Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080005
CDS Infomation

pacid=37474020 polypeptide=PGSC0003DMP400054274 locus=PGSC0003DMG400031153 ID=PGSC0003DMT400080005.v4.03 annot-version=v4.03
Sequence

ATGGCATGCTCCTTACAAAAAGCTATCACAGTTTGCTCTGTCTTCCGAAAAAGCTACTCT
TCCATTGTTGCTGTGTCTTCAAATGCCATCAGATTGACCTACAATAGCACATATGTTCCC
CAATATTTGGGAACAGAGTCCTCAATTTCATATGAAAACTATAAACCAGGAGGTGTGATG
TTTTCTCGACAGTTCGGTTCCAGTAGAGAGTCAGAGACATTATCTTGGGGAGTCTCATCT
GACGTTGTTTTGCTGGGAAAGCTTGAAAGTGCATTGAGGAATCACAACTTGGAAGAGGCT
TGGGAAACCTACAAGGATTTCAAACGTCTTTACGGTTTCCCTGACCCCTTTCTTGTAGAT
AAGCTTCTCACTAAGTTGTCGTACTCATCTGATTCTAGATGGCTTAAAAAGGCATGCAAT
ATGGTAGGATCTATTTTAAAAGAGAAAAGGGAGATGCTACGCACAGAGTTAATGACCAAG
CTCTGCCTATCGTTGGCTAGAGCTCAAATGCCCGTTCAAGCATCATCAATTCTCAGACTG
ATGTTGGACAAAGGAAACCTCCCACCTATTGACATGCTAGGGATGATAATATTTCACATG
GTGAAGACTGATACTGGAATGATTGTGTCATCAAACATTTTGATTGAGATATGTGGTAGC
TCTCAACAATTAACCACAAAGAAATCCACTTGCACTGAGTTAAATAAACATAATACACTT
CTTTTTAATCTTGTTCTTGATGCTTGTGCAAGATTTGGATCATCCAGTAAAGGCCATCAG
ATTATTGAGTTAATGGCCCAAGTTGGAGTGACAGCTGATGCTCATACTATTTCAATTATT
TCCTTGATCCATGAGATGAATGGTATGCGGGATGAATTAAAGAAATTTAAGAAGCATATA
GATCAGGTTTCAGTTCCATTGGTTTCCTGCTATCAGCAATTCTATGAAAGTCTCTTGTGT
TTACATTTCAAGTTTAATGATATTGATGCTGCTTCTGATCTTGTACAAGATATTTACGGA
TTTCAAGTGTCGCATCACGAGCAGGGAAATGAAACACAACCACCTAAACCGTGCATTGTT
GCTATTGGCTCTGATAATCTGAGAACGGGATTGAAGTTACGAATTTTTCCTCATTCATTA
TCAAGGGATTCTGTTTTCAATGTGGGACGTAATCAGGTGCTTGTTAAGTATAAGAATGGG
AAACTTGTCCTTAGCAACAGAGCATTGGCCAAGCTTATTATACAGTACAAGAGGGGTGGG
AGAATTAATGATCTATCAAAGCTTCTCTGTAGTATCCAGAAGAAGGGCTCAGTTGAATCT
AGCAGAATGTGCTCTGATGTGGTTGCTGCTTGCATTTGCATGGGTTGGCTTGAAATTGCT
CATGATATTTTGGATGATTTGGATTCTGAAGGAAATCCGCTGGACGCTAGTTCATACGTG
TCTCTGTTGACTGCATATTGCAACAATAATAAGCTAAGGGAGGCAGAGGCACTACTAAAG
CAATTAAGAAAATCAGGTGTCATAAATGCATCTGATCCATTGTTAGATCCTGCATCTATG
TGTGAACTGGAAAATGAAAGCAAGAAGAAGCTGAAAGAATTAGGCTCTTCGGCGAAAGGG
GAGCTGGCGTACCATATTGTTGAAGAAATGAGAGCTGAAGAAAATGAAGCTTCTTTTATG
ATGCATGATTTAAATTTTTCTATCTACTTTTTTATGAAGGCTCACATGGTTGAAGATGCC
GTTAGGGCTTACCGAAAAATGCAGGCAATGAAGATCCATCCTACAGTGTCAACTTTCATG
AATCTGCTTAACGGGTATTCTTCTTTAGGGATGTATCGTGAAATTACAATCTTGTGGGGA
GATATTAAAAGGAACATGGAAAGTCATAAGAACTTGAATACCAGGGATTTATACGAGTTC
TTGCTGTTGAATTTTCTTCGAGGCGGTTATTTTCATAGGGTGATGGAGGTTATTGGTTTA
ATGAAAGAAAATGGCATGTATTTGGACAAGTGGATGTATAGACGTGAGTTCTTGAAATAT
CACAAGGGTCTTTACCTAAGAATAAAAGTATCTGATGCTAAAAATGACGTACAAACTCAG
AGGATTGAGCATGTGAGGCACTTTAGGAAGTGGGTTGGCCTGGATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400054274
PEP Infomation

