Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080118
CDS Infomation

pacid=37474049 polypeptide=PGSC0003DMP400054346 locus=PGSC0003DMG400031194 ID=PGSC0003DMT400080118.v4.03 annot-version=v4.03
Sequence

ATGAAGAAAATTTGTACTACACTTTGGTTACAATTTTTTGTTGTAATTATAGTTGCTAAG
AGAATACCAACAACATTGGATGGACCATTTAAGCCACTAACTCATAGATTTGATCCTTTA
TTGCATAAAGGAAGTGATGATTTGCCAATGGATCATCCAAGGCTTAAGAGGAATGTAATT
TCATTTTTTCCAGAACAAATTGCTCTTGCTTTGTCAACTACTTCATCTTTAATGTGGATT
TCTTGGATCACTGGTGAAGCTCAGATTGGTCTAAACGTGACTCCACACGATCCGAAAACA
GTGGCGAGTGAGGTATGGTATGGGAAGGAAAGTGGGAAGTACACAATGAAGCAAAATGGA
GTTTCAGTTGTTTACAGTCAATTGTATCCCTTTGAAGGGCTATGGAACTACACTTCTGGC
ATCATTCATCATGTGAAGATTGATGGTCTTGAACCTGAAACAAAGTATTACTACAAGTGT
GGTGATAGTTCTTTAGTAGCAATGAGTGATGAACTTGCATTTGAGACCTTTCCATTGCCT
GCACCTAACAAGTATCCACGACGAATAGCAGTTGTTGGTGACTTAGGTCTTACAAGCAAT
ACAACCACAACAATTGATCATCTCATAATGAATGATCCTTCCATGATATTGATGGTTGGA
GATTTAACTTACGCGAATCAATACCTTACCACTGGTGGTAAAGGAGCTTCATGCTATTCT
TGTCAGTTTCCAGATGCACCGATAAGAGAAACATTTCAACCTCGATGGGATGGATGGGGA
AGGTTTATGGAGCCGTTAATCTCAAGAGTTCCAATGATGGTTATCGAAGGAAACCATGAG
ATCGAACCTCAAGCAGCAGGGCTCATATTCCAATCGTATTTGACAAGATATTCTGTTCCT
TCAAAGGAATCTGGCTCTAATAGTAACCTTTACTACTCTTTTAATGCCGGAGGAATCCAT
TTCATCATGCTAGGAGCTTACGTTGACTATAATCAGACGAGTGCTCAGTATTCTTGGCTT
CAGCATGATCTGGAAAAAGTAGATCGTGGCGTGACTCCTTGGCTGGTGGCTGCATGGCAT
TCTCCTTGGTACAATAGCTATTCATCACACTACCAAGAATTTGAGTGCATGAGGCAGGAA
ATGGAAGAAATGCTATATACATATCGCGTTGATATAGTTTTCTCCGGTCATGTACATGCA
TATGAGCGAATGAATCGAGTCTACAACTATACTTTGGATCCATGTGGTCCTGTTTACATA
ACAGTCGGAGATGGTGGTAATATTGAGAAAGTTGACGCTGATCATGCAGATGATCCTGGG
AAATGTCCTTCACCAGGTGACAACATTCCAGAATTTGGAGGTGTATGTCACATGAACTTT
AGCAGTGGACCTGCCAAAGGAAAATTTTGCTGGGATAGACAACCAGAATGGAGTGCATAT
AGAGAGAGCAGCTTCGGGCACGGGATACTGGAGATGGTAAATTCAACTCATGCGTTGTGG
ACTTGGCACCGCAATCAGGATATTTATCGTGAAAACAGTCATGGTGATCAATTATACATA
GTACGACAACCTCATACTTGCTCTGTTGACTCAAAGGTACCCTTTCATCTACCTCAAAGA
CAGGATAGCAGGTTGAGTCCATCAATACCAGTGGCGTTGGAACATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400054346
PEP Infomation

pacid=37474049 transcript=PGSC0003DMT400080118 locus=PGSC0003DMG400031194 ID=PGSC0003DMT400080118.v4.03 annot-version=v4.03
Sequence

MKKICTTLWLQFFVVIIVAKRIPTTLDGPFKPLTHRFDPLLHKGSDDLPMDHPRLKRNVI
SFFPEQIALALSTTSSLMWISWITGEAQIGLNVTPHDPKTVASEVWYGKESGKYTMKQNG
VSVVYSQLYPFEGLWNYTSGIIHHVKIDGLEPETKYYYKCGDSSLVAMSDELAFETFPLP
APNKYPRRIAVVGDLGLTSNTTTTIDHLIMNDPSMILMVGDLTYANQYLTTGGKGASCYS
CQFPDAPIRETFQPRWDGWGRFMEPLISRVPMMVIEGNHEIEPQAAGLIFQSYLTRYSVP
SKESGSNSNLYYSFNAGGIHFIMLGAYVDYNQTSAQYSWLQHDLEKVDRGVTPWLVAAWH
SPWYNSYSSHYQEFECMRQEMEEMLYTYRVDIVFSGHVHAYERMNRVYNYTLDPCGPVYI
TVGDGGNIEKVDADHADDPGKCPSPGDNIPEFGGVCHMNFSSGPAKGKFCWDRQPEWSAY
RESSFGHGILEMVNSTHALWTWHRNQDIYRENSHGDQLYIVRQPHTCSVDSKVPFHLPQR
QDSRLSPSIPVALEH*

Transcript Sequence

Transcript ID

PGSC0003DMT400080118
Transcript Infomation

pacid=37474049 locus=PGSC0003DMG400031194 ID=PGSC0003DMT400080118.v4.03 annot-version=v4.03
Sequence

ATGAAGAAAATTTGTACTACACTTTGGTTACAATTTTTTGTTGTAATTATAGTTGCTAAG
AGAATACCAACAACATTGGATGGACCATTTAAGCCACTAACTCATAGATTTGATCCTTTA
TTGCATAAAGGAAGTGATGATTTGCCAATGGATCATCCAAGGCTTAAGAGGAATGTAATT
TCATTTTTTCCAGAACAAATTGCTCTTGCTTTGTCAACTACTTCATCTTTAATGTGGATT
TCTTGGATCACTGGTGAAGCTCAGATTGGTCTAAACGTGACTCCACACGATCCGAAAACA
GTGGCGAGTGAGGTATGGTATGGGAAGGAAAGTGGGAAGTACACAATGAAGCAAAATGGA
GTTTCAGTTGTTTACAGTCAATTGTATCCCTTTGAAGGGCTATGGAACTACACTTCTGGC
ATCATTCATCATGTGAAGATTGATGGTCTTGAACCTGAAACAAAGTATTACTACAAGTGT
GGTGATAGTTCTTTAGTAGCAATGAGTGATGAACTTGCATTTGAGACCTTTCCATTGCCT
GCACCTAACAAGTATCCACGACGAATAGCAGTTGTTGGTGACTTAGGTCTTACAAGCAAT
ACAACCACAACAATTGATCATCTCATAATGAATGATCCTTCCATGATATTGATGGTTGGA
GATTTAACTTACGCGAATCAATACCTTACCACTGGTGGTAAAGGAGCTTCATGCTATTCT
TGTCAGTTTCCAGATGCACCGATAAGAGAAACATTTCAACCTCGATGGGATGGATGGGGA
AGGTTTATGGAGCCGTTAATCTCAAGAGTTCCAATGATGGTTATCGAAGGAAACCATGAG
ATCGAACCTCAAGCAGCAGGGCTCATATTCCAATCGTATTTGACAAGATATTCTGTTCCT
TCAAAGGAATCTGGCTCTAATAGTAACCTTTACTACTCTTTTAATGCCGGAGGAATCCAT
TTCATCATGCTAGGAGCTTACGTTGACTATAATCAGACGAGTGCTCAGTATTCTTGGCTT
CAGCATGATCTGGAAAAAGTAGATCGTGGCGTGACTCCTTGGCTGGTGGCTGCATGGCAT
TCTCCTTGGTACAATAGCTATTCATCACACTACCAAGAATTTGAGTGCATGAGGCAGGAA
ATGGAAGAAATGCTATATACATATCGCGTTGATATAGTTTTCTCCGGTCATGTACATGCA
TATGAGCGAATGAATCGAGTCTACAACTATACTTTGGATCCATGTGGTCCTGTTTACATA
ACAGTCGGAGATGGTGGTAATATTGAGAAAGTTGACGCTGATCATGCAGATGATCCTGGG
AAATGTCCTTCACCAGGTGACAACATTCCAGAATTTGGAGGTGTATGTCACATGAACTTT
AGCAGTGGACCTGCCAAAGGAAAATTTTGCTGGGATAGACAACCAGAATGGAGTGCATAT
AGAGAGAGCAGCTTCGGGCACGGGATACTGGAGATGGTAAATTCAACTCATGCGTTGTGG
ACTTGGCACCGCAATCAGGATATTTATCGTGAAAACAGTCATGGTGATCAATTATACATA
GTACGACAACCTCATACTTGCTCTGTTGACTCAAAGGTACCCTTTCATCTACCTCAAAGA
CAGGATAGCAGGTTGAGTCCATCAATACCAGTGGCGTTGGAACATTGA