Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079895
CDS Infomation

pacid=37440064 polypeptide=PGSC0003DMP400054198 locus=PGSC0003DMG400031117 ID=PGSC0003DMT400079895.v4.03 annot-version=v4.03
Sequence

ATGGAAGGACAAAATCAAGGAGGAGGAGAAGTGAGAAGACTTCATATCATATATTTTTTG
AGTAGAAAAGGTCGTATTGAACATCCTCATCTCATTAGAGTTCATCATTTCTCTAGAAAT
GGCATTCGTCTCAAAGATATTAAGAGATGGTTGGGAGAGTTGCGAGGAAAAGACATGCCT
GAATCTTTTGCTTGGTCATATAAGAGGAAATACAAAACAGGATATGTATGGCAAGACTTA
TTGGATGAAGATCTCATTACTCCAATATCGGACAATGAATATGTCCTTAAAGGATCTGAA
ATTCCATCCATCACCACAATTAAAGATGTTTCATGTGGTGAAAAAGAAGTAACAACAGCA
ATCATGCAAAAGGAACAAACAAAACAAGAAGATCAAGATCAAGTTTTTCTCATGGATTCA
TCAAAGAAAATCTCTTTAGAAATCGAACAAGACTCTCAAAATAATATTTCTTCTGAAACA
TCCACACTCACCACAAATTCACCAAAATTCGAAGAAGAAGAAAAAGTTGGTAACAAAATC
GAGAACAATTCTTCTTTTTCTTCTAATTCTTCTTCTTCTATTTCTTCTTTTGGTTCGATG
AAAACCAAGAAGAAAACAGAGGATAGTGAAGAAAAAATAGACACTAGTCAGAATACTGAA
AAAACATCGAAAATTCCCAAATTCAATAAGAGTAGAAGCTATTCAAATGGAGCTTCAAGT
ATTTTCAGGAATTTGATTACTTGTGGCGCTGTTGATACTAATGACTCTGGAATTATTCCA
CTCAAAAAAAATAAAACTTCTGCTGGTGGTGAAAAAACAGTTAGTTTTTCATCAGAGATC
TGTAAAGCTGATAAAATTGGAGGATCTCAGAGGATTTTTGGGACTGCTTGGAATCAACAA
CAGACTAATGCAAGGAAAAGCTGTGATGGGGCATTCAGTATGTCAAAGAATAAAAGTGAA
TTTGGTAGTCGTAGATCAGTTTCTGCTAATTATAAGCCAATCCATGGACCCAACTGCTCG
CAATGTGGAAAGCCATTCAAGCCAGAGAAACTTCATGCCCACATGAAGTCCTGCAAAGGG
ATGAAAGCTCTGTCAAAGGGTGCTGCTACTGACAAGACATCCAAAAATGCACCAAAAATA
GATTCTCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400054198
PEP Infomation

pacid=37440064 transcript=PGSC0003DMT400079895 locus=PGSC0003DMG400031117 ID=PGSC0003DMT400079895.v4.03 annot-version=v4.03
Sequence

MEGQNQGGGEVRRLHIIYFLSRKGRIEHPHLIRVHHFSRNGIRLKDIKRWLGELRGKDMP
ESFAWSYKRKYKTGYVWQDLLDEDLITPISDNEYVLKGSEIPSITTIKDVSCGEKEVTTA
IMQKEQTKQEDQDQVFLMDSSKKISLEIEQDSQNNISSETSTLTTNSPKFEEEEKVGNKI
ENNSSFSSNSSSSISSFGSMKTKKKTEDSEEKIDTSQNTEKTSKIPKFNKSRSYSNGASS
IFRNLITCGAVDTNDSGIIPLKKNKTSAGGEKTVSFSSEICKADKIGGSQRIFGTAWNQQ
QTNARKSCDGAFSMSKNKSEFGSRRSVSANYKPIHGPNCSQCGKPFKPEKLHAHMKSCKG
MKALSKGAATDKTSKNAPKIDSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400079895
Transcript Infomation

pacid=37440064 locus=PGSC0003DMG400031117 ID=PGSC0003DMT400079895.v4.03 annot-version=v4.03
Sequence

ATGGAAGGACAAAATCAAGGAGGAGGAGAAGTGAGAAGACTTCATATCATATATTTTTTG
AGTAGAAAAGGTCGTATTGAACATCCTCATCTCATTAGAGTTCATCATTTCTCTAGAAAT
GGCATTCGTCTCAAAGATATTAAGAGATGGTTGGGAGAGTTGCGAGGAAAAGACATGCCT
GAATCTTTTGCTTGGTCATATAAGAGGAAATACAAAACAGGATATGTATGGCAAGACTTA
TTGGATGAAGATCTCATTACTCCAATATCGGACAATGAATATGTCCTTAAAGGATCTGAA
ATTCCATCCATCACCACAATTAAAGATGTTTCATGTGGTGAAAAAGAAGTAACAACAGCA
ATCATGCAAAAGGAACAAACAAAACAAGAAGATCAAGATCAAGTTTTTCTCATGGATTCA
TCAAAGAAAATCTCTTTAGAAATCGAACAAGACTCTCAAAATAATATTTCTTCTGAAACA
TCCACACTCACCACAAATTCACCAAAATTCGAAGAAGAAGAAAAAGTTGGTAACAAAATC
GAGAACAATTCTTCTTTTTCTTCTAATTCTTCTTCTTCTATTTCTTCTTTTGGTTCGATG
AAAACCAAGAAGAAAACAGAGGATAGTGAAGAAAAAATAGACACTAGTCAGAATACTGAA
AAAACATCGAAAATTCCCAAATTCAATAAGAGTAGAAGCTATTCAAATGGAGCTTCAAGT
ATTTTCAGGAATTTGATTACTTGTGGCGCTGTTGATACTAATGACTCTGGAATTATTCCA
CTCAAAAAAAATAAAACTTCTGCTGGTGGTGAAAAAACAGTTAGTTTTTCATCAGAGATC
TGTAAAGCTGATAAAATTGGAGGATCTCAGAGGATTTTTGGGACTGCTTGGAATCAACAA
CAGACTAATGCAAGGAAAAGCTGTGATGGGGCATTCAGTATGTCAAAGAATAAAAGTGAA
TTTGGTAGTCGTAGATCAGTTTCTGCTAATTATAAGCCAATCCATGGACCCAACTGCTCG
CAATGTGGAAAGCCATTCAAGCCAGAGAAACTTCATGCCCACATGAAGTCCTGCAAAGGG
ATGAAAGCTCTGTCAAAGGGTGCTGCTACTGACAAGACATCCAAAAATGCACCAAAAATA
GATTCTCTTTGA