Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079836
CDS Infomation

pacid=37432847 polypeptide=PGSC0003DMP400054152 locus=PGSC0003DMG401031089 ID=PGSC0003DMT400079836.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCGACGAAGGAGCCAATTTAGGTTCATCTCCCTTGAAATTTGGGACACCGGAG
GCGTTGGAAGAGGTGCGGAATCTCACTGACGTTGGAGACATGACTAGACTTCTCCACGAG
TGCATTGCATATCAACGAGCCCTAGATCTAGAACTGGATACTATCCTTTCACATCGATCT
GACCTTGACAAGCAGCTTTCTGGCCTCCAAAAATCCGCTCAAGTTCTCGACATTGTTAAA
GCAGACGCAGATCACCTATTCTCCAACATCAGTTCAACTTCTCTCCTTGCTGATCAGGTA
AGCGCCAAAGTCCGTCAGCTCGATCTAGGTCAATCGCGTGTTAACGACACTCTCCTTCGT
ATAGACGCTATCGTTGATCGCTCTAATTGTTTAGACGGTGTACGTAAGGCACTCGCATCT
GAGGACTTTGAATCTGCTGCTAATTATGTTCAGACGTTCCTTCAACTTGATGCTAAGTAC
AAGGATTCAGCTGCTTCTGACCAGAGAGACCAGCTCCTCGCCTCTAAGAAGCAGCTTGAA
GGGATTGTCCGGCGTAAATTGGCAGATGCAGTTGATCAGCGTGATCATTCCACTGTTCTG
CGGTTCATAAGGCTGTATCCCCCGTTGGCATTGGAGGAGGAGGGACTGCAAGTGTACGTG
GCGTATTTGAAGAAGGTAATTGCCATGAGATCGCGCCTTGAGTATGAGCAGTTGGTCGAA
ATGATGAGTGATCAGCAGGGATCCAGCCAGAACCAGCTTAATTTTGTATCCTGTTTGACT
AATTTATTCAAAGATATCGTCTTGGCTATTGAAGAGAATGATGAAACTTTAAGGAGCTTG
TGTGGAGAGGATGGCATTGTTTATGCAATATGTGAACTTCAAGAAGAGTGTGACTCTCGC
GGTTCCACTATTATAAAGAAGTACATGGAGTACAGGAAACTAGCGAAAGTGACTTCTGAG
ATTAATTCGTACAAGAGCGATTTGCTGTCTGTTGGAATTGAAGGACCAGACCCCAGAGAT
ATCGAAGTATATTTGGAGGAGATCTTGTCTTTGACACAATTGGGTGAGGATTACACGGGG
TATATGATATCAAAGATTAGGGGTTTGAGTTCTGTTGATCCCGAACTAGGTCCCCGTGCC
ACAAAGGCTTTTAGGAGTGGTAATTTCAGTAAAGTTGTGCAAGATATTACCGGTTATTAT
GTGATCTTGGAAGGATACTTCATGGTTGAGAATGTGAGAAAAGCTATAAAAATTGATGAA
CTCGTGTTCGATAGTCTCACAACTTCCATGGTGGACGATGTCTTCTATGTTCTGCAGAGC
TGTTGTCGAAGGTCCATATCCACTTCAAATATCAACTCTGTTATTGCAGTTTTAAGCAGT
GCTGTAAGTCTATTAGGTGGTGAGTTCAATGAGGCTTTGCAGCAGAAGGTCAGAGAGCCT
AATCTTGGAGCAAAGCTGTTCACCGGTGGTGTTGCTGTACAAAAGACTGGTACAGAGATT
GCCACGGCTTTGAATAATATGGATGTGAGTGGTGAGTATGCATTGAAATTACGGCATGAG
ATTGAAGAACAATGTGCTGAGGTGTTTTCTGCACCAGCGGATAGAGAGAGGGTCAAATCA
TGTTTATCTGAATTAAATGAGACAAGCAATGGTTTCAAGAAGGCCTTGAATATTGGCTTG
