Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079864
CDS Infomation

pacid=37431370 polypeptide=PGSC0003DMP400054176 locus=PGSC0003DMG400031103 ID=PGSC0003DMT400079864.v4.03 annot-version=v4.03
Sequence

ATGGCAAGTTATAGTAACTCTGCAATCCAACAGCATTTGTTTTTTGTGCTGTTGATTCTT
CTTTTCTTTACTGGTTTTGCTGAATCTTTAAATGAAGAGGGACTTATTCTTTTGGAGTTC
AAAGAATCCCTTAATGATCCTGATAACAATCTTGAAAGTTGGAATTCTTCAAACTTGAAT
CCTTGCAAATGGGATGGTGTTAAGTGTAGCAAAAATGATCAGGTGATTTCTCTCAATATC
GATAATCGTAACTTGTCTGGTAGTTTTTCTTCAAGAATTTGTGAACTTCCTTACTTGACA
GTATTGAATGTGTCATCAAATTTCATTTCTGGTCAAATTCCTGATGATTTTGCGTCGTGT
CATAGTTTGGAGAAATTGAACCTTTGTACCAATAGGTTCCATGGAGAGTTTCCTCTCCAA
TTATGCAATATTACCTCACTTAGACAGCTTTACTTATGTGAGAATTACATTTCTGGTGAA
ATCCCTCAGGATATCGGAAACTTGTCACTTCTTGAGGAGCTTGTTGTTTATAGTAACAAT
CTTACTGGAAGAATACCTGTTTCAATAGGTAAATTGAAAAAACTTAGGATCATCAGGGCT
GGGCGAAACTATCTGTCTGGCCCTATTCCTGCTGAAGTTAGTGAATGTGATAGTTTACAA
GTGCTTGGTGTAGCGGAAAATAGGCTAGAAGGGTCTTTTCCAGTAGAGCTACAAAGGCTT
AAGAACCTCATCAACTTAATTCTTTGGGCTAACTCATTCTCTGGTGCAATTCCTCCTGAG
GTTGGGAACTTCAGTAAGTTGGAATTACTCGCGTTGCATGAGAATTCATTCAGTGGACAA
ATTCCTAAAGAGATTGGGAAGTTAACTAATTTGAGAAGGTTGTACATTTACACTAATCAG
TTGAATGGAACAATTCCATGGCAAATGGGGAATTGTTTGAGTGCAGTTGAGATTGATTTA
TCCGAAAATCAGTTGAGAGGAAGCATTCCGAAAAGTTTGGGGCAACTTTCTAATCTGCGG
TTGCTTCACCTTTTCGAGAACAGATTACATGGGAAGATTCCAAAGGAGCTTGGAGAGTTG
AAGCTGCTTAAGAATTTTGACTTGTCTATAAACAATTTGACAGGTAGAATTCCAGCAGTG
TTTCAGCATCTTGCATTCTTGGAGAATTTACAACTTTTTGACAATCACCTTGAAGGTCCT
ATTCCGCGATTTATTGGCCTCAAAAGCAACCTCACTGTAGTGGACCTGTCCAAGAATAAT
CTTAAAGGAAGAATACCTTCAAATCTTTGTCAGTTTCAGAAGTTAACATTCCTGAGCCTC
GGGTCTAACAAGTTGTCTGGCAATATCCCTTATGGCCTAAAGACTTGCAAGTCCCTCGAG
CAGCTAATGCTAGGAGATAACCTGCTCACTGGGAGTTTTTCTTTTGATCTTAGCAAGCTG
GAGAACCTTTCAGCTCTTGAGCTTTTTCACAATAGATTTTCTGGATTGCTACCACCAGAG
GTGGGCAACCTTAGAAGATTAGAGAGGTTGCTCTTGTCAAATAACAACTTTTTTGGGCAA
ATTCCTCCTGATATTGGAAAACTTGTGAAGCTTGTTGCTTTTAATGTTTCCTCCAACCGG
