCATATGACCTGCTCAATTTCACTGCCATG
GCATATAATTCTGTCCTTTTTCCTCCGTTGGGAGGAGAGAGAAGCAGAAAAAACAGAGGC
ACTGTGGTTGGAATTGTCTTAGGGTCCATATTTGCTGCAGCTGTGCTACTTATGGCCTTA
ATATTCGTGTTGTTTAAAATGCGGCGGAGGTTACACGTTTCAAAAGATCAACCATTACCA
AAATTTCCAATGCGAATAGAAGGTGTTAAGGCAATGGGTTTTAAGGAATTAGAGGCAGCA
ACTAACAATTTTAGCAGTACTACTGAAATTGGCCAAGGAGGCTATGGAAAGGTCTACAAA
GGCACTTTGGCAGAGGGAACAATAGTGGCAATTAAACGTGCACAGCAAGGCTCATTGCAG
GGTGAAAGAGAGTTCTATACTGAGATAGAATTACTTTCACGTGTGCATCATCGAAATCTG
GTTTCCTTGGTGGGATACTGTAATGAAGGAAGTGAACAAATGTTGGTGTATGAGTTCATG
CCAAATGGTTCCTTGCATGATCTTCTAAAAGCTAGATATGGGGAATGTCTGAGTCTTGGA
ACAAGGTTATACATTGCTTTAGGTGCTGCCAGGGGCATCCTCTACCTCCATACTGAAGCT
AATCCTCCAATAATCCATCGTGATGTCAAAGCAAATAACATACTGTTGGACTCTAAGTTC
ACCGCAAAAGTTTCTGATTTTGGAATCTCAAAGCTTGCACCATTACCTGATGCTGAAACG
AGTGGGCATGTATCAACTGTTGTGAAAGGAACTCCTGTAAGGCTTTACTCGTCTTATATG
TTGAAGCCTGCAATAGAAAAGCTAGAAAATCGCAATGAGATAAGATCTGCAACTTGA