Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079931
CDS Infomation

pacid=37439735 polypeptide=PGSC0003DMP400054228 locus=PGSC0003DMG400031128 ID=PGSC0003DMT400079931.v4.03 annot-version=v4.03
Sequence

ATGAGAGAAGAGAAAACATTCTCCTTCTTTCTTCTACTATTCTTTATCTTAATTTCTCAA
ACAACAGCCACAAATTACCCAATCAATGTCTGGCCCAAGCCCACAACATTCCAATGGCCC
AACCCAAAATCAATCTTCCTCTCCTCAACCTTCACCATCTCCCACCCGTACCACCGGTAC
CTCACTCCCGCCGTCGACCGTTACCGCCACCTAATCCTCTCAGAGCACCACCGTCCCATC
ATCACTCCGGCGATCAACATAACTTCATCAATCCCGTTGCAAAGCCTCATCATCTCCGTC
TCCGATGTCACTTCACCGCTCGCTCACGGAGTCAACGAATCCTACTCTCTCTCCACACCT
TCCGACGGCTCCGCCTCCGCCTACATCACTGCGGAGACTGTATGGGGAGCCATGCGAGGG
CTGGAGACATTCTCACAGCTCGTGTACGGAAACCCTACCAGAGTTGCAGCCGGCGTGTAC
ATACACGATCTGCCGATTTTCACTCACAGAGGTGTGGTGTTGGACACTTCGAGAAATTTC
TACGGAGTCGATCACTTGTTAAGGCTTATTAAAGCTATGAGTATGAACAAGTTGAATGTT
TTCCACTGGCACATAACTGATTCACATTCATTTCCGCTTGTGATTCCATCGGAGCCGAAG
CTCGCCGGAAAAGGAGCGTACAGCAACGAGATGATGTATTCGCCGGCGGACGTGCAGAAG
ATCGTGCAATATGGAATGGAACACGGAGTTAGGGTTTTACCTGAAATTGACATGCCTGCA
CATACAGGATCGTGGGCTGAAGCTTACCCTGAGATAGTCACTTGTGCAAATATGTTCTGG
TGGCCCGCTGGAAGTAGTCCAGCTCTTGCAGCTGAACCAGGCACTGGCCAACTGAACCCC
TTGATTCCCAAGACCTATGAAGTAGTCAAGAATGTCATCCGGGACACTATCGCCATGTTT
CCAGATTCACTCTTTCACGGAGGAGCAGATGAGATCAATTCAGACTGTTGGAATACTGAT
CCATCAGTCCAAAAGTTTGTTGCTAGCAATGGAACTCTCAGTCAGCTACTCGAGAAGTTT
ATCAATAATACCTTACCTGAAATCCTCTCACTCAACCGTACGGTGGTCTACTGGGAGGAT
GTTATATTGAGTGGTAATGTGAAAGTGAATCCTTCTCTGCTTCCTCCACAGAATGTTATC
ATGCAAACTTGGAATAATGGACCAAACAATACAAAGCAGCTTGTCACTTCTGGCTACCGT
GTCATTGTGTCATCTGCAGATTACTATTACTTGGATTGTGGCCATGGAAGCTTCGTTGGA
AATGACAGCCGCTATGATCAGCCACCAGGTACTGACCAAGGCAATGGTGGATCCTGGTGT
GGACCTTTCAAGACGTGGGAAACCATTTACAACTATGATATAACCTACGGCCTAACTGAT
GAGGAGGCTCAGTTGGTAATTGGAGGGGAAGTAGCATTATGGTCCGAACAAGCTGATTCA
ACTGTTATGGACTCGCGAATTTGGCCAAGAGCATCAGCAATGGCAGAAACCTTGTGGTCA
GGGAATCGCGATGAAACAGGAATGAAGAGATATGCAGAGGCTACTGATCGACTGAATGAA
TGGAGGTACAGAATGGTTTCTAGAGGAATAGGTGCTGAACCGATTCAACCACTTTGGTGT
CTCAAAAACCCAGGAATGTGTAACACAGTTCATTCATTTACTAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400054228
PEP Infomation

pacid=37439735 transcript=PGSC0003DMT400079931 locus=PGSC0003DMG400031128 ID=PGSC0003DMT400079931.v4.03 annot-version=v4.03
Sequence

