Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080203
CDS Infomation

pacid=37478459 polypeptide=PGSC0003DMP400054405 locus=PGSC0003DMG400031221 ID=PGSC0003DMT400080203.v4.03 annot-version=v4.03
Sequence

ATGGTCAGCCATAAGCAGAGTTTTAGTTCTAAGTTCATTTTTCTGGCAGCTAGTTTTGTA
CTTGTTGTGTTCATAAAGAACGCAAATTCTGCTCCGTTTGATGAAGCTGGGAATGAGGGA
GAGATGGAAGATGGAGCAGCGTGGACGATGGTACAGAAGAGCGGGGACCAATTTCTGTTG
AATGGACAACCTTTCTATGTGAATGGATTCAACACTTACTGGTTGATGGTGTTTGCTGCT
GATCAGTCCACAAGGGGAAAAGTTACTGAGGTGTTCCAGCAGGCATCTGCTGTCGGTCTA
TCAGTATGCCGAACTTGGGCTTTTAATGATGGCCAATGGCGTGCTCTTCAGAAAACTCCT
GCTGTTTATGACGAAGACGTTTTCAAGGCTCTGGATTTTGTGGTGAGTGAAGCCAAGAAA
TTCAAGATTAGGCTGATACTGTCACTAGTCAACAACTGGGAAGCATACGGTGGAAAATCG
CAGTATGTAAAATGGGGTAAAGCTGCTGGCCTGAATTTGACTTCTGATGATGACTTCTTC
TCTCATCCCACACTCAAAAGCTACTACAAGGCTCATGTGAAGGCTGTGCTCAATAGAGTT
AATACCTTTACCAACATGACATACAAGGATGACCCTACTATTTTCGGTTGGGAACTGATG
AATGAGCCGCGGTGTGAATCAGATCCTTCTGGGGATAAACTGCATGCTTGGATAGAAGAA
ATGGCAGTTTATGTGAAGACAATAGATCCAAAGCATTTGGTGCAGATCGGACTGGAAGGT
TTCTATGGTCCCTCGACTCCTAATAAAGCTCAGATCAACCCAAACTCCTATGCTCAACAA
GTCGGAACTGACTTCATTAGAAACCATCAGGTTCTTGGAGTTGATTTCGCCTCAGCTCAC
ATATATCCCGACTCTTGGATTTCACAAGAGATTTCTGATGCTCATATTGGATTCACCAAG
ACATGGATGCAAGCACACATTGATGACGCGGAGAACTATCTCAACATGCCAGTGGTATTC
TCAGAGTTCGGTGTTTCTGCAAAAGACCCTGGCTACAATTCAACTTTCAGAGACTCACTA
ATCAGTACAGTTTACACAATACTATTGAATTCTACTAAGAAAGGAGGGGCTGGAGGTGGA
AGTCTTTTGTGGCAAGTGTTTCCAGAAGGAACAGATTACATGGATGATGGTTATGCAATA
GTACTTTCAAAGGCACTTTCAACCTCGAACATCGTATCTCTTCATTCTAAGAGGCTAAAT
ACCTACAATTCCCTCTGCTCTTGGAAATGCCACTGGGGTTGCAAGAAGAAACATGCCCTT
GACAACTTCCAGTTACATGAAGAGCTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400054405
PEP Infomation

pacid=37478459 transcript=PGSC0003DMT400080203 locus=PGSC0003DMG400031221 ID=PGSC0003DMT400080203.v4.03 annot-version=v4.03
Sequence