pacid=37474020 transcript=PGSC0003DMT400080005 locus=PGSC0003DMG400031153 ID=PGSC0003DMT400080005.v4.03 annot-version=v4.03
Sequence

MACSLQKAITVCSVFRKSYSSIVAVSSNAIRLTYNSTYVPQYLGTESSISYENYKPGGVM
FSRQFGSSRESETLSWGVSSDVVLLGKLESALRNHNLEEAWETYKDFKRLYGFPDPFLVD
KLLTKLSYSSDSRWLKKACNMVGSILKEKREMLRTELMTKLCLSLARAQMPVQASSILRL
MLDKGNLPPIDMLGMIIFHMVKTDTGMIVSSNILIEICGSSQQLTTKKSTCTELNKHNTL
LFNLVLDACARFGSSSKGHQIIELMAQVGVTADAHTISIISLIHEMNGMRDELKKFKKHI
DQVSVPLVSCYQQFYESLLCLHFKFNDIDAASDLVQDIYGFQVSHHEQGNETQPPKPCIV
AIGSDNLRTGLKLRIFPHSLSRDSVFNVGRNQVLVKYKNGKLVLSNRALAKLIIQYKRGG
RINDLSKLLCSIQKKGSVESSRMCSDVVAACICMGWLEIAHDILDDLDSEGNPLDASSYV
SLLTAYCNNNKLREAEALLKQLRKSGVINASDPLLDPASMCELENESKKKLKELGSSAKG
ELAYHIVEEMRAEENEASFMMHDLNFSIYFFMKAHMVEDAVRAYRKMQAMKIHPTVSTFM
NLLNGYSSLGMYREITILWGDIKRNMESHKNLNTRDLYEFLLLNFLRGGYFHRVMEVIGL
MKENGMYLDKWMYRREFLKYHKGLYLRIKVSDAKNDVQTQRIEHVRHFRKWVGLD*

Transcript Sequence

Transcript ID

PGSC0003DMT400080005
Transcript Infomation

pacid=37474020 locus=PGSC0003DMG400031153 ID=PGSC0003DMT400080005.v4.03 annot-version=v4.03
Sequence