MREEKTFSFFLLLFFILISQTTATNYPINVWPKPTTFQWPNPKSIFLSSTFTISHPYHRY
LTPAVDRYRHLILSEHHRPIITPAINITSSIPLQSLIISVSDVTSPLAHGVNESYSLSTP
SDGSASAYITAETVWGAMRGLETFSQLVYGNPTRVAAGVYIHDLPIFTHRGVVLDTSRNF
YGVDHLLRLIKAMSMNKLNVFHWHITDSHSFPLVIPSEPKLAGKGAYSNEMMYSPADVQK
IVQYGMEHGVRVLPEIDMPAHTGSWAEAYPEIVTCANMFWWPAGSSPALAAEPGTGQLNP
LIPKTYEVVKNVIRDTIAMFPDSLFHGGADEINSDCWNTDPSVQKFVASNGTLSQLLEKF
INNTLPEILSLNRTVVYWEDVILSGNVKVNPSLLPPQNVIMQTWNNGPNNTKQLVTSGYR
VIVSSADYYYLDCGHGSFVGNDSRYDQPPGTDQGNGGSWCGPFKTWETIYNYDITYGLTD
EEAQLVIGGEVALWSEQADSTVMDSRIWPRASAMAETLWSGNRDETGMKRYAEATDRLNE
WRYRMVSRGIGAEPIQPLWCLKNPGMCNTVHSFTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400079931
Transcript Infomation

pacid=37439735 locus=PGSC0003DMG400031128 ID=PGSC0003DMT400079931.v4.03 annot-version=v4.03
Sequence

ATGAGAGAAGAGAAAACATTCTCCTTCTTTCTTCTACTATTCTTTATCTTAATTTCTCAA
ACAACAGCCACAAATTACCCAATCAATGTCTGGCCCAAGCCCACAACATTCCAATGGCCC
AACCCAAAATCAATCTTCCTCTCCTCAACCTTCACCATCTCCCACCCGTACCACCGGTAC
CTCACTCCCGCCGTCGACCGTTACCGCCACCTAATCCTCTCAGAGCACCACCGTCCCATC
ATCACTCCGGCGATCAACATAACTTCATCAATCCCGTTGCAAAGCCTCATCATCTCCGTC
TCCGATGTCACTTCACCGCTCGCTCACGGAGTCAACGAATCCTACTCTCTCTCCACACCT
TCCGACGGCTCCGCCTCCGCCTACATCACTGCGGAGACTGTATGGGGAGCCATGCGAGGG
CTGGAGACATTCTCACAGCTCGTGTACGGAAACCCTACCAGAGTTGCAGCCGGCGTGTAC
ATACACGATCTGCCGATTTTCACTCACAGAGGTGTGGTGTTGGACACTTCGAGAAATTTC
TACGGAGTCGATCACTTGTTAAGGCTTATTAAAGCTATGAGTATGAACAAGTTGAATGTT
TTCCACTGGCACATAACTGATTCACATTCATTTCCGCTTGTGATTCCATCGGAGCCGAAG
CTCGCCGGAAAAGGAGCGTACAGCAACGAGATGATGTATTCGCCGGCGGACGTGCAGAAG
ATCGTGCAATATGGAATGGAACACGGAGTTAGGGTTTTACCTGAAATTGACATGCCTGCA
CATACAGGATCGTGGGCTGAAGCTTACCCTGAGATAGTCACTTGTGCAAATATGTTCTGG
TGGCCCGCTGGAAGTAGTCCAGCTCTTGCAGCTGAACCAGGCACTGGCCAACTGAACCCC
TTGATTCCCAAGACCTATGAAGTAGTCAAGAATGTCATCCGGGACACTATCGCCATGTTT
CCAGATTCACTCTTTCACGGAGGAGCAGATGAGATCAATTCAGACTGTTGGAATACTGAT
CCATCAGTCCAAAAGTTTGTTGCTAGCAATGGAACTCTCAGTCAGCTACTCGAGAAGTTT
ATCAATAATACCTTACCTGAAATCCTCTCACTCAACCGTACGGTGGTCTACTGGGAGGAT
GTTATATTGAGTGGTAATGTGAAAGTGAATCCTTCTCTGCTTCCTCCACAGAATGTTATC
ATGCAAACTTGGAATAATGGACCAAACAATACAAAGCAGCTTGTCACTTCTGGCTACCGT
GTCATTGTGTCATCTGCAGATTACTATTACTTGGATTGTGGCCATGGAAGCTTCGTTGGA
AATGACAGCCGCTATGATCAGCCACCAGGTACTGACCAAGGCAATGGTGGATCCTGGTGT
GGACCTTTCAAGACGTGGGAAACCATTTACAACTATGATATAACCTACGGCCTAACTGAT
GAGGAGGCTCAGTTGGTAATTGGAGGGGAAGTAGCATTATGGTCCGAACAAGCTGATTCA
ACTGTTATGGACTCGCGAATTTGGCCAAGAGCATCAGCAATGGCAGAAACCTTGTGGTCA
GGGAATCGCGATGAAACAGGAATGAAGAGATATGCAGAGGCTACTGATCGACTGAATGAA
TGGAGGTACAGAATGGTTTCTAGAGGAATAGGTGCTGAACCGATTCAACCACTTTGGTGT
CTCAAAAACCCAGGAATGTGTAACACAGTTCATTCATTTACTAGCTGA