GAACAACTAGTGGCTACTGTGACACCTCGAATTCGGCCAGTGTTGGATACTGTTGCAACA
ATCAGCTATGAGCTGTCTGAATCTGAATATGCTGACAATGAGGTAAATGACCCGTGGGTT
CAAAGGCTTCTCCATGCTGTAGAGACCAATGTGGCTTGGCTTCAACCATTGATGACTGCT
AACAATTATGACTCTCTTGTACATCTGGTCATTGACTTTGTTGTTAAGAGGCTTGAGGTT
ATCATGATGCAAAAGAGATTCAGTCAACTTGGAGGTCTTCAACTTGACAGAGATATTCGA
GCTCTTGTGAGCTACTTCTCCAACATGACCCAGAGGACTGTTAGGGACAAGTTTGCTCGT
CTAACCCAAATGGCTACAATATTAAACTTGGAGAAGGTCTCTGAGATTCTGGATTTCTGG
GGTGAAAACTCAGGACCCATGACCTGGCGACTTACTCCAGCTGAGGTTAGAAGAGTGTTG
AGTTTGAGGGTTGACTTTAAATCTGAAGCAATATCGGCTCTTAAGTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400054152
PEP Infomation

pacid=37432847 transcript=PGSC0003DMT400079836 locus=PGSC0003DMG401031089 ID=PGSC0003DMT400079836.v4.03 annot-version=v4.03
Sequence

MASDEGANLGSSPLKFGTPEALEEVRNLTDVGDMTRLLHECIAYQRALDLELDTILSHRS
DLDKQLSGLQKSAQVLDIVKADADHLFSNISSTSLLADQVSAKVRQLDLGQSRVNDTLLR
IDAIVDRSNCLDGVRKALASEDFESAANYVQTFLQLDAKYKDSAASDQRDQLLASKKQLE
GIVRRKLADAVDQRDHSTVLRFIRLYPPLALEEEGLQVYVAYLKKVIAMRSRLEYEQLVE
MMSDQQGSSQNQLNFVSCLTNLFKDIVLAIEENDETLRSLCGEDGIVYAICELQEECDSR
GSTIIKKYMEYRKLAKVTSEINSYKSDLLSVGIEGPDPRDIEVYLEEILSLTQLGEDYTG
YMISKIRGLSSVDPELGPRATKAFRSGNFSKVVQDITGYYVILEGYFMVENVRKAIKIDE
LVFDSLTTSMVDDVFYVLQSCCRRSISTSNINSVIAVLSSAVSLLGGEFNEALQQKVREP
NLGAKLFTGGVAVQKTGTEIATALNNMDVSGEYALKLRHEIEEQCAEVFSAPADRERVKS
CLSELNETSNGFKKALNIGLEQLVATVTPRIRPVLDTVATISYELSESEYADNEVNDPWV
QRLLHAVETNVAWLQPLMTANNYDSLVHLVIDFVVKRLEVIMMQKRFSQLGGLQLDRDIR
ALVSYFSNMTQRTVRDKFARLTQMATILNLEKVSEILDFWGENSGPMTWRLTPAEVRRVL
SLRVDFKSEAISALKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400079836
Transcript Infomation

pacid=37432847 locus=PGSC0003DMG401031089 ID=PGSC0003DMT400079836.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCGACGAAGGAGCCAATTTAGGTTCATCTCCCTTGAAATTTGGGACACCGGAG
GCGTTGGAAGAGGTGCGGAATCTCACTGACGTTGGAGACATGACTAGACTTCTCCACGAG
TGCATTGCATATCAACGAGCCCTAGATCTAGAACTGGATACTATCCTTTCACATCGATCT
GACCTTGACAAGCAGCTTTCTGGCCTCCAAAAATCCGCTCAAGTTCTCGACATTGTTAAA
GCAGACGCAGATCACCTATTCTCCAACATCAGTTCAACTTCTCTCCTTGCTGATCAGGTA
