Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079789
CDS Infomation

pacid=37465871 polypeptide=PGSC0003DMP400054118 locus=PGSC0003DMG400031071 ID=PGSC0003DMT400079789.v4.03 annot-version=v4.03
Sequence

ATGGAATCGAGAGGATCATCGAAATTGTTGGCGCCGGGGTTCAGATTTCATCCGACGGAT
GAAGAATTGGTTAGATACTATCTCCGCCGGAAAATCTATGGAAGGACGTTTAAGTCTGAT
CTTATATCGGAGATCGATATTTACAAGGTTGAACCTTGGGATCTTCCTGGCATGTCAAGG
CTGAAGACAAGAGATTTGGAGTGGTACTTCTTTAGTGTTCTTGATAAGAAGTACGGTAAT
GGAGCAAGGACCAACCGAGCGACAGAAAAAGGCTACTGGAAGACAACCGGAAAGGATAGG
GCTGTCCATCGTAATAAATCTCAGGTTGTTGGGATGAAGAAGACTCTAGTTTATCACAAT
GGTCGTGCTCCAAAGGGTCAGAGAACTAATTGGGTGATGCATGAGTACAGACTGATTGAT
GAGGCGTTAGATAACGCTGGAATTCCTCAGGATGCATTTGTTTTATGCAGAGTCTTCCAG
AAGAGTGGTGCAGGGCCGAAGAATGGGGAACAGTATGGGGCACCTTTTATAGAGGAGGAA
TGGGAGGATGATGAGTTACAAGTTCTTCCGAAGGATGAGACTGCTGAGGATTTTGTATTT
GGTGATGATATTTATTTAGATGCAAATGAACTTGACCAGATTCTTGGGACCGACAAAGCT
GTGGCTGGTGCTTCCCTTCCATTGGATTATTCTTTTGGTGAAAATGGAAGTACGGAGGAG
ACAAATAACTCCTCTGATGCTCAAAATTGGCTGCAGCAACCTGACGAGCTTAAACCAATT
GATCTAGCTGTGCAACAGAATTTTAATGCTGAGCAAGTCAATCATGAATATATTGGTGAA
TCAAGCAAGAACATGAACTCTGAAGATGGGGATTACTTGCTTAATGAACCAATTGTAAAT
GGGACTGATGATCTCCAATTTAACGATGAAGCTTTCCTCGAAGCTAATGATCTTTCAAAT
CCCGTTCAGGTTGACAGCTCTGGTTTCGACATGTTTGAGGAATACCTTACTTACTTTGAT
GCAAATGATGACTTCCAGAATATGAGTTTTGATCCTTCAGTTTTCTTTGGAAATGATGAT
CAAATTTCTGATCAAGCACTGCTGCCTGAGAAGGACGTTGGCGAGGTAACTCAGCAACCT
ATTGCGCCCAATGAAGGGTTTGGTGAAGATAAGAATGGTTTTGCAGCGTCCTCCAAACTG
GTACCAACTAAATTTGGATCAGATTATCAACTTCCATTTATGAAGCAGGCAAGCCAGATG
TTGGGCAATATTCATGCTCCTCCAGCATTTGCTTCAGAGTTTCCTACAAAAGATGCAATT
CTCCGTCTGAACTCATTGTCTCGGTCAGCTAGTCCAGTTCAGGTCACTGCTGATTTAATT
CGAATTAGAGACATGTCTGCTGGTGGCAATGGGACAAGATGGCCATTGGGAAAACATGTG
TATTACAACATTATCCTATCTCTTGGCCTGTCACGGAGTAGTAGTGATGACTCTTCCATG
GATTCATTTCATAGCATTCATCCAGGAAAGACTACTTCGACGATTTCCAGAGGCTGGTTC
TGTTATCTATTTTTTTCGTTCCTAATGCTTTTGATGAGCCTCAGAATTGGAACCACAATC
TGTGCCAGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400054118
PEP Infomation

pacid=37465871 transcript=PGSC0003DMT400079789 locus=PGSC0003DMG400031071 ID=PGSC0003DMT400079789.v4.03 annot-version=v4.03
Sequence

