Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080213
CDS Infomation

pacid=37478582 polypeptide=PGSC0003DMP400054414 locus=PGSC0003DMG400031224 ID=PGSC0003DMT400080213.v4.03 annot-version=v4.03
Sequence

ATGAAGGAAAAGCTAGGGTTTTTAGTGTGTGTTTGGTTTATTGTAATCGGGTCTTGTTTG
GGTAGATTTGTGGTGGAAAAGAATAGCTTGAGAGTAACTTCTCCAGACTCAATCAAAGAT
GTGTATGAGTGTGCGATTGGGAATTTTGGGGTTCCACAATATGGAGGAACTATGGTTGGT
ATAGTTGTGTACCCTAAAGCTAATCAGAAGTCCTGCAAGGATTTTGCAGATTCTGATATT
TCATTCAAAACTAAGGCTGGTGGTATGCCTGTTTTCGTCCTTGTCGATAGAGGAGACTGC
TATTTCACACTTAAGGCTTGGAATGCTCAAAAGGCTGGAGCTGCTGCTATTCTTGTTGCT
GATGATCGCAATGAACCTTTGATTACCATGGACACCCCTGAGGAAGAGGATGCAAAGGCA
GATTATCTGCAAAATATAACTATTCCATCAGCTCTAATTAGTCAATCTCTTGGGGATAGC
ATCAAGAAGCAACTATCTAAAGGGGAGATGGTTAACATAAACCTGGATTGGAGAGAGGCT
CTTCCGCATCCTGATGAAAGAGTTGAGTACGAGTTTTGGACCAACAGTAATGATGAGTGT
GGTCCTAAGTGTGAAAGCCAGAGAGAGTTTGTCAAAAACTTCAAAGGGGCTGCCCAGATA
CTTGAGCAGAAGGGATATACACAATTCAGTCCCCATTACATAACTTGGTATTGTCCTGAG
GCATTTATTTTGAGCAAGCAATGCAAGTCTCAGTGCATCAACCATGGGAGATACTGTGCT
CCAGATCCTGAGCAAGACTTCAGCAAAGGTTATGATGGGAAGGATGTTGTTTTACAAAAT
CTGCGCCAAGCTTGCTTTCATAAGGTTGCCAATGAAAGCGGGAAGCCGTGGTTGTGGTGG
GACTACGTTACTGACTTTGGAATCCGGTGTCCAATGAAGGAGAAGAAGTACAATAAGGAG
TGTGCAGATCAAGTAATCAAATCCCTTGGCTTTGATGTAAAACAGATAGATAAATGTGTT
GGAGATCCTGAAGCGGATGCTGATAACCCTGTTCTAAAGGCTGAACAAGAAGCGCAGATT
GGAAAGAACTCTCGTGGAGATGTGACTATCTTGCCAACTCTTGTGATAAACAATAGGCAG
TACAGAGGCAAGTTGGACAAGGGAGCTGTTCTGAAGGCCATTTGTTCAGGTTTTGAGGAG
ACAACTGAGCCTGCAATTTGCTTAACCGATGATATACAAACAAATGAGTGCTTAGAGTCC
AATGGTGGGTGCTGGCAGGACAAAGCTGCTAACATTACTGCATGCCGGGATACTTTCCGT
GGGAAAGTCTGTGAATGCCCGACGGTTCAGGGAGTAAAATTTGTTGGCGATGGTTATTCT
CACTGTGAAGCATCGGGAGCATTACGCTGTGGATTAAACAATGGAGGTTGTTGGAAGGGA
ACCAAGGATGGAAGGACATTTTCTGCCTGCATAGATGACCACACAAAGGGTTGTAAATGT
CCACCAGGGTTCAAAGGAGATGGAGTGAATGTTTGTGACGATATTGATGAATGCAAAGAA
AGGCTGGCATGCCAGTGTCCAGATTGCAAATGCAAGAATACCTGGGGTGGTTATCAATGC
AGTTGCAGTGGCAATTTATTGTACATGCAAGAACATGACACATGTATAGGCAATGATGGA
AAAGCAGCATTTAGCTGGGGTCTTGTTTGGGTTATCATCTTGGGTTTGGCAGTTGCAGGA
GTTGGAGCATATGCCGTGTACAAGTATAGGATCCGGAGATACATGGATTCAGAGATCCGT
GCCATCATGGCACAGTACATGCCTTTGGATAATCAGGGAGAGGTGCCTAATCACATATCC
CACGGAAATGTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400054414
PEP Infomation

pacid=37478582 transcript=PGSC0003DMT400080213 locus=PGSC0003DMG400031224 ID=PGSC0003DMT400080213.v4.03 annot-version=v4.03
Sequence

