Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080071
CDS Infomation

pacid=37441354 polypeptide=PGSC0003DMP400054317 locus=PGSC0003DMG402031176 ID=PGSC0003DMT400080071.v4.03 annot-version=v4.03
Sequence

ATGGATGATAGAGGAGGATCGTTCGTGGCGGTGAGGAGGATATCTCAAGGACTTGAAAGA
GGCAATGCTTGTCATACAACTTCTGCGGAGGTTGTGGCAGGATCAGCAGCATGGCTAGGC
AGAGGCCTTTCATGTGTTTGTGTTCAAAGGAGGGAGAGCGATGCTCGTCCATCATTTGAT
TTAACTCCATCCCAGGAGGAATGTTTGCTAAGGCTACAAAACCGTATAGATGTTGCATAT
GATAGTTTAATCCTTGAACATCAGGAAGCTTTAAAAGCTTTGTGGAAAGTTGCCTTTCCT
GAGGAACAACTTCGTGGTTTGATATCTGAACAGTGGAAGGAAATGGGCTGGCAAGGAAAA
GATCCATCTACTGACTTTAGGGGTGGTGGATTTATATCACTGGAGAACTTGTTATATTTT
GCGAGGAATTTCCCGAAATCTTTCCAGGATCTTCTCCGAAAGCAGGAAGGTGATAGAGCA
ATTTGGGAATACCCATTCGCTGTTGCTGGCGTCAATATCACATTTATGCTTATCCAGATG
CTCGATCTGGAAGCTTTAAAACCTAGAAATCTGGTTGGAGCTACTTTCTTGAAGTTTCTT
GCAGAAAATGAATCAGCGTTTGATCTGCTATATTGCATCACATTTAAGCTGATGGATAAT
CAGTGGCTTGCCATGCGCGCATCATATATGGACTTCAATGCGGTCATGAAGGCTACTCGT
CGTCAACTAGAAGAGGAGCTTCTGCAAGAAGACATTACACGGCTAGAAGATTTACCATCA
TACAACCTTCTTAGTCGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400054317
PEP Infomation

pacid=37441354 transcript=PGSC0003DMT400080071 locus=PGSC0003DMG402031176 ID=PGSC0003DMT400080071.v4.03 annot-version=v4.03
Sequence

MDDRGGSFVAVRRISQGLERGNACHTTSAEVVAGSAAWLGRGLSCVCVQRRESDARPSFD
LTPSQEECLLRLQNRIDVAYDSLILEHQEALKALWKVAFPEEQLRGLISEQWKEMGWQGK
DPSTDFRGGGFISLENLLYFARNFPKSFQDLLRKQEGDRAIWEYPFAVAGVNITFMLIQM
LDLEALKPRNLVGATFLKFLAENESAFDLLYCITFKLMDNQWLAMRASYMDFNAVMKATR
RQLEEELLQEDITRLEDLPSYNLLSR*

Transcript Sequence

Transcript ID

PGSC0003DMT400080071
Transcript Infomation

pacid=37441354 locus=PGSC0003DMG402031176 ID=PGSC0003DMT400080071.v4.03 annot-version=v4.03
Sequence

ATGGATGATAGAGGAGGATCGTTCGTGGCGGTGAGGAGGATATCTCAAGGACTTGAAAGA
GGCAATGCTTGTCATACAACTTCTGCGGAGGTTGTGGCAGGATCAGCAGCATGGCTAGGC
AGAGGCCTTTCATGTGTTTGTGTTCAAAGGAGGGAGAGCGATGCTCGTCCATCATTTGAT
TTAACTCCATCCCAGGAGGAATGTTTGCTAAGGCTACAAAACCGTATAGATGTTGCATAT
GATAGTTTAATCCTTGAACATCAGGAAGCTTTAAAAGCTTTGTGGAAAGTTGCCTTTCCT
GAGGAACAACTTCGTGGTTTGATATCTGAACAGTGGAAGGAAATGGGCTGGCAAGGAAAA
GATCCATCTACTGACTTTAGGGGTGGTGGATTTATATCACTGGAGAACTTGTTATATTTT
GCGAGGAATTTCCCGAAATCTTTCCAGGATCTTCTCCGAAAGCAGGAAGGTGATAGAGCA
ATTTGGGAATACCCATTCGCTGTTGCTGGCGTCAATATCACATTTATGCTTATCCAGATG
CTCGATCTGGAAGCTTTAAAACCTAGAAATCTGGTTGGAGCTACTTTCTTGAAGTTTCTT
GCAGAAAATGAATCAGCGTTTGATCTGCTATATTGCATCACATTTAAGCTGATGGATAAT
CAGTGGCTTGCCATGCGCGCATCATATATGGACTTCAATGCGGTCATGAAGGCTACTCGT
CGTCAACTAGAAGAGGAGCTTCTGCAAGAAGACATTACACGGCTAGAAGATTTACCATCA
TACAACCTTCTTAGTCGATAG