Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079838
CDS Infomation

pacid=37431496 polypeptide=PGSC0003DMP400054153 locus=PGSC0003DMG400031090 ID=PGSC0003DMT400079838.v4.03 annot-version=v4.03
Sequence

ATGGAAGAATTAGATGCCCTTTATCCACCAGATTCTGATCTTGATCTCAGCTTTACGAGC
TGTGCTTCCATTACCACTACAACAACTGATCGTACACTCAGTGCGAGAAGCAGTTTGGCT
CGTAGTAGTCTTACACTGAGCTTCAACGATCGTCTTTCATGTACGTCATCTACAAACAAT
CCATCTGCAGAAATCCCCAATTTTCACCGCCGTGCACACCGCCAGCATGACCCGAATTGG
TCCGCTATTAAGGCGGTGACCACCCTTTCCTCCGACGGTGCTCTTCATCTCCGCCACCTT
AAACTCCACCGCCTTGTTGGGTCTGGAAATCTCGGCCGAGTTTTCCTCTGCCGTCTCAGG
GATTATGACCATGCTAATTTTGCCCTTAAAGTTATCGATCGGGATTCGCTTACGGCGAAG
AAGCTTTCTCATGTTCAAACAGAAGCGGAGATTCTCTCCTCTTTAGATCACCCTTTTCTA
CCTACGCTTTACGCACATTTAGAAGTTTCACATTATACTTGCTTGTTAATCGATTTCTGC
CCTAATGGTGATCTCCATTCCTTGCTCCGAAAGCAACCTCGTAATCGGCTACCGGTTGAA
TCAGTCAGATTCTACGCAGCTGAGGTACTCATAGCTCTCGAGTATTTACATTCTCTCGGA
ATAGTTTACCGTGATTTGAAACCTGAAAACATACTTATTCGTGAAGATGGTCACATTATG
CTTTCCGATTTCGATTTATGTTTCAAATCCGAAGTTTCCCCAAAATTAGATTTCACTACC
CGTATTCGAGAAGGATCTAGAAGAAGAAACAGTTGTTACGGTGACCGGCAACGGGAAGAA
ACAGTGACCGAGTTCGTCTCAGAGCCAACATCTGCATTTTCCAGATCATGCGTTGGGACT
CATGAATACTTAGCGCCGGAGCTCATCAGCGGCGCCGGCCACGGCAATGGTGTAGACTGG
TGGGCGTTTGGGGTGTTACTATACGAGTTGTTGTACGGTACGACGCCGTTTAAAGGAAAC
AGTAAAGAGTCCACCCTGCGCAATATAGCATCAAGCAAAGGAGTGAAGTTTTACGTAGAT
GAAACTCAAGGACATGAAGCTGAATTGAGAGATTTAATAGAGAAATTGTTAATTAAGGAT
CCAAGGAGGAGGCTAGGATGCACCAGGGGTGCAACAGATATTAAACGTCACCCATTCTTC
GCCGGAATAAAATGGCCGTTGATCAGAACTTACCGGCCACCGGAAGTTCGGGGATTAACG
ATAAAAAAGACGAAGAGTAAGGCGCACGTGAGTCACGTGACTGGATTATCATCACCAAGA
ATAAGAAGGCGTTGTTTATGGAAAAAATTGGGTTATCTAATGAGGATCAAGGGATCTAAG
TACAATTTAAACTCTAATCATAATTATTATTGTCATACTAATCACAAGGTTAGAAAATGT
GCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400054153
PEP Infomation

pacid=37431496 transcript=PGSC0003DMT400079838 locus=PGSC0003DMG400031090 ID=PGSC0003DMT400079838.v4.03 annot-version=v4.03
Sequence