MVSHKQSFSSKFIFLAASFVLVVFIKNANSAPFDEAGNEGEMEDGAAWTMVQKSGDQFLL
NGQPFYVNGFNTYWLMVFAADQSTRGKVTEVFQQASAVGLSVCRTWAFNDGQWRALQKTP
AVYDEDVFKALDFVVSEAKKFKIRLILSLVNNWEAYGGKSQYVKWGKAAGLNLTSDDDFF
SHPTLKSYYKAHVKAVLNRVNTFTNMTYKDDPTIFGWELMNEPRCESDPSGDKLHAWIEE
MAVYVKTIDPKHLVQIGLEGFYGPSTPNKAQINPNSYAQQVGTDFIRNHQVLGVDFASAH
IYPDSWISQEISDAHIGFTKTWMQAHIDDAENYLNMPVVFSEFGVSAKDPGYNSTFRDSL
ISTVYTILLNSTKKGGAGGGSLLWQVFPEGTDYMDDGYAIVLSKALSTSNIVSLHSKRLN
TYNSLCSWKCHWGCKKKHALDNFQLHEEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400080203
Transcript Infomation

pacid=37478459 locus=PGSC0003DMG400031221 ID=PGSC0003DMT400080203.v4.03 annot-version=v4.03
Sequence

ATGGTCAGCCATAAGCAGAGTTTTAGTTCTAAGTTCATTTTTCTGGCAGCTAGTTTTGTA
CTTGTTGTGTTCATAAAGAACGCAAATTCTGCTCCGTTTGATGAAGCTGGGAATGAGGGA
GAGATGGAAGATGGAGCAGCGTGGACGATGGTACAGAAGAGCGGGGACCAATTTCTGTTG
AATGGACAACCTTTCTATGTGAATGGATTCAACACTTACTGGTTGATGGTGTTTGCTGCT
GATCAGTCCACAAGGGGAAAAGTTACTGAGGTGTTCCAGCAGGCATCTGCTGTCGGTCTA
TCAGTATGCCGAACTTGGGCTTTTAATGATGGCCAATGGCGTGCTCTTCAGAAAACTCCT
GCTGTTTATGACGAAGACGTTTTCAAGGCTCTGGATTTTGTGGTGAGTGAAGCCAAGAAA
TTCAAGATTAGGCTGATACTGTCACTAGTCAACAACTGGGAAGCATACGGTGGAAAATCG
CAGTATGTAAAATGGGGTAAAGCTGCTGGCCTGAATTTGACTTCTGATGATGACTTCTTC
TCTCATCCCACACTCAAAAGCTACTACAAGGCTCATGTGAAGGCTGTGCTCAATAGAGTT
AATACCTTTACCAACATGACATACAAGGATGACCCTACTATTTTCGGTTGGGAACTGATG
AATGAGCCGCGGTGTGAATCAGATCCTTCTGGGGATAAACTGCATGCTTGGATAGAAGAA
ATGGCAGTTTATGTGAAGACAATAGATCCAAAGCATTTGGTGCAGATCGGACTGGAAGGT
TTCTATGGTCCCTCGACTCCTAATAAAGCTCAGATCAACCCAAACTCCTATGCTCAACAA
GTCGGAACTGACTTCATTAGAAACCATCAGGTTCTTGGAGTTGATTTCGCCTCAGCTCAC
ATATATCCCGACTCTTGGATTTCACAAGAGATTTCTGATGCTCATATTGGATTCACCAAG
ACATGGATGCAAGCACACATTGATGACGCGGAGAACTATCTCAACATGCCAGTGGTATTC
TCAGAGTTCGGTGTTTCTGCAAAAGACCCTGGCTACAATTCAACTTTCAGAGACTCACTA
ATCAGTACAGTTTACACAATACTATTGAATTCTACTAAGAAAGGAGGGGCTGGAGGTGGA
AGTCTTTTGTGGCAAGTGTTTCCAGAAGGAACAGATTACATGGATGATGGTTATGCAATA
GTACTTTCAAAGGCACTTTCAACCTCGAACATCGTATCTCTTCATTCTAAGAGGCTAAAT
ACCTACAATTCCCTCTGCTCTTGGAAATGCCACTGGGGTTGCAAGAAGAAACATGCCCTT
GACAACTTCCAGTTACATGAAGAGCTTTAA