ATGGCATGCTCCTTACAAAAAGCTATCACAGTTTGCTCTGTCTTCCGAAAAAGCTACTCT
TCCATTGTTGCTGTGTCTTCAAATGCCATCAGATTGACCTACAATAGCACATATGTTCCC
CAATATTTGGGAACAGAGTCCTCAATTTCATATGAAAACTATAAACCAGGAGGTGTGATG
TTTTCTCGACAGTTCGGTTCCAGTAGAGAGTCAGAGACATTATCTTGGGGAGTCTCATCT
GACGTTGTTTTGCTGGGAAAGCTTGAAAGTGCATTGAGGAATCACAACTTGGAAGAGGCT
TGGGAAACCTACAAGGATTTCAAACGTCTTTACGGTTTCCCTGACCCCTTTCTTGTAGAT
AAGCTTCTCACTAAGTTGTCGTACTCATCTGATTCTAGATGGCTTAAAAAGGCATGCAAT
ATGGTAGGATCTATTTTAAAAGAGAAAAGGGAGATGCTACGCACAGAGTTAATGACCAAG
CTCTGCCTATCGTTGGCTAGAGCTCAAATGCCCGTTCAAGCATCATCAATTCTCAGACTG
ATGTTGGACAAAGGAAACCTCCCACCTATTGACATGCTAGGGATGATAATATTTCACATG
GTGAAGACTGATACTGGAATGATTGTGTCATCAAACATTTTGATTGAGATATGTGGTAGC
TCTCAACAATTAACCACAAAGAAATCCACTTGCACTGAGTTAAATAAACATAATACACTT
CTTTTTAATCTTGTTCTTGATGCTTGTGCAAGATTTGGATCATCCAGTAAAGGCCATCAG
ATTATTGAGTTAATGGCCCAAGTTGGAGTGACAGCTGATGCTCATACTATTTCAATTATT
TCCTTGATCCATGAGATGAATGGTATGCGGGATGAATTAAAGAAATTTAAGAAGCATATA
GATCAGGTTTCAGTTCCATTGGTTTCCTGCTATCAGCAATTCTATGAAAGTCTCTTGTGT
TTACATTTCAAGTTTAATGATATTGATGCTGCTTCTGATCTTGTACAAGATATTTACGGA
TTTCAAGTGTCGCATCACGAGCAGGGAAATGAAACACAACCACCTAAACCGTGCATTGTT
GCTATTGGCTCTGATAATCTGAGAACGGGATTGAAGTTACGAATTTTTCCTCATTCATTA
TCAAGGGATTCTGTTTTCAATGTGGGACGTAATCAGGTGCTTGTTAAGTATAAGAATGGG
AAACTTGTCCTTAGCAACAGAGCATTGGCCAAGCTTATTATACAGTACAAGAGGGGTGGG
AGAATTAATGATCTATCAAAGCTTCTCTGTAGTATCCAGAAGAAGGGCTCAGTTGAATCT
AGCAGAATGTGCTCTGATGTGGTTGCTGCTTGCATTTGCATGGGTTGGCTTGAAATTGCT
CATGATATTTTGGATGATTTGGATTCTGAAGGAAATCCGCTGGACGCTAGTTCATACGTG
TCTCTGTTGACTGCATATTGCAACAATAATAAGCTAAGGGAGGCAGAGGCACTACTAAAG
CAATTAAGAAAATCAGGTGTCATAAATGCATCTGATCCATTGTTAGATCCTGCATCTATG
TGTGAACTGGAAAATGAAAGCAAGAAGAAGCTGAAAGAATTAGGCTCTTCGGCGAAAGGG
GAGCTGGCGTACCATATTGTTGAAGAAATGAGAGCTGAAGAAAATGAAGCTTCTTTTATG
ATGCATGATTTAAATTTTTCTATCTACTTTTTTATGAAGGCTCACATGGTTGAAGATGCC
GTTAGGGCTTACCGAAAAATGCAGGCAATGAAGATCCATCCTACAGTGTCAACTTTCATG
AATCTGCTTAACGGGTATTCTTCTTTAGGGATGTATCGTGAAATTACAATCTTGTGGGGA
GATATTAAAAGGAACATGGAAAGTCATAAGAACTTGAATACCAGGGATTTATACGAGTTC
TTGCTGTTGAATTTTCTTCGAGGCGGTTATTTTCATAGGGTGATGGAGGTTATTGGTTTA
ATGAAAGAAAATGGCATGTATTTGGACAAGTGGATGTATAGACGTGAGTTCTTGAAATAT
CACAAGGGTCTTTACCTAAGAATAAAAGTATCTGATGCTAAAAATGACGTACAAACTCAG
AGGATTGAGCATGTGAGGCACTTTAGGAAGTGGGTTGGCCTGGATTAG