Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079910
CDS Infomation

pacid=37437265 polypeptide=PGSC0003DMP400054210 locus=PGSC0003DMG400031122 ID=PGSC0003DMT400079910.v4.03 annot-version=v4.03
Sequence

ATGGCGACTTTGGTTCGATCAGTTGCTCGTAGTTTGAGGAGAAAGAACTTATCTTCAATG
TATTGCCCTGCCTCTACATTGCAGTCACATGCCACCAGTTTTGGTTTTAAGGACGTAGCA
GAAGAAGAAAAGAGTAAGATGGTTGGGAATGTCTTTACCAGTGTTGCTTCAAACTATGAT
CTCATGAATGATCTAATGAGTTGTGGACTTCATCGTTTGTGGAAGGACAGATTGGTTTCG
AAGTTGAATCCGTTTCCAGGAATGAAGCATCTTGATGTGGCTGGTGGAACAGGGGATGTT
GCTTTCAGGATCCTTGAAAATATAAAAAATGTCAAACGCAGAGCTATGCAAGATGTTCTT
GATGATGAGCTGATTGAAGAAAGTAGAATTTATGTATGTGACATCAATCCAAACATGTTG
GGTGTGGGTAAGAAGAGGGCCGAAGAGAGAGGTTTTGGACTGGAGAAGTCTCTCGATTGG
GTAGAGGGAGATGCAGAAGCCTTGAGCTTTGAAGACAACTCAATGGATGGTTACACAATT
GCTTTTGGTATCAGGAATGTTACACACATAGAGAAAGTTCTTGCAGAAGCATATAGGGTG
CTTAAAAGGGGAGGAAGGTTTCTTTGCCTTGAACTAAGCCACGTTGATATCCCGGTTTAT
AAGGACTTGTATGATGTCTACTCATTCTCAGTCATCCCAGCAGTTGGTGAGCTAGTGACA
GGTGATAGAGAGTCTTATCAGTACTTGGTTGAGAGCGTCCGCCGTTTCCCTCCACAGGAA
CAATTTGCAAAAATGATTGCAGAAGCTGGATTTCAAAAGGTAGAATACGAGAACCTTGTT
GGTGGAGTTGTCGCAATCCATTCAGGGGTGAAGTTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400054210
PEP Infomation

pacid=37437265 transcript=PGSC0003DMT400079910 locus=PGSC0003DMG400031122 ID=PGSC0003DMT400079910.v4.03 annot-version=v4.03
Sequence

MATLVRSVARSLRRKNLSSMYCPASTLQSHATSFGFKDVAEEEKSKMVGNVFTSVASNYD
LMNDLMSCGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILENIKNVKRRAMQDVL
DDELIEESRIYVCDINPNMLGVGKKRAEERGFGLEKSLDWVEGDAEALSFEDNSMDGYTI
AFGIRNVTHIEKVLAEAYRVLKRGGRFLCLELSHVDIPVYKDLYDVYSFSVIPAVGELVT
GDRESYQYLVESVRRFPPQEQFAKMIAEAGFQKVEYENLVGGVVAIHSGVKF*

Transcript Sequence

Transcript ID

PGSC0003DMT400079910
Transcript Infomation

pacid=37437265 locus=PGSC0003DMG400031122 ID=PGSC0003DMT400079910.v4.03 annot-version=v4.03
Sequence

ATGGCGACTTTGGTTCGATCAGTTGCTCGTAGTTTGAGGAGAAAGAACTTATCTTCAATG
TATTGCCCTGCCTCTACATTGCAGTCACATGCCACCAGTTTTGGTTTTAAGGACGTAGCA
GAAGAAGAAAAGAGTAAGATGGTTGGGAATGTCTTTACCAGTGTTGCTTCAAACTATGAT
CTCATGAATGATCTAATGAGTTGTGGACTTCATCGTTTGTGGAAGGACAGATTGGTTTCG
AAGTTGAATCCGTTTCCAGGAATGAAGCATCTTGATGTGGCTGGTGGAACAGGGGATGTT
GCTTTCAGGATCCTTGAAAATATAAAAAATGTCAAACGCAGAGCTATGCAAGATGTTCTT
GATGATGAGCTGATTGAAGAAAGTAGAATTTATGTATGTGACATCAATCCAAACATGTTG
GGTGTGGGTAAGAAGAGGGCCGAAGAGAGAGGTTTTGGACTGGAGAAGTCTCTCGATTGG
GTAGAGGGAGATGCAGAAGCCTTGAGCTTTGAAGACAACTCAATGGATGGTTACACAATT
GCTTTTGGTATCAGGAATGTTACACACATAGAGAAAGTTCTTGCAGAAGCATATAGGGTG
CTTAAAAGGGGAGGAAGGTTTCTTTGCCTTGAACTAAGCCACGTTGATATCCCGGTTTAT
AAGGACTTGTATGATGTCTACTCATTCTCAGTCATCCCAGCAGTTGGTGAGCTAGTGACA
GGTGATAGAGAGTCTTATCAGTACTTGGTTGAGAGCGTCCGCCGTTTCCCTCCACAGGAA
CAATTTGCAAAAATGATTGCAGAAGCTGGATTTCAAAAGGTAGAATACGAGAACCTTGTT
GGTGGAGTTGTCGCAATCCATTCAGGGGTGAAGTTCTAG