Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080101
CDS Infomation

pacid=37465561 polypeptide=PGSC0003DMP400054335 locus=PGSC0003DMG400031189 ID=PGSC0003DMT400080101.v4.03 annot-version=v4.03
Sequence

ATGGGGAATCGATTTATTTGCATGACGAAGAAGGAAAATTGGAGGAATGGAATAGGGTCA
AGGAGTAAAAGAATGGAGAGATCGAAGAGGAGGTCGTTAGTAGAAGAGGAGTTATTGCAT
AGACAAGCTTTGTCAATGGCAATTCAGCAGCATCAGTTGTCTCAAAGATTTGAGGGGTCA
ATTTCCAGACGTATTGGATCCACTACTTCTCGCCGTCGCACTGATTTGTCTGAATCCAAT
TCTAAGCAGTTACCAGAATTTTTGGAGAGCATCAAAACAAAGAAGTTCATTTTGGTACAT
GGAGAAGGATTCGGAGCTTGGTGTTGGTACAAAACTATTGCTCTATTGGAGGAAACAGGA
TTGCTTCCCACTGCCATAGATCTCACTGGATCTGGGATTGATCTGACAGATACAAAAGAT
GTTACAACACTGGCGGAGTACTCAAAACCATTGATTGATTATCTGGAAAACTTGCCTGAG
GATGAAAAGGTAATTTTGGTAGGTCACAGTATTGGAGGTTCTTGTGTTTCCTATGCCTTG
GAGCTTTTCCCACAGAAAATTGCGAAAGCAATATTTATTTGTGCTACAATGATATCTGAT
GGACAGAGGCCTTTTGATGTGTTTGCCGAAGAGCTTGGTTCGGCAGAGCTTTTCATGAAG
GAGTCTAAGTTTTTAATTTATGGGAATGGTAAAGAGAAGCCTCCTACTGGCTTCATGTTT
GAGAAGGAGCAGATGCATGGGCTGTATTTCAATCAATCTCCTGCAAAGGATATTGCTTTG
GCAATGGTTTCAATGAGAGCAATTCCTCTTGGTCCAATAATGGAGAAGCTATCATTGACA
CCTGACAAATATGGAACAAGTCATAGATTTTATGTCCAGACATTGGATGATCATGCTCTT
TCACCAGATGTTCAAGAAAAACTTTTGAGGGAAAATCCTCCTGGAGGTGTTTTCAAGATC
AAAGGCAGCGACCATTGCCCATTCTTTTCGAAGCCACAGTCGCTGCATAAGATTTTGGTT
GAGATTGCTCAGATTCCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400054335
PEP Infomation

pacid=37465561 transcript=PGSC0003DMT400080101 locus=PGSC0003DMG400031189 ID=PGSC0003DMT400080101.v4.03 annot-version=v4.03
Sequence

MGNRFICMTKKENWRNGIGSRSKRMERSKRRSLVEEELLHRQALSMAIQQHQLSQRFEGS
ISRRIGSTTSRRRTDLSESNSKQLPEFLESIKTKKFILVHGEGFGAWCWYKTIALLEETG
LLPTAIDLTGSGIDLTDTKDVTTLAEYSKPLIDYLENLPEDEKVILVGHSIGGSCVSYAL
ELFPQKIAKAIFICATMISDGQRPFDVFAEELGSAELFMKESKFLIYGNGKEKPPTGFMF
EKEQMHGLYFNQSPAKDIALAMVSMRAIPLGPIMEKLSLTPDKYGTSHRFYVQTLDDHAL
SPDVQEKLLRENPPGGVFKIKGSDHCPFFSKPQSLHKILVEIAQIP*

Transcript Sequence

Transcript ID

PGSC0003DMT400080101
Transcript Infomation

pacid=37465561 locus=PGSC0003DMG400031189 ID=PGSC0003DMT400080101.v4.03 annot-version=v4.03
Sequence

ATGGGGAATCGATTTATTTGCATGACGAAGAAGGAAAATTGGAGGAATGGAATAGGGTCA
AGGAGTAAAAGAATGGAGAGATCGAAGAGGAGGTCGTTAGTAGAAGAGGAGTTATTGCAT
AGACAAGCTTTGTCAATGGCAATTCAGCAGCATCAGTTGTCTCAAAGATTTGAGGGGTCA
ATTTCCAGACGTATTGGATCCACTACTTCTCGCCGTCGCACTGATTTGTCTGAATCCAAT
TCTAAGCAGTTACCAGAATTTTTGGAGAGCATCAAAACAAAGAAGTTCATTTTGGTACAT
GGAGAAGGATTCGGAGCTTGGTGTTGGTACAAAACTATTGCTCTATTGGAGGAAACAGGA
TTGCTTCCCACTGCCATAGATCTCACTGGATCTGGGATTGATCTGACAGATACAAAAGAT
GTTACAACACTGGCGGAGTACTCAAAACCATTGATTGATTATCTGGAAAACTTGCCTGAG
GATGAAAAGGTAATTTTGGTAGGTCACAGTATTGGAGGTTCTTGTGTTTCCTATGCCTTG
GAGCTTTTCCCACAGAAAATTGCGAAAGCAATATTTATTTGTGCTACAATGATATCTGAT
GGACAGAGGCCTTTTGATGTGTTTGCCGAAGAGCTTGGTTCGGCAGAGCTTTTCATGAAG
GAGTCTAAGTTTTTAATTTATGGGAATGGTAAAGAGAAGCCTCCTACTGGCTTCATGTTT
GAGAAGGAGCAGATGCATGGGCTGTATTTCAATCAATCTCCTGCAAAGGATATTGCTTTG
GCAATGGTTTCAATGAGAGCAATTCCTCTTGGTCCAATAATGGAGAAGCTATCATTGACA
CCTGACAAATATGGAACAAGTCATAGATTTTATGTCCAGACATTGGATGATCATGCTCTT
TCACCAGATGTTCAAGAAAAACTTTTGAGGGAAAATCCTCCTGGAGGTGTTTTCAAGATC
AAAGGCAGCGACCATTGCCCATTCTTTTCGAAGCCACAGTCGCTGCATAAGATTTTGGTT
GAGATTGCTCAGATTCCATAG