Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079820
CDS Infomation

pacid=37466138 polypeptide=PGSC0003DMP400054139 locus=PGSC0003DMG400031081 ID=PGSC0003DMT400079820.v4.03 annot-version=v4.03
Sequence

ATGAGTGCTTTGTATTCCACTTTTATCTTGATTGATCTTCAAAGTTCTTGGTATTCAGCT
AAACAGATACCCAATTCCACTTTTTGTTATTTAAACCAGTCTCAATTTCCTTCTTCCACG
TTCTCAGCGGCATTTCGTCGAACACGTGGTGGGCGGGGTAGATTTCCGGCGGTTTCAGCG
TCGATTCAGTCACCGGGAATCAGGAGACCGAGGGAACGTTCCGGTGCCGGAAATGGGTTG
TCGTTGTTTTCTCCTAATTCGCCTTCCACTTCGTGTTCCGGGGATGAGGTTGTGTCGGAT
TTGGACTTGTTCTTGGAGTTAGTGCCACTGAGGATGAGGAATGAGCTATTTATGCATCAG
GAGATTGGGAAGTTGGTTGAGGTAGTTATGGATTTAGGTAGAAAGCCCCTCGCGCGATTT
CCTTCAGGTGATTGGATCATTTCGGAGCAGCCTGTAATGCTTGAGGATCTTCACCATGCC
ATTTCAAAGGTGGGGGATTTCTCAGATGACAACCGTTCTGGTATTGACAGTTCCCTACAT
CGTATTAGTGCAATTAGAAACCGTAAAATGCAAATTATTGGCCTTACCTGCCGGGTTGGT
CGAGCTGTATCTGGAAGTGCTGAGATCATACGTGACTTGATTGAAGGAGGTGGCTCCATA
TTGGTGATAGGTCCTCCAGGGGTTGGTAAAACTACCTTAATCAGAGAAATAGCCAGGATG
CTGGCAGATGGCCAGAAGAAACGAGTCGTTATTGTTGATACATCTAATGAGATCGGAGGC
GATGGAGATGTTCCTCATTCAGGTATTGGCTGTGCAAGAAGGATGCAAGTCCCAAATGTT
AACCTGCAGCATAATGTAATGATCGAAGCAGTTGAAAACCATATGCCCCAAACCATCATC
ATAGATGAAATAGGTACAGAGCTTGAAGCATTGGCTGCTAGTACAATTGCTCAGAGAGGA
GTACAGCTTGTTGGAACTGCTCATGGAAGTACTATTGAGAGTATAGTAAAAAATCCATCC
TTACAGATGCTTGTTGGTGGCATAGAGAGTGTTACTCTTGGTGATGAGGAAGCAAGGAAA
AGGAAAGTACAGAAAACAATTCTCGAGAGGAAAGGTCCTCCAACCTTCACATGTGCTGTT
GAGATGATATCAAGAACTCAATGCCGTGTTCACCATAGACTAGATTTGACAGTAGATGCT
TTATTAGCAGGAAAATCTCCTTTGTTTGAGATACGGGGATTGGAGAGTGAAGCCGAAAAT
TTGATCGAGTCTTCTCCATTCACTCTAGAGGACGATGTTAATGACTTTGAGCTAATTGAT
AAAGTGGAAAAGAAAGACAAAATGGAGTCTGATAGGGAATATGTAAAAAAGAAACCTAAA
GTGGAGTCTGATATGGAGTATGTAAAAAAGAAAGATAAAGTGGAGTTTGATATGGAGTAT
GTAAAAAAGAAAGTTAAAGTAGAGTCTGATAGGGAGTATGTAAAAAAGAAAGATAAAGAA
GAGTATGTAAGTTATAGCATGCAATCCAGTAACGAAGACAAAAAGATAAAATTTGAGTCA
GACGAGGAAGACGATGATCATCCCAATTCCAAGAAATCGGGCACCAGTGGATATGCCAGC
AAAAGGACCTCTCCTGTGTATGTTTATACTTATAAGATTCAAGAAGCTGATCTATTGCAA
GTTGCAACTGTTATGGGGCTAGAGGAAGAAATTGAAGTAACAGATGATATTGGTATTGCA
GATGCTATTCTAGCATCTAGTGCTGAAATGAAGCAGAATCCTTGGATTCGTAGCGTTGCC
AAATTTCATCAAGTGCCTGTCTTTGTTGTAAAGTCAAATACCATGGCACAGATGGTGAAG
GCTATCCGTATGATTCTTGGAATGGATTCTATTCACTCAAAACAACCATTGAAAGATTCA
TCTGATATTGAAATTGAAGATGATGCACCGAAAAGGAGACCTACATTGGAGGAGATCGAT
GCCTTAGAGGAGGTCCGCCTTGCAATTGAGTACATCGTCATACCTGGTGGTGAGGCTGTT
GAACTTCTCCCAAGGCGCTCTGAGATAGTTGCCCAACAACTCAAGCTGGTTGAGAGTTAT
CAGTTGGCTGCAGAAAATTCAGGTACCGAATCAAACCCGAGACTGCAAATCCTTCCACAG
AAACTGTACAGGAAGACTTCTGTAAAGACCTTGAGATCCAGTTCAAGTCAGAACAGCACA
GGTTCCGACTCATGGATTGGTAAGAACGGAGGCACTGGTGTTGCTCGACTGCCTTTCTTG
CCTGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400054139
PEP Infomation