MEELDALYPPDSDLDLSFTSCASITTTTTDRTLSARSSLARSSLTLSFNDRLSCTSSTNN
PSAEIPNFHRRAHRQHDPNWSAIKAVTTLSSDGALHLRHLKLHRLVGSGNLGRVFLCRLR
DYDHANFALKVIDRDSLTAKKLSHVQTEAEILSSLDHPFLPTLYAHLEVSHYTCLLIDFC
PNGDLHSLLRKQPRNRLPVESVRFYAAEVLIALEYLHSLGIVYRDLKPENILIREDGHIM
LSDFDLCFKSEVSPKLDFTTRIREGSRRRNSCYGDRQREETVTEFVSEPTSAFSRSCVGT
HEYLAPELISGAGHGNGVDWWAFGVLLYELLYGTTPFKGNSKESTLRNIASSKGVKFYVD
ETQGHEAELRDLIEKLLIKDPRRRLGCTRGATDIKRHPFFAGIKWPLIRTYRPPEVRGLT
IKKTKSKAHVSHVTGLSSPRIRRRCLWKKLGYLMRIKGSKYNLNSNHNYYCHTNHKVRKC
A*

Transcript Sequence

Transcript ID

PGSC0003DMT400079838
Transcript Infomation

pacid=37431496 locus=PGSC0003DMG400031090 ID=PGSC0003DMT400079838.v4.03 annot-version=v4.03
Sequence

ATGGAAGAATTAGATGCCCTTTATCCACCAGATTCTGATCTTGATCTCAGCTTTACGAGC
TGTGCTTCCATTACCACTACAACAACTGATCGTACACTCAGTGCGAGAAGCAGTTTGGCT
CGTAGTAGTCTTACACTGAGCTTCAACGATCGTCTTTCATGTACGTCATCTACAAACAAT
CCATCTGCAGAAATCCCCAATTTTCACCGCCGTGCACACCGCCAGCATGACCCGAATTGG
TCCGCTATTAAGGCGGTGACCACCCTTTCCTCCGACGGTGCTCTTCATCTCCGCCACCTT
AAACTCCACCGCCTTGTTGGGTCTGGAAATCTCGGCCGAGTTTTCCTCTGCCGTCTCAGG
GATTATGACCATGCTAATTTTGCCCTTAAAGTTATCGATCGGGATTCGCTTACGGCGAAG
AAGCTTTCTCATGTTCAAACAGAAGCGGAGATTCTCTCCTCTTTAGATCACCCTTTTCTA
CCTACGCTTTACGCACATTTAGAAGTTTCACATTATACTTGCTTGTTAATCGATTTCTGC
CCTAATGGTGATCTCCATTCCTTGCTCCGAAAGCAACCTCGTAATCGGCTACCGGTTGAA
TCAGTCAGATTCTACGCAGCTGAGGTACTCATAGCTCTCGAGTATTTACATTCTCTCGGA
ATAGTTTACCGTGATTTGAAACCTGAAAACATACTTATTCGTGAAGATGGTCACATTATG
CTTTCCGATTTCGATTTATGTTTCAAATCCGAAGTTTCCCCAAAATTAGATTTCACTACC
CGTATTCGAGAAGGATCTAGAAGAAGAAACAGTTGTTACGGTGACCGGCAACGGGAAGAA
ACAGTGACCGAGTTCGTCTCAGAGCCAACATCTGCATTTTCCAGATCATGCGTTGGGACT
CATGAATACTTAGCGCCGGAGCTCATCAGCGGCGCCGGCCACGGCAATGGTGTAGACTGG
TGGGCGTTTGGGGTGTTACTATACGAGTTGTTGTACGGTACGACGCCGTTTAAAGGAAAC
AGTAAAGAGTCCACCCTGCGCAATATAGCATCAAGCAAAGGAGTGAAGTTTTACGTAGAT
GAAACTCAAGGACATGAAGCTGAATTGAGAGATTTAATAGAGAAATTGTTAATTAAGGAT
CCAAGGAGGAGGCTAGGATGCACCAGGGGTGCAACAGATATTAAACGTCACCCATTCTTC
GCCGGAATAAAATGGCCGTTGATCAGAACTTACCGGCCACCGGAAGTTCGGGGATTAACG
ATAAAAAAGACGAAGAGTAAGGCGCACGTGAGTCACGTGACTGGATTATCATCACCAAGA
ATAAGAAGGCGTTGTTTATGGAAAAAATTGGGTTATCTAATGAGGATCAAGGGATCTAAG
TACAATTTAAACTCTAATCATAATTATTATTGTCATACTAATCACAAGGTTAGAAAATGT
GCTTAA