Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080212
CDS Infomation

pacid=37479269 polypeptide=PGSC0003DMP400054413 locus=PGSC0003DMG400031223 ID=PGSC0003DMT400080212.v4.03 annot-version=v4.03
Sequence

ATGAAACGCGTTACTTCCGACGTACTACTTCTAATTTTCTTTACTTTCAACTTTTTCAGA
AACGTGTCAGCTTCAATTCACGAGTACAAAGATGAGCAATTTATTCCAAAGTCCAATGCT
TTCTTCTTCCATGGAGGAACTGAGGGTCTCTATGCTTCGAAATCGTCATCAAATGTTTCC
CCAGATAAACCCCTTGAAGGAAAAACGTTTATCAGATTTGAAGATGTTGTCTTTTTGAGG
ACGAGGGAGTCTGCTAATGCGAAAAATGAAATGCAGAGTCGAACTGGGTTGATTGAAACT
ATCATTCTTGAGGTCAGAGACAGAGAAAGGATCGGAGATGCTTTTGCAAAGTCTAATGCT
CTGTGTTGTACTCCAAAACTTGCTCAAGAGAAGTTCTGCACGGTCGGAGAGGTTATAATT
CAGCACAACCAAGACAACCCACTTTGGCCACTACGTATTCAGACGTTTTTTGAAGGAAAG
AATCAGGAGGCAAATATGCTTCCCACAACAGTTGAAATAAACAGTACTGGCATGTATTAC
CTTTATTACATGTTTTGTGACCCAGAACTTAAGGGAACAATAATCAGAGGCAGAACAGTA
TGGAAAAATCCAGATGGCTATTTACCAGGGAGAATGGTACCATTGATGACCTTCTACGGA
CTTGCTTCTTTAGCCTATCTTGTACTTGGTCTATTTTGGTTTCTAAGGTTTGTCCAGTTC
TGGAAGGATGTCATACAGCTACATTACCAGATTACAGCTGTTATTGCCCTTGGCATGTCT
GAAATGGCTCTCTGGTATTATGAATATGCAAATCTGAATTCCACTGGAAGCAGACCTATG
GTAATTACGATATGGGCAGTTACAATGACTGCTGTAAAAAAGACGTTGTCCCGTGTGCTT
CTTTTAGTCGTTTCAATGGGTTATGGTGTCGTGCGGCCTACTCTTGGTGGTGTAACCTCA
AAAGTGTTCCTGTTAGCCCTTATGTATTTTATTGCTACGGAGGCACTTGAACTTGTGGAG
CATTTGGGCAGCATCAATGACTTCTCAAGGAAAACCAGGATATATTTGGTGCTGCCTGTT
GTTTTCTTGGATGCATCGTTTATTTTGTGGATATTCTCATCATTATCCAAGACACTGGAA
AAATTACAGATGCGGAAAAGCATGGCAAAACTTGATCTTTATAGAAAGTTTACCAATTCC
CTTGCAATTTTTGTGCTGCTTTCCATTGCTTGGGTTGGCTATGAGCTGTACTTCAATGCA
AGTGACCCATTAAGTGAGCTATGGCGAATTTCCTGGATTATTCCAGCTTTCTGGAGTTTG
CTTGCCTTTTCGTTGTTGGTAGTAGTATGTATTCTCTGGGCTCCTTCCAGTAACCCAACC
AGATATGCATATTCTGGTGAGACCGCGGATGATTATGATGAGGAAGCCATCTCTCTCACG
ACTGGAGTGAGGGTAAGTGACTCGGGGACCAAGCTCGAAAGGAAAGAAAAGAAAGCATCT
GTTTCAACCGATCTTGTAACTGATCAAAGAGAAGATCTTGAGGAGGACAAGCGTGAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400054413
PEP Infomation

pacid=37479269 transcript=PGSC0003DMT400080212 locus=PGSC0003DMG400031223 ID=PGSC0003DMT400080212.v4.03 annot-version=v4.03
Sequence

MKRVTSDVLLLIFFTFNFFRNVSASIHEYKDEQFIPKSNAFFFHGGTEGLYASKSSSNVS
PDKPLEGKTFIRFEDVVFLRTRESANAKNEMQSRTGLIETIILEVRDRERIGDAFAKSNA
LCCTPKLAQEKFCTVGEVIIQHNQDNPLWPLRIQTFFEGKNQEANMLPTTVEINSTGMYY
LYYMFCDPELKGTIIRGRTVWKNPDGYLPGRMVPLMTFYGLASLAYLVLGLFWFLRFVQF
WKDVIQLHYQITAVIALGMSEMALWYYEYANLNSTGSRPMVITIWAVTMTAVKKTLSRVL
LLVVSMGYGVVRPTLGGVTSKVFLLALMYFIATEALELVEHLGSINDFSRKTRIYLVLPV
VFLDASFILWIFSSLSKTLEKLQMRKSMAKLDLYRKFTNSLAIFVLLSIAWVGYELYFNA
SDPLSELWRISWIIPAFWSLLAFSLLVVVCILWAPSSNPTRYAYSGETADDYDEEAISLT
TGVRVSDSGTKLERKEKKASVSTDLVTDQREDLEEDKRE*

Transcript Sequence

Transcript ID

PGSC0003DMT400080212
Transcript Infomation

pacid=37479269 locus=PGSC0003DMG400031223 ID=PGSC0003DMT400080212.v4.03 annot-version=v4.03
Sequence

ATGAAACGCGTTACTTCCGACGTACTACTTCTAATTTTCTTTACTTTCAACTTTTTCAGA
AACGTGTCAGCTTCAATTCACGAGTACAAAGATGAGCAATTTATTCCAAAGTCCAATGCT
TTCTTCTTCCATGGAGGAACTGAGGGTCTCTATGCTTCGAAATCGTCATCAAATGTTTCC
CCAGATAAACCCCTTGAAGGAAAAACGTTTATCAGATTTGAAGATGTTGTCTTTTTGAGG
ACGAGGGAGTCTGCTAATGCGAAAAATGAAATGCAGAGTCGAACTGGGTTGATTGAAACT
ATCATTCTTGAGGTCAGAGACAGAGAAAGGATCGGAGATGCTTTTGCAAAGTCTAATGCT
CTGTGTTGTACTCCAAAACTTGCTCAAGAGAAGTTCTGCACGGTCGGAGAGGTTATAATT
CAGCACAACCAAGACAACCCACTTTGGCCACTACGTATTCAGACGTTTTTTGAAGGAAAG
AATCAGGAGGCAAATATGCTTCCCACAACAGTTGAAATAAACAGTACTGGCATGTATTAC
CTTTATTACATGTTTTGTGACCCAGAACTTAAGGGAACAATAATCAGAGGCAGAACAGTA
TGGAAAAATCCAGATGGCTATTTACCAGGGAGAATGGTACCATTGATGACCTTCTACGGA
CTTGCTTCTTTAGCCTATCTTGTACTTGGTCTATTTTGGTTTCTAAGGTTTGTCCAGTTC
TGGAAGGATGTCATACAGCTACATTACCAGATTACAGCTGTTATTGCCCTTGGCATGTCT
GAAATGGCTCTCTGGTATTATGAATATGCAAATCTGAATTCCACTGGAAGCAGACCTATG
GTAATTACGATATGGGCAGTTACAATGACTGCTGTAAAAAAGACGTTGTCCCGTGTGCTT
CTTTTAGTCGTTTCAATGGGTTATGGTGTCGTGCGGCCTACTCTTGGTGGTGTAACCTCA
AAAGTGTTCCTGTTAGCCCTTATGTATTTTATTGCTACGGAGGCACTTGAACTTGTGGAG
CATTTGGGCAGCATCAATGACTTCTCAAGGAAAACCAGGATATATTTGGTGCTGCCTGTT
GTTTTCTTGGATGCATCGTTTATTTTGTGGATATTCTCATCATTATCCAAGACACTGGAA
AAATTACAGATGCGGAAAAGCATGGCAAAACTTGATCTTTATAGAAAGTTTACCAATTCC
CTTGCAATTTTTGTGCTGCTTTCCATTGCTTGGGTTGGCTATGAGCTGTACTTCAATGCA
AGTGACCCATTAAGTGAGCTATGGCGAATTTCCTGGATTATTCCAGCTTTCTGGAGTTTG
CTTGCCTTTTCGTTGTTGGTAGTAGTATGTATTCTCTGGGCTCCTTCCAGTAACCCAACC
AGATATGCATATTCTGGTGAGACCGCGGATGATTATGATGAGGAAGCCATCTCTCTCACG
ACTGGAGTGAGGGTAAGTGACTCGGGGACCAAGCTCGAAAGGAAAGAAAAGAAAGCATCT
GTTTCAACCGATCTTGTAACTGATCAAAGAGAAGATCTTGAGGAGGACAAGCGTGAGTAG