pacid=37466138 transcript=PGSC0003DMT400079820 locus=PGSC0003DMG400031081 ID=PGSC0003DMT400079820.v4.03 annot-version=v4.03
Sequence

MSALYSTFILIDLQSSWYSAKQIPNSTFCYLNQSQFPSSTFSAAFRRTRGGRGRFPAVSA
SIQSPGIRRPRERSGAGNGLSLFSPNSPSTSCSGDEVVSDLDLFLELVPLRMRNELFMHQ
EIGKLVEVVMDLGRKPLARFPSGDWIISEQPVMLEDLHHAISKVGDFSDDNRSGIDSSLH
RISAIRNRKMQIIGLTCRVGRAVSGSAEIIRDLIEGGGSILVIGPPGVGKTTLIREIARM
LADGQKKRVVIVDTSNEIGGDGDVPHSGIGCARRMQVPNVNLQHNVMIEAVENHMPQTII
IDEIGTELEALAASTIAQRGVQLVGTAHGSTIESIVKNPSLQMLVGGIESVTLGDEEARK
RKVQKTILERKGPPTFTCAVEMISRTQCRVHHRLDLTVDALLAGKSPLFEIRGLESEAEN
LIESSPFTLEDDVNDFELIDKVEKKDKMESDREYVKKKPKVESDMEYVKKKDKVEFDMEY
VKKKVKVESDREYVKKKDKEEYVSYSMQSSNEDKKIKFESDEEDDDHPNSKKSGTSGYAS
KRTSPVYVYTYKIQEADLLQVATVMGLEEEIEVTDDIGIADAILASSAEMKQNPWIRSVA
KFHQVPVFVVKSNTMAQMVKAIRMILGMDSIHSKQPLKDSSDIEIEDDAPKRRPTLEEID
ALEEVRLAIEYIVIPGGEAVELLPRRSEIVAQQLKLVESYQLAAENSGTESNPRLQILPQ
KLYRKTSVKTLRSSSSQNSTGSDSWIGKNGGTGVARLPFLPE*

Transcript Sequence

Transcript ID

PGSC0003DMT400079820
Transcript Infomation

pacid=37466138 locus=PGSC0003DMG400031081 ID=PGSC0003DMT400079820.v4.03 annot-version=v4.03
Sequence