CTCTCGGGTGATATTCCTCATGAATTAGGGAATTGTTTAAGTCTCCAAAGGCTTGATCTT
AGCAAGAACTCGTTCGCTGGAAATCTCCCCGATGAACTTGGTAGGCTAGTCAACTTGGAA
CTGCTTAAGCTATCTGATAATAAGTTTAATGGACAGATACCTGGTGGCTTAGGTGGACTA
GCACGACTAACGGATTTGGAAATGGGAGGCAATTTCTTCTCTGGTAGTATTCCTATTGAG
CTTGGCTACCTTGGAACTCTTCAGATTTCTCTGAATCTGAGTCACAATGCTCTCAATGGA
TCGATTCCTAGCGCCCTCGGGAACTTGCAGATGCTTGAAACATTGTACTTAAATGACAAC
CAGCTTATTGGTGAGATTCCAACTTCAATAGGGCAGTTGATGAGTCTGATAGTATGCAAT
CTTTCTAACAATAACCTTGTGGGATCAGTACCAAACACGCCTGCCTTTAAGAGGATGGAC
TCGAGCAACTTTGCTGGAAATGTTGGGTTATGCACGTCCGATTCCATCCACTGTGATCCT
CCTCCGGCCCCTTGGATTGCTCCAAAGTCAAACTGGTTGAAACACGGTTCTTCTAGGCAA
AAAATAATTACTGCTGTTTCTGCGACTGTTGGGATGATCTCTTTGGTATTGATTTTAGTT
ATATGTAGGATCATTAGAGGCCACAAAGCAGCTTTTGTGTCCGTGGAAAATCAAGTAAAG
CCGGATGACTTGAATGATCATTACTTTCCACGAAAAGGGTTCACGTATCAGGACCTTGTC
GATGCTACTGGAAATTTCTCAGACAGCGCGATCATAGGAAGGGGAGCTTGTGGCACTGTC
TACAGAGCTCATATGGCTGATGGTGAGTTTGTTGCAGTTAAAAAGCTGAAGCCACAAGGA
GAAACCGCGAGTGTTGACAGCAGCTTCCAAGCTGAATTATCTACACTTGGTAAGATAAAT
CATAGAAATATTGTCAAGCTATATGGTTTCTGCTACCATCAAGATTGCAATCTTCTCTTG
TATGAGTACATGGGAAACGGAAGCCTCGGGGAAGTACTTCATGGGAATAAGACAACTAGT
TTACTAAATTGGAATAGCAGGTACAAAATTGCCTTAGGAGCTGCTGAGGGACTATGCTAT
TTGCACCATGACTGTAAGCCACATATCATTCACAGGGATATAAAATCGAACAACATTTTG
TTGGACGAAATGCTTGAGGCACATGTAGGAGACTTTGGCTTGGCAAAGCTAATTGACTTC
CCTTACTCAAAATCCATGTCCGCGGTTGCTGGTTCATACGGCTACATTGCCCCTGAATAT
GCATACACAATGAAAGTGACAGAGAAATGCGACATCTATAGTTATGGCGTTGTTTTGTTG
GAATTGATTACTGGTAGATCTCCAGTTCAACCCCTTGATCAGGGAGGCGATTTGGTGACT
TGGGTAAGGAGATCAATTCATGAAGGAGTGGCACTAACTGAGCTTTTTGACAAAAGACTG
GATGTTAGTGTTGCAAGAACAAGAGAGGAGATGTCTCTAGTTCTCAAGATTGCTATGTTC
TGCACCAATACATCCCCTGCCAATAGGCCTACAATGCGAGAAGTCATCGCCATGCTGATT
GAAGCCCGGGAATTTGTGTGCACTTCACCACCATCACCATCCTCCGAAACTCCTCTGAGT
GAAGCTGATGCTAATAAAGGTTCTAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400054176
PEP Infomation

pacid=37431370 transcript=PGSC0003DMT400079864 locus=PGSC0003DMG400031103 ID=PGSC0003DMT400079864.v4.03 annot-version=v4.03
Sequence

MASYSNSAIQQHLFFVLLILLFFTGFAESLNEEGLILLEFKESLNDPDNNLESWNSSNLN
PCKWDGVKCSKNDQVISLNIDNRNLSGSFSSRICELPYLTVLNVSSNFISGQIPDDFASC
HSLEKLNLCTNRFHGEFPLQLCNITSLRQLYLCENYISGEIPQDIGNLSLLEELVVYSNN
LTGRIPVSIGKLKKLRIIRAGRNYLSGPIPAEVSECDSLQVLGVAENRLEGSFPVELQRL
KNLINLILWANSFSGAIPPEVGNFSKLELLALHENSFSGQIPKEIGKLTNLRRLYIYTNQ
LNGTIPWQMGNCLSAVEIDLSENQLRGSIPKSLGQLSNLRLLHLFENRLHGKIPKELGEL
KLLKNFDLSINNLTGRIPAVFQHLAFLENLQLFDNHLEGPIPRFIGLKSNLTVVDLSKNN
LKGRIPSNLCQFQKLTFLSLGSNKLSGNIPYGLKTCKSLEQLMLGDNLLTGSFSFDLSKL
ENLSALELFHNRFSGLLPPEVGNLRRLERLLLSNNNFFGQIPPDIGKLVKLVAFNVSSNR
LSGDIPHELGNCLSLQRLDLSKNSFAGNLPDELGRLVNLELLKLSDNKFNGQIPGGLGGL
ARLTDLEMGGNFFSGSIPIELGYLGTLQISLNLSHNALNGSIPSALGNLQMLETLYLNDN
QLIGEIPTSIGQLMSLIVCNLSNNNLVGSVPNTPAFKRMDSSNFAGNVGLCTSDSIHCDP
PPAPWIAPKSNWLKHGSSRQKIITAVSATVGMISLVLILVICRIIRGHKAAFVSVENQVK
PDDLNDHYFPRKGFTYQDLVDATGNFSDSAIIGRGACGTVYRAHMADGEFVAVKKLKPQG
ETASVDSSFQAELSTLGKINHRNIVKLYGFCYHQDCNLLLYEYMGNGSLGEVLHGNKTTS
LLNWNSRYKIALGAAEGLCYLHHDCKPHIIHRDIKSNNILLDEMLEAHVGDFGLAKLIDF
PYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELITGRSPVQPLDQGGDLVT
WVRRSIHEGVALTELFDKRLDVSVARTREEMSLVLKIAMFCTNTSPANRPTMREVIAMLI
EAREFVCTSPPSPSSETPLSEADANKGSN*

Transcript Sequence

Transcript ID

PGSC0003DMT400079864
Transcript Infomation

pacid=37431370 locus=PGSC0003DMG400031103 ID=PGSC0003DMT400079864.v4.03 annot-version=v4.03
Sequence

ATGGCAAGTTATAGTAACTCTGCAATCCAACAGCATTTGTTTTTTGTGCTGTTGATTCTT
CTTTTCTTTACTGGTTTTGCTGAATCTTTAAATGAAGAGGGACTTATTCTTTTGGAGTTC
AAAGAATCCCTTAATGATCCTGATAACAATCTTGAAAGTTGGAATTCTTCAAACTTGAAT
CCTTGCAAATGGGATGGTGTTAAGTGTAGCAAAAATGATCAGGTGATTTCTCTCAATATC
GATAATCGTAACTTGTCTGGTAGTTTTTCTTCAAGAATTTGTGAACTTCCTTACTTGACA
GTATTGAATGTGTCATCAAATTTCATTTCTGGTCAAATTCCTGATGATTTTGCGTCGTGT
CATAGTTTGGAGAAATTGAACCTTTGTACCAATAGGTTCCATGGAGAGTTTCCTCTCCAA
TTATGCAATATTACCTCACTTAGACAGCTTTACTTATGTGAGAATTACATTTCTGGTGAA
ATCCCTCAGGATATCGGAAACTTGTCACTTCTTGAGGAGCTTGTTGTTTATAGTAACAAT
CTTACTGGAAGAATACCTGTTTCAATAGGTAAATTGAAAAAACTTAGGATCATCAGGGCT
GGGCGAAACTATCTGTCTGGCCCTATTCCTGCTGAAGTTAGTGAATGTGATAGTTTACAA
GTGCTTGGTGTAGCGGAAAATAGGCTAGAAGGGTCTTTTCCAGTAGAGCTACAAAGGCTT
AAGAACCTCATCAACTTAATTCTTTGGGCTAACTCATTCTCTGGTGCAATTCCTCCTGAG
GTTGGGAACTTCAGTAAGTTGGAATTACTCGCGTTGCATGAGAATTCATTCAGTGGACAA
ATTCCTAAAGAGATTGGGAAGTTAACTAATTTGAGAAGGTTGTACATTTACACTAATCAG
TTGAATGGAACAATTCCATGGCAAATGGGGAATTGTTTGAGTGCAGTTGAGATTGATTTA
TCCGAAAATCAGTTGAGAGGAAGCATTCCGAAAAGTTTGGGGCAACTTTCTAATCTGCGG
TTGCTTCACCTTTTCGAGAACAGATTACATGGGAAGATTCCAAAGGAGCTTGGAGAGTTG
AAGCTGCTTAAGAATTTTGACTTGTCTATAAACAATTTGACAGGTAGAATTCCAGCAGTG
TTTCAGCATCTTGCATTCTTGGAGAATTTACAACTTTTTGACAATCACCTTGAAGGTCCT
ATTCCGCGATTTATTGGCCTCAAAAGCAACCTCACTGTAGTGGACCTGTCCAAGAATAAT
CTTAAAGGAAGAATACCTTCAAATCTTTGTCAGTTTCAGAAGTTAACATTCCTGAGCCTC
GGGTCTAACAAGTTGTCTGGCAATATCCCTTATGGCCTAAAGACTTGCAAGTCCCTCGAG
CAGCTAATGCTAGGAGATAACCTGCTCACTGGGAGTTTTTCTTTTGATCTTAGCAAGCTG
GAGAACCTTTCAGCTCTTGAGCTTTTTCACAATAGATTTTCTGGATTGCTACCACCAGAG
GTGGGCAACCTTAGAAGATTAGAGAGGTTGCTCTTGTCAAATAACAACTTTTTTGGGCAA
ATTCCTCCTGATATTGGAAAACTTGTGAAGCTTGTTGCTTTTAATGTTTCCTCCAACCGG
CTCTCGGGTGATATTCCTCATGAATTAGGGAATTGTTTAAGTCTCCAAAGGCTTGATCTT
AGCAAGAACTCGTTCGCTGGAAATCTCCCCGATGAACTTGGTAGGCTAGTCAACTTGGAA
CTGCTTAAGCTATCTGATAATAAGTTTAATGGACAGATACCTGGTGGCTTAGGTGGACTA
GCACGACTAACGGATTTGGAAATGGGAGGCAATTTCTTCTCTGGTAGTATTCCTATTGAG
CTTGGCTACCTTGGAACTCTTCAGATTTCTCTGAATCTGAGTCACAATGCTCTCAATGGA
TCGATTCCTAGCGCCCTCGGGAACTTGCAGATGCTTGAAACATTGTACTTAAATGACAAC
CAGCTTATTGGTGAGATTCCAACTTCAATAGGGCAGTTGATGAGTCTGATAGTATGCAAT
CTTTCTAACAATAACCTTGTGGGATCAGTACCAAACACGCCTGCCTTTAAGAGGATGGAC
TCGAGCAACTTTGCTGGAAATGTTGGGTTATGCACGTCCGATTCCATCCACTGTGATCCT
CCTCCGGCCCCTTGGATTGCTCCAAAGTCAAACTGGTTGAAACACGGTTCTTCTAGGCAA
AAAATAATTACTGCTGTTTCTGCGACTGTTGGGATGATCTCTTTGGTATTGATTTTAGTT
ATATGTAGGATCATTAGAGGCCACAAAGCAGCTTTTGTGTCCGTGGAAAATCAAGTAAAG
CCGGATGACTTGAATGATCATTACTTTCCACGAAAAGGGTTCACGTATCAGGACCTTGTC
GATGCTACTGGAAATTTCTCAGACAGCGCGATCATAGGAAGGGGAGCTTGTGGCACTGTC
TACAGAGCTCATATGGCTGATGGTGAGTTTGTTGCAGTTAAAAAGCTGAAGCCACAAGGA
GAAACCGCGAGTGTTGACAGCAGCTTCCAAGCTGAATTATCTACACTTGGTAAGATAAAT
CATAGAAATATTGTCAAGCTATATGGTTTCTGCTACCATCAAGATTGCAATCTTCTCTTG
TATGAGTACATGGGAAACGGAAGCCTCGGGGAAGTACTTCATGGGAATAAGACAACTAGT
TTACTAAATTGGAATAGCAGGTACAAAATTGCCTTAGGAGCTGCTGAGGGACTATGCTAT
TTGCACCATGACTGTAAGCCACATATCATTCACAGGGATATAAAATCGAACAACATTTTG
TTGGACGAAATGCTTGAGGCACATGTAGGAGACTTTGGCTTGGCAAAGCTAATTGACTTC
CCTTACTCAAAATCCATGTCCGCGGTTGCTGGTTCATACGGCTACATTGCCCCTGAATAT
GCATACACAATGAAAGTGACAGAGAAATGCGACATCTATAGTTATGGCGTTGTTTTGTTG
GAATTGATTACTGGTAGATCTCCAGTTCAACCCCTTGATCAGGGAGGCGATTTGGTGACT
TGGGTAAGGAGATCAATTCATGAAGGAGTGGCACTAACTGAGCTTTTTGACAAAAGACTG
GATGTTAGTGTTGCAAGAACAAGAGAGGAGATGTCTCTAGTTCTCAAGATTGCTATGTTC
TGCACCAATACATCCCCTGCCAATAGGCCTACAATGCGAGAAGTCATCGCCATGCTGATT
GAAGCCCGGGAATTTGTGTGCACTTCACCACCATCACCATCCTCCGAAACTCCTCTGAGT
GAAGCTGATGCTAATAAAGGTTCTAATTAA