Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079797
CDS Infomation

pacid=37465585 polypeptide=PGSC0003DMP400054125 locus=PGSC0003DMG400031075 ID=PGSC0003DMT400079797.v4.03 annot-version=v4.03
Sequence

ATGGAAGATCAATGTAGCCCTCTTAGCTGGCCTTATAACTACTACCTAGAAGAGGGGATA
GAGGAATTGAAGCATTCATTGGTGTACACAACATTGGAATTGGAGAATACTGTGATTTCA
GCCCATGAGGAACTTGCAAGAAAAGATGAGGAGATTTTGCAACTTAAGGATCTATTGACT
AGAGTTATGAAAGAAAGAGATGAAGCACAAGGCAAATGTCAAAGGATTGGAATGGAGAAA
ATTGTACTACAACAACAATTGCTCCAACAACAACAAGTACAAGTACAATTTCAATTTCAA
AAACATAACCAAAATAATGTTGTTATAGAAAGTGCACCTATTTCTAGTGGCACAACAATT
AGTCATGATAATCAAGAACATGACCAAATTTTAAAAGGGGTAGTTGACTCTAACCACAAC
AACATTTGTGTACTTTCTAATTCCTCAGATTGTGATGAAAACAATGTTGTTTCACCACCA
TTATTAGTCCAAGATTTAATCGAAAATGTTGTAATCAAGAAGCCATTGCCAGAGAAGGGG
AAATTCTTGCAAGCTGTGATGGAAGCAGGGCCATTACTTCAAACACTTTTACTAGCAGGA
CCACTACCTCAATGGCAACATCCACCACCACAACTCAACTCAATTGACATTCCTCCGGTC
ACTATTACCTCCCCTACTCCGCGTTTGCTACATCAGGACTCTGCCCTGAGTAGTAGCACC
GGGGGAATTTCCCCCGGTGCTAGAACATGTTTTGGGCAAAAAAGGGATGTTGTTGGTGCT
GGTTTTAACATTGTTGAAGGCATTGACACTACTTCAAAGTATCAAAAAGTTGTTCACCAA
TCATCATTGTCCAACATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400054125
PEP Infomation

pacid=37465585 transcript=PGSC0003DMT400079797 locus=PGSC0003DMG400031075 ID=PGSC0003DMT400079797.v4.03 annot-version=v4.03
Sequence

MEDQCSPLSWPYNYYLEEGIEELKHSLVYTTLELENTVISAHEELARKDEEILQLKDLLT
RVMKERDEAQGKCQRIGMEKIVLQQQLLQQQQVQVQFQFQKHNQNNVVIESAPISSGTTI
SHDNQEHDQILKGVVDSNHNNICVLSNSSDCDENNVVSPPLLVQDLIENVVIKKPLPEKG
KFLQAVMEAGPLLQTLLLAGPLPQWQHPPPQLNSIDIPPVTITSPTPRLLHQDSALSSST
GGISPGARTCFGQKRDVVGAGFNIVEGIDTTSKYQKVVHQSSLSNM*

Transcript Sequence

Transcript ID

PGSC0003DMT400079797
Transcript Infomation

pacid=37465585 locus=PGSC0003DMG400031075 ID=PGSC0003DMT400079797.v4.03 annot-version=v4.03
Sequence

ATGGAAGATCAATGTAGCCCTCTTAGCTGGCCTTATAACTACTACCTAGAAGAGGGGATA
GAGGAATTGAAGCATTCATTGGTGTACACAACATTGGAATTGGAGAATACTGTGATTTCA
GCCCATGAGGAACTTGCAAGAAAAGATGAGGAGATTTTGCAACTTAAGGATCTATTGACT
AGAGTTATGAAAGAAAGAGATGAAGCACAAGGCAAATGTCAAAGGATTGGAATGGAGAAA
ATTGTACTACAACAACAATTGCTCCAACAACAACAAGTACAAGTACAATTTCAATTTCAA
AAACATAACCAAAATAATGTTGTTATAGAAAGTGCACCTATTTCTAGTGGCACAACAATT
AGTCATGATAATCAAGAACATGACCAAATTTTAAAAGGGGTAGTTGACTCTAACCACAAC
AACATTTGTGTACTTTCTAATTCCTCAGATTGTGATGAAAACAATGTTGTTTCACCACCA
TTATTAGTCCAAGATTTAATCGAAAATGTTGTAATCAAGAAGCCATTGCCAGAGAAGGGG
AAATTCTTGCAAGCTGTGATGGAAGCAGGGCCATTACTTCAAACACTTTTACTAGCAGGA
CCACTACCTCAATGGCAACATCCACCACCACAACTCAACTCAATTGACATTCCTCCGGTC
ACTATTACCTCCCCTACTCCGCGTTTGCTACATCAGGACTCTGCCCTGAGTAGTAGCACC
GGGGGAATTTCCCCCGGTGCTAGAACATGTTTTGGGCAAAAAAGGGATGTTGTTGGTGCT
GGTTTTAACATTGTTGAAGGCATTGACACTACTTCAAAGTATCAAAAAGTTGTTCACCAA
TCATCATTGTCCAACATGTAG