ATGAGTGCTTTGTATTCCACTTTTATCTTGATTGATCTTCAAAGTTCTTGGTATTCAGCT
AAACAGATACCCAATTCCACTTTTTGTTATTTAAACCAGTCTCAATTTCCTTCTTCCACG
TTCTCAGCGGCATTTCGTCGAACACGTGGTGGGCGGGGTAGATTTCCGGCGGTTTCAGCG
TCGATTCAGTCACCGGGAATCAGGAGACCGAGGGAACGTTCCGGTGCCGGAAATGGGTTG
TCGTTGTTTTCTCCTAATTCGCCTTCCACTTCGTGTTCCGGGGATGAGGTTGTGTCGGAT
TTGGACTTGTTCTTGGAGTTAGTGCCACTGAGGATGAGGAATGAGCTATTTATGCATCAG
GAGATTGGGAAGTTGGTTGAGGTAGTTATGGATTTAGGTAGAAAGCCCCTCGCGCGATTT
CCTTCAGGTGATTGGATCATTTCGGAGCAGCCTGTAATGCTTGAGGATCTTCACCATGCC
ATTTCAAAGGTGGGGGATTTCTCAGATGACAACCGTTCTGGTATTGACAGTTCCCTACAT
CGTATTAGTGCAATTAGAAACCGTAAAATGCAAATTATTGGCCTTACCTGCCGGGTTGGT
CGAGCTGTATCTGGAAGTGCTGAGATCATACGTGACTTGATTGAAGGAGGTGGCTCCATA
TTGGTGATAGGTCCTCCAGGGGTTGGTAAAACTACCTTAATCAGAGAAATAGCCAGGATG
CTGGCAGATGGCCAGAAGAAACGAGTCGTTATTGTTGATACATCTAATGAGATCGGAGGC
GATGGAGATGTTCCTCATTCAGGTATTGGCTGTGCAAGAAGGATGCAAGTCCCAAATGTT
AACCTGCAGCATAATGTAATGATCGAAGCAGTTGAAAACCATATGCCCCAAACCATCATC
ATAGATGAAATAGGTACAGAGCTTGAAGCATTGGCTGCTAGTACAATTGCTCAGAGAGGA
GTACAGCTTGTTGGAACTGCTCATGGAAGTACTATTGAGAGTATAGTAAAAAATCCATCC
TTACAGATGCTTGTTGGTGGCATAGAGAGTGTTACTCTTGGTGATGAGGAAGCAAGGAAA
AGGAAAGTACAGAAAACAATTCTCGAGAGGAAAGGTCCTCCAACCTTCACATGTGCTGTT
GAGATGATATCAAGAACTCAATGCCGTGTTCACCATAGACTAGATTTGACAGTAGATGCT
TTATTAGCAGGAAAATCTCCTTTGTTTGAGATACGGGGATTGGAGAGTGAAGCCGAAAAT
TTGATCGAGTCTTCTCCATTCACTCTAGAGGACGATGTTAATGACTTTGAGCTAATTGAT
AAAGTGGAAAAGAAAGACAAAATGGAGTCTGATAGGGAATATGTAAAAAAGAAACCTAAA
GTGGAGTCTGATATGGAGTATGTAAAAAAGAAAGATAAAGTGGAGTTTGATATGGAGTAT
GTAAAAAAGAAAGTTAAAGTAGAGTCTGATAGGGAGTATGTAAAAAAGAAAGATAAAGAA
GAGTATGTAAGTTATAGCATGCAATCCAGTAACGAAGACAAAAAGATAAAATTTGAGTCA
GACGAGGAAGACGATGATCATCCCAATTCCAAGAAATCGGGCACCAGTGGATATGCCAGC
AAAAGGACCTCTCCTGTGTATGTTTATACTTATAAGATTCAAGAAGCTGATCTATTGCAA
GTTGCAACTGTTATGGGGCTAGAGGAAGAAATTGAAGTAACAGATGATATTGGTATTGCA
GATGCTATTCTAGCATCTAGTGCTGAAATGAAGCAGAATCCTTGGATTCGTAGCGTTGCC
AAATTTCATCAAGTGCCTGTCTTTGTTGTAAAGTCAAATACCATGGCACAGATGGTGAAG
GCTATCCGTATGATTCTTGGAATGGATTCTATTCACTCAAAACAACCATTGAAAGATTCA
TCTGATATTGAAATTGAAGATGATGCACCGAAAAGGAGACCTACATTGGAGGAGATCGAT
GCCTTAGAGGAGGTCCGCCTTGCAATTGAGTACATCGTCATACCTGGTGGTGAGGCTGTT
GAACTTCTCCCAAGGCGCTCTGAGATAGTTGCCCAACAACTCAAGCTGGTTGAGAGTTAT
CAGTTGGCTGCAGAAAATTCAGGTACCGAATCAAACCCGAGACTGCAAATCCTTCCACAG
AAACTGTACAGGAAGACTTCTGTAAAGACCTTGAGATCCAGTTCAAGTCAGAACAGCACA
GGTTCCGACTCATGGATTGGTAAGAACGGAGGCACTGGTGTTGCTCGACTGCCTTTCTTG
CCTGAATAA