Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079883
CDS Infomation

pacid=37438084 polypeptide=PGSC0003DMP400054187 locus=PGSC0003DMG400031111 ID=PGSC0003DMT400079883.v4.03 annot-version=v4.03
Sequence

ATGTCTTACTTATTGCCACAGTTCCTGAGCTTGCCCGATGCTTTTGTCATTTGCGCTAAA
ACCCAACAGCAAACAACCATCCAGCTTTCAAAAAGTAGAGACCATATTCATTTGAGGACA
CAATGCATCCTATCCACTACATCTGCAGTAACATCAACTGCAACTTCTACTGTGCTTGGC
ATTGAGAAACTACAGTTACCATCTATTGAAATCCTCTCAAATTCAGTCGCGGCAGAGAGA
TCATGGAAATCACCATCAGCTGCCACAACCACAGTACCTGATATACAGAAGCTAAAGCTG
CCGTCTTTTGAGGCCAACCCAGATTCAGTTGCCCCAGATAGGCCGTGGACATACACTGGG
GCAGTTGGTCCACCTGCAGAGGCGAACACTAAACCTGAAAATTCTCTTGCTAGTGAGGAA
GCTATTGTAGCTGCTGCAGCCGCTGAAGCAGTTGCTTTAGCAAAGGCTGCATTGAAGGGT
GCACAAGATGCTGTAATGCTGGTCGGCTATAATAATTTAAATGACTCCGATAATGTTGGC
AGAGGTACGCTATCAGAAGCTAGGACTGCTCCATTTGAGAGCGTTCATCTGGCTCAACCT
GGTGAGACAAGGAGAGTTGGTGTTTGTGCGGAATTAAATGGAAGTGAGATGAAGTGGACT
GGAAGTAGTTTATTCCGGGAGACTCTTACAGATTCTGATGACTTGGAGCCATCACCTGAA
GAACTGGAAATTCTTCAGTCACAGCTGTCGAATGTCATAGCTGTAAAATCGAACCGTCAA
ACTGAGCGGAAGGCCAAAAGAGCTAAATCAGTAGAGAAGGCTGCAGCTAATGTTGTGACT
GTGAAGTCTGGTTCTACCAGTCGAAAGAAGCGTGCTTCAGTACAAGATGTTGATTACTCG
GATCCATTGCGTTACTTGAGAGGAACTACATGTAGTTCTAGGCTACTGACTGCATCTGAA
GAACAGGAGTTATCAAGAGGAATCCAGGACCTGTTGAAGTTGGAAAGACTTCAGGTGGAG
CTTACAGAGCGTTGCGGAGGTCAGCCCACTTTTACCCAATGGGCTGCTGCTGCCGGAGTT
GACCAGATGACCCTAAGGAAGCGTTTGAACTATGGCATTCTTTGTAAAGATAAAATGATT
AAGAGCAACGTGAGGCTCGTTATTTCTATTGCCAAAAATTATCAAGGAGTAGGGATGAAT
CTTCAAGATTTGGTTCAGGAAGGATGTCGGGGCCTTGTTAGAGGAGCTGAAAAATTTGAT
GCCACCAAGGGTTTTAAGTTCTCAACTTATGCTCACTGGTGGATTAAGCAGGCTGTTAGG
AAATCTCTCTCTGATCAGTCCAGGATGATTCGGTTGCCATTTCACATGGTCGAGGCTACT
TATAGAGTAAAGGAAGCAAGAAAGCAATTGTTGACTGAAAATGGTAGACATCCTAACGAT
GCAGAAGTAGCTGAAGCAGCAGGGTTGTCAATGAAGAGACTTGCTGCTGTGATGTTAACT
CCTAAAGCTCCAAGATCACTTGACCAGAAAATTGGGTTCAATGAAAGTCTCAAACCTTCG
GAAGTGCTTGCAGACCCTGAAGCGGAAACATCAGAAGAAATACTGACCAAGCAGTTCATG
AGACAGGACCTGGAGAAGGTATTAGACACCTTAAATCCAAGGGAGAAGCAGGTCGTTAGA
TGGCGGTTTGGACTAGAGGATGGCAGGATGAAGACATTACAAGAGATTGGTGAGTTAATG
GGCGTTAGCCGGGAGAGAATTCGCCAAATAGAGTCTTGTGCATTCCGTAAGTTGAAGAAC
AAGAAAAGAACAAAGTTTTTGCAGCAATATATAAATGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400054187
PEP Infomation

pacid=37438084 transcript=PGSC0003DMT400079883 locus=PGSC0003DMG400031111 ID=PGSC0003DMT400079883.v4.03 annot-version=v4.03
Sequence

MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDHIHLRTQCILSTTSAVTSTATSTVLG
IEKLQLPSIEILSNSVAAERSWKSPSAATTTVPDIQKLKLPSFEANPDSVAPDRPWTYTG
AVGPPAEANTKPENSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNNLNDSDNVG
RGTLSEARTAPFESVHLAQPGETRRVGVCAELNGSEMKWTGSSLFRETLTDSDDLEPSPE
ELEILQSQLSNVIAVKSNRQTERKAKRAKSVEKAAANVVTVKSGSTSRKKRASVQDVDYS
DPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGV
DQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFD
ATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLLTENGRHPND
AEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGFNESLKPSEVLADPEAETSEEILTKQFM
RQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKN
KKRTKFLQQYINA*

Transcript Sequence

Transcript ID

PGSC0003DMT400079883
Transcript Infomation

pacid=37438084 locus=PGSC0003DMG400031111 ID=PGSC0003DMT400079883.v4.03 annot-version=v4.03
Sequence

ATGTCTTACTTATTGCCACAGTTCCTGAGCTTGCCCGATGCTTTTGTCATTTGCGCTAAA
ACCCAACAGCAAACAACCATCCAGCTTTCAAAAAGTAGAGACCATATTCATTTGAGGACA
CAATGCATCCTATCCACTACATCTGCAGTAACATCAACTGCAACTTCTACTGTGCTTGGC
ATTGAGAAACTACAGTTACCATCTATTGAAATCCTCTCAAATTCAGTCGCGGCAGAGAGA
TCATGGAAATCACCATCAGCTGCCACAACCACAGTACCTGATATACAGAAGCTAAAGCTG
CCGTCTTTTGAGGCCAACCCAGATTCAGTTGCCCCAGATAGGCCGTGGACATACACTGGG
GCAGTTGGTCCACCTGCAGAGGCGAACACTAAACCTGAAAATTCTCTTGCTAGTGAGGAA
GCTATTGTAGCTGCTGCAGCCGCTGAAGCAGTTGCTTTAGCAAAGGCTGCATTGAAGGGT
GCACAAGATGCTGTAATGCTGGTCGGCTATAATAATTTAAATGACTCCGATAATGTTGGC
AGAGGTACGCTATCAGAAGCTAGGACTGCTCCATTTGAGAGCGTTCATCTGGCTCAACCT
GGTGAGACAAGGAGAGTTGGTGTTTGTGCGGAATTAAATGGAAGTGAGATGAAGTGGACT
GGAAGTAGTTTATTCCGGGAGACTCTTACAGATTCTGATGACTTGGAGCCATCACCTGAA
GAACTGGAAATTCTTCAGTCACAGCTGTCGAATGTCATAGCTGTAAAATCGAACCGTCAA
ACTGAGCGGAAGGCCAAAAGAGCTAAATCAGTAGAGAAGGCTGCAGCTAATGTTGTGACT
GTGAAGTCTGGTTCTACCAGTCGAAAGAAGCGTGCTTCAGTACAAGATGTTGATTACTCG
GATCCATTGCGTTACTTGAGAGGAACTACATGTAGTTCTAGGCTACTGACTGCATCTGAA
GAACAGGAGTTATCAAGAGGAATCCAGGACCTGTTGAAGTTGGAAAGACTTCAGGTGGAG
CTTACAGAGCGTTGCGGAGGTCAGCCCACTTTTACCCAATGGGCTGCTGCTGCCGGAGTT
GACCAGATGACCCTAAGGAAGCGTTTGAACTATGGCATTCTTTGTAAAGATAAAATGATT
AAGAGCAACGTGAGGCTCGTTATTTCTATTGCCAAAAATTATCAAGGAGTAGGGATGAAT
CTTCAAGATTTGGTTCAGGAAGGATGTCGGGGCCTTGTTAGAGGAGCTGAAAAATTTGAT
GCCACCAAGGGTTTTAAGTTCTCAACTTATGCTCACTGGTGGATTAAGCAGGCTGTTAGG
AAATCTCTCTCTGATCAGTCCAGGATGATTCGGTTGCCATTTCACATGGTCGAGGCTACT
TATAGAGTAAAGGAAGCAAGAAAGCAATTGTTGACTGAAAATGGTAGACATCCTAACGAT
GCAGAAGTAGCTGAAGCAGCAGGGTTGTCAATGAAGAGACTTGCTGCTGTGATGTTAACT
CCTAAAGCTCCAAGATCACTTGACCAGAAAATTGGGTTCAATGAAAGTCTCAAACCTTCG
GAAGTGCTTGCAGACCCTGAAGCGGAAACATCAGAAGAAATACTGACCAAGCAGTTCATG
AGACAGGACCTGGAGAAGGTATTAGACACCTTAAATCCAAGGGAGAAGCAGGTCGTTAGA
TGGCGGTTTGGACTAGAGGATGGCAGGATGAAGACATTACAAGAGATTGGTGAGTTAATG
GGCGTTAGCCGGGAGAGAATTCGCCAAATAGAGTCTTGTGCATTCCGTAAGTTGAAGAAC
AAGAAAAGAACAAAGTTTTTGCAGCAATATATAAATGCTTAA