MKEKLGFLVCVWFIVIGSCLGRFVVEKNSLRVTSPDSIKDVYECAIGNFGVPQYGGTMVG
IVVYPKANQKSCKDFADSDISFKTKAGGMPVFVLVDRGDCYFTLKAWNAQKAGAAAILVA
DDRNEPLITMDTPEEEDAKADYLQNITIPSALISQSLGDSIKKQLSKGEMVNINLDWREA
LPHPDERVEYEFWTNSNDECGPKCESQREFVKNFKGAAQILEQKGYTQFSPHYITWYCPE
AFILSKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVLQNLRQACFHKVANESGKPWLWW
DYVTDFGIRCPMKEKKYNKECADQVIKSLGFDVKQIDKCVGDPEADADNPVLKAEQEAQI
GKNSRGDVTILPTLVINNRQYRGKLDKGAVLKAICSGFEETTEPAICLTDDIQTNECLES
NGGCWQDKAANITACRDTFRGKVCECPTVQGVKFVGDGYSHCEASGALRCGLNNGGCWKG
TKDGRTFSACIDDHTKGCKCPPGFKGDGVNVCDDIDECKERLACQCPDCKCKNTWGGYQC
SCSGNLLYMQEHDTCIGNDGKAAFSWGLVWVIILGLAVAGVGAYAVYKYRIRRYMDSEIR
AIMAQYMPLDNQGEVPNHISHGNV*

Transcript Sequence

Transcript ID

PGSC0003DMT400080213
Transcript Infomation

pacid=37478582 locus=PGSC0003DMG400031224 ID=PGSC0003DMT400080213.v4.03 annot-version=v4.03
Sequence

ATGAAGGAAAAGCTAGGGTTTTTAGTGTGTGTTTGGTTTATTGTAATCGGGTCTTGTTTG
GGTAGATTTGTGGTGGAAAAGAATAGCTTGAGAGTAACTTCTCCAGACTCAATCAAAGAT
GTGTATGAGTGTGCGATTGGGAATTTTGGGGTTCCACAATATGGAGGAACTATGGTTGGT
ATAGTTGTGTACCCTAAAGCTAATCAGAAGTCCTGCAAGGATTTTGCAGATTCTGATATT
TCATTCAAAACTAAGGCTGGTGGTATGCCTGTTTTCGTCCTTGTCGATAGAGGAGACTGC
TATTTCACACTTAAGGCTTGGAATGCTCAAAAGGCTGGAGCTGCTGCTATTCTTGTTGCT
GATGATCGCAATGAACCTTTGATTACCATGGACACCCCTGAGGAAGAGGATGCAAAGGCA
GATTATCTGCAAAATATAACTATTCCATCAGCTCTAATTAGTCAATCTCTTGGGGATAGC
ATCAAGAAGCAACTATCTAAAGGGGAGATGGTTAACATAAACCTGGATTGGAGAGAGGCT
CTTCCGCATCCTGATGAAAGAGTTGAGTACGAGTTTTGGACCAACAGTAATGATGAGTGT
GGTCCTAAGTGTGAAAGCCAGAGAGAGTTTGTCAAAAACTTCAAAGGGGCTGCCCAGATA
CTTGAGCAGAAGGGATATACACAATTCAGTCCCCATTACATAACTTGGTATTGTCCTGAG
GCATTTATTTTGAGCAAGCAATGCAAGTCTCAGTGCATCAACCATGGGAGATACTGTGCT
CCAGATCCTGAGCAAGACTTCAGCAAAGGTTATGATGGGAAGGATGTTGTTTTACAAAAT
CTGCGCCAAGCTTGCTTTCATAAGGTTGCCAATGAAAGCGGGAAGCCGTGGTTGTGGTGG
GACTACGTTACTGACTTTGGAATCCGGTGTCCAATGAAGGAGAAGAAGTACAATAAGGAG
TGTGCAGATCAAGTAATCAAATCCCTTGGCTTTGATGTAAAACAGATAGATAAATGTGTT
GGAGATCCTGAAGCGGATGCTGATAACCCTGTTCTAAAGGCTGAACAAGAAGCGCAGATT
GGAAAGAACTCTCGTGGAGATGTGACTATCTTGCCAACTCTTGTGATAAACAATAGGCAG
TACAGAGGCAAGTTGGACAAGGGAGCTGTTCTGAAGGCCATTTGTTCAGGTTTTGAGGAG
ACAACTGAGCCTGCAATTTGCTTAACCGATGATATACAAACAAATGAGTGCTTAGAGTCC
AATGGTGGGTGCTGGCAGGACAAAGCTGCTAACATTACTGCATGCCGGGATACTTTCCGT
GGGAAAGTCTGTGAATGCCCGACGGTTCAGGGAGTAAAATTTGTTGGCGATGGTTATTCT
CACTGTGAAGCATCGGGAGCATTACGCTGTGGATTAAACAATGGAGGTTGTTGGAAGGGA
ACCAAGGATGGAAGGACATTTTCTGCCTGCATAGATGACCACACAAAGGGTTGTAAATGT
CCACCAGGGTTCAAAGGAGATGGAGTGAATGTTTGTGACGATATTGATGAATGCAAAGAA
AGGCTGGCATGCCAGTGTCCAGATTGCAAATGCAAGAATACCTGGGGTGGTTATCAATGC
AGTTGCAGTGGCAATTTATTGTACATGCAAGAACATGACACATGTATAGGCAATGATGGA
AAAGCAGCATTTAGCTGGGGTCTTGTTTGGGTTATCATCTTGGGTTTGGCAGTTGCAGGA
GTTGGAGCATATGCCGTGTACAAGTATAGGATCCGGAGATACATGGATTCAGAGATCCGT
GCCATCATGGCACAGTACATGCCTTTGGATAATCAGGGAGAGGTGCCTAATCACATATCC
CACGGAAATGTCTGA