AGCGCCAAAGTCCGTCAGCTCGATCTAGGTCAATCGCGTGTTAACGACACTCTCCTTCGT
ATAGACGCTATCGTTGATCGCTCTAATTGTTTAGACGGTGTACGTAAGGCACTCGCATCT
GAGGACTTTGAATCTGCTGCTAATTATGTTCAGACGTTCCTTCAACTTGATGCTAAGTAC
AAGGATTCAGCTGCTTCTGACCAGAGAGACCAGCTCCTCGCCTCTAAGAAGCAGCTTGAA
GGGATTGTCCGGCGTAAATTGGCAGATGCAGTTGATCAGCGTGATCATTCCACTGTTCTG
CGGTTCATAAGGCTGTATCCCCCGTTGGCATTGGAGGAGGAGGGACTGCAAGTGTACGTG
GCGTATTTGAAGAAGGTAATTGCCATGAGATCGCGCCTTGAGTATGAGCAGTTGGTCGAA
ATGATGAGTGATCAGCAGGGATCCAGCCAGAACCAGCTTAATTTTGTATCCTGTTTGACT
AATTTATTCAAAGATATCGTCTTGGCTATTGAAGAGAATGATGAAACTTTAAGGAGCTTG
TGTGGAGAGGATGGCATTGTTTATGCAATATGTGAACTTCAAGAAGAGTGTGACTCTCGC
GGTTCCACTATTATAAAGAAGTACATGGAGTACAGGAAACTAGCGAAAGTGACTTCTGAG
ATTAATTCGTACAAGAGCGATTTGCTGTCTGTTGGAATTGAAGGACCAGACCCCAGAGAT
ATCGAAGTATATTTGGAGGAGATCTTGTCTTTGACACAATTGGGTGAGGATTACACGGGG
TATATGATATCAAAGATTAGGGGTTTGAGTTCTGTTGATCCCGAACTAGGTCCCCGTGCC
ACAAAGGCTTTTAGGAGTGGTAATTTCAGTAAAGTTGTGCAAGATATTACCGGTTATTAT
GTGATCTTGGAAGGATACTTCATGGTTGAGAATGTGAGAAAAGCTATAAAAATTGATGAA
CTCGTGTTCGATAGTCTCACAACTTCCATGGTGGACGATGTCTTCTATGTTCTGCAGAGC
TGTTGTCGAAGGTCCATATCCACTTCAAATATCAACTCTGTTATTGCAGTTTTAAGCAGT
GCTGTAAGTCTATTAGGTGGTGAGTTCAATGAGGCTTTGCAGCAGAAGGTCAGAGAGCCT
AATCTTGGAGCAAAGCTGTTCACCGGTGGTGTTGCTGTACAAAAGACTGGTACAGAGATT
GCCACGGCTTTGAATAATATGGATGTGAGTGGTGAGTATGCATTGAAATTACGGCATGAG
ATTGAAGAACAATGTGCTGAGGTGTTTTCTGCACCAGCGGATAGAGAGAGGGTCAAATCA
TGTTTATCTGAATTAAATGAGACAAGCAATGGTTTCAAGAAGGCCTTGAATATTGGCTTG
GAACAACTAGTGGCTACTGTGACACCTCGAATTCGGCCAGTGTTGGATACTGTTGCAACA
ATCAGCTATGAGCTGTCTGAATCTGAATATGCTGACAATGAGGTAAATGACCCGTGGGTT
CAAAGGCTTCTCCATGCTGTAGAGACCAATGTGGCTTGGCTTCAACCATTGATGACTGCT
AACAATTATGACTCTCTTGTACATCTGGTCATTGACTTTGTTGTTAAGAGGCTTGAGGTT
ATCATGATGCAAAAGAGATTCAGTCAACTTGGAGGTCTTCAACTTGACAGAGATATTCGA
GCTCTTGTGAGCTACTTCTCCAACATGACCCAGAGGACTGTTAGGGACAAGTTTGCTCGT
CTAACCCAAATGGCTACAATATTAAACTTGGAGAAGGTCTCTGAGATTCTGGATTTCTGG
GGTGAAAACTCAGGACCCATGACCTGGCGACTTACTCCAGCTGAGGTTAGAAGAGTGTTG
AGTTTGAGGGTTGACTTTAAATCTGAAGCAATATCGGCTCTTAAGTTGTAA