MESRGSSKLLAPGFRFHPTDEELVRYYLRRKIYGRTFKSDLISEIDIYKVEPWDLPGMSR
LKTRDLEWYFFSVLDKKYGNGARTNRATEKGYWKTTGKDRAVHRNKSQVVGMKKTLVYHN
GRAPKGQRTNWVMHEYRLIDEALDNAGIPQDAFVLCRVFQKSGAGPKNGEQYGAPFIEEE
WEDDELQVLPKDETAEDFVFGDDIYLDANELDQILGTDKAVAGASLPLDYSFGENGSTEE
TNNSSDAQNWLQQPDELKPIDLAVQQNFNAEQVNHEYIGESSKNMNSEDGDYLLNEPIVN
GTDDLQFNDEAFLEANDLSNPVQVDSSGFDMFEEYLTYFDANDDFQNMSFDPSVFFGNDD
QISDQALLPEKDVGEVTQQPIAPNEGFGEDKNGFAASSKLVPTKFGSDYQLPFMKQASQM
LGNIHAPPAFASEFPTKDAILRLNSLSRSASPVQVTADLIRIRDMSAGGNGTRWPLGKHV
YYNIILSLGLSRSSSDDSSMDSFHSIHPGKTTSTISRGWFCYLFFSFLMLLMSLRIGTTI
CAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400079789
Transcript Infomation

pacid=37465871 locus=PGSC0003DMG400031071 ID=PGSC0003DMT400079789.v4.03 annot-version=v4.03
Sequence

ATGGAATCGAGAGGATCATCGAAATTGTTGGCGCCGGGGTTCAGATTTCATCCGACGGAT
GAAGAATTGGTTAGATACTATCTCCGCCGGAAAATCTATGGAAGGACGTTTAAGTCTGAT
CTTATATCGGAGATCGATATTTACAAGGTTGAACCTTGGGATCTTCCTGGCATGTCAAGG
CTGAAGACAAGAGATTTGGAGTGGTACTTCTTTAGTGTTCTTGATAAGAAGTACGGTAAT
GGAGCAAGGACCAACCGAGCGACAGAAAAAGGCTACTGGAAGACAACCGGAAAGGATAGG
GCTGTCCATCGTAATAAATCTCAGGTTGTTGGGATGAAGAAGACTCTAGTTTATCACAAT
GGTCGTGCTCCAAAGGGTCAGAGAACTAATTGGGTGATGCATGAGTACAGACTGATTGAT
GAGGCGTTAGATAACGCTGGAATTCCTCAGGATGCATTTGTTTTATGCAGAGTCTTCCAG
AAGAGTGGTGCAGGGCCGAAGAATGGGGAACAGTATGGGGCACCTTTTATAGAGGAGGAA
TGGGAGGATGATGAGTTACAAGTTCTTCCGAAGGATGAGACTGCTGAGGATTTTGTATTT
GGTGATGATATTTATTTAGATGCAAATGAACTTGACCAGATTCTTGGGACCGACAAAGCT
GTGGCTGGTGCTTCCCTTCCATTGGATTATTCTTTTGGTGAAAATGGAAGTACGGAGGAG
ACAAATAACTCCTCTGATGCTCAAAATTGGCTGCAGCAACCTGACGAGCTTAAACCAATT
GATCTAGCTGTGCAACAGAATTTTAATGCTGAGCAAGTCAATCATGAATATATTGGTGAA
TCAAGCAAGAACATGAACTCTGAAGATGGGGATTACTTGCTTAATGAACCAATTGTAAAT
GGGACTGATGATCTCCAATTTAACGATGAAGCTTTCCTCGAAGCTAATGATCTTTCAAAT
CCCGTTCAGGTTGACAGCTCTGGTTTCGACATGTTTGAGGAATACCTTACTTACTTTGAT
GCAAATGATGACTTCCAGAATATGAGTTTTGATCCTTCAGTTTTCTTTGGAAATGATGAT
CAAATTTCTGATCAAGCACTGCTGCCTGAGAAGGACGTTGGCGAGGTAACTCAGCAACCT
ATTGCGCCCAATGAAGGGTTTGGTGAAGATAAGAATGGTTTTGCAGCGTCCTCCAAACTG
GTACCAACTAAATTTGGATCAGATTATCAACTTCCATTTATGAAGCAGGCAAGCCAGATG
TTGGGCAATATTCATGCTCCTCCAGCATTTGCTTCAGAGTTTCCTACAAAAGATGCAATT
CTCCGTCTGAACTCATTGTCTCGGTCAGCTAGTCCAGTTCAGGTCACTGCTGATTTAATT
CGAATTAGAGACATGTCTGCTGGTGGCAATGGGACAAGATGGCCATTGGGAAAACATGTG
TATTACAACATTATCCTATCTCTTGGCCTGTCACGGAGTAGTAGTGATGACTCTTCCATG
GATTCATTTCATAGCATTCATCCAGGAAAGACTACTTCGACGATTTCCAGAGGCTGGTTC
TGTTATCTATTTTTTTCGTTCCTAATGCTTTTGATGAGCCTCAGAATTGGAACCACAATC
TGTGCCAGTTAA