Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079779
CDS Infomation

pacid=37466243 polypeptide=PGSC0003DMP400054112 locus=PGSC0003DMG400031068 ID=PGSC0003DMT400079779.v4.03 annot-version=v4.03
Sequence

ATGGCGCAAATGAAGCTTCCTCATCTTCTTCTTCTTCTTCTCCTTGTTGTTTTTCCTTCA
TTTTCATTCGCGAAGATTTCAGTATTTCCTTCGAGGTTCGCATCGAAGCAAGCGGAGAAA
TTGATTCGGGAGCTCAATTTGTTTCCTAAGGAATCGGATAACATTGTCGATCGGGATCCG
TTTCAGACCGACGATGAAGGTTCTAGGATCGTTGAGAAGCGATTCTCATTCCCTAATTTG
GCGAATTCTAGTGTTTCATTTGAAGATTTGGGGCATCATGCTGGTTATTATAAGATTAAG
CATTCTCATGCTGCTAGGTTGTTCTATTTCTTCTTTGAATCACGCGGAAGTAAGGATGAC
CCTGTTGTCATCTGGTTGAGTGGAGGGCCTGGTTGCAGTAGTGAATTGGCCCTTTTCTAT
GAAAATGGACCTTTTTCTATTTCAAAAAATTTGTCACTTGTGCCGAATGAATATGGGTGG
GACAAGGTATCAAACCTTATCTATGTAGACCAACCTACAGGTACTGGCTTCAGTTACAGT
TCTGACAGACGTGACCTCTGTCACACTGAAACATGTGTTAGCGATGACTTGTATGACTTT
ATTCAGGCATTCTTTGAGGAGCATCCAGAGCTTGTAAAGAACGATTTCTACATAACCGGA
GAATCATATGCTGGGCACTACATTCCTGCTTTTGCTGCAAGAGTACACAAAGGAAATAAG
GGTAAAGAAGGAACACATATAAACTTAAAGGGATTTGCCATTGGGAATGGGCTTACAGAT
CCCAAAATACAATACCCTGCATACACTGACTATGCATTGGACATGGGATTAATTTCGAAG
TCTACTCATGATCGTATCAACAAACTAATTCCAGTTTGTGAAGTCGCAGTAAACCTTTGT
GGCACTGATGGGAAAGTCTCTTGCTTGGCGGCTTATTTTGTTTGCAATTCTATATTCACT
GCTGTCCGCGCAAGTGCTGGGGTTGACATCAATCACTATGACATCAGAAAGAAGTGTGTG
GGACGACTCTGCTACGACTTCTCAGACATGGAAAAAATGCTGAATCTGCGCTCTGTTAAA
AAGGCTCTTGGCGTTGAGGATATAGAGTTTGTCTCTTGTAGTACTACTGTGTACCAGGCA
ATGCTTATTGACTGGATGAGGAACTCCGAAGTAGGAATTCCAACCTTGCTCGAGGATGGA
ATAAAGCTGCTTGTGTATGCTGGAGAATATGATCTCATTTGCAACTGGCTTGGTAACTCA
AGATGGGTTCAGGCCATGGAATGGAAAGGTCAGAAAGAGTTTGTAGCATCTACCGAAGTC
CCCTTTGAAGTTAACGGTTCTGAAGCAGGATTGTTGAGAAGCCACGGGCCTCTAAGTTTC
CTCAAGGTTCATGATGCTGGACACATGGTTCCAATGGATCAGCCTCAAGCTGCCTTAGAG
ATGCTAAAGAGGTGGACTAGAGGCACCCTTTCTCAGCAGACGACTGAACCTGAAAACTTG
GTTGCTTCAATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400054112
PEP Infomation

pacid=37466243 transcript=PGSC0003DMT400079779 locus=PGSC0003DMG400031068 ID=PGSC0003DMT400079779.v4.03 annot-version=v4.03
Sequence

MAQMKLPHLLLLLLLVVFPSFSFAKISVFPSRFASKQAEKLIRELNLFPKESDNIVDRDP
FQTDDEGSRIVEKRFSFPNLANSSVSFEDLGHHAGYYKIKHSHAARLFYFFFESRGSKDD
PVVIWLSGGPGCSSELALFYENGPFSISKNLSLVPNEYGWDKVSNLIYVDQPTGTGFSYS
SDRRDLCHTETCVSDDLYDFIQAFFEEHPELVKNDFYITGESYAGHYIPAFAARVHKGNK
GKEGTHINLKGFAIGNGLTDPKIQYPAYTDYALDMGLISKSTHDRINKLIPVCEVAVNLC
GTDGKVSCLAAYFVCNSIFTAVRASAGVDINHYDIRKKCVGRLCYDFSDMEKMLNLRSVK
KALGVEDIEFVSCSTTVYQAMLIDWMRNSEVGIPTLLEDGIKLLVYAGEYDLICNWLGNS
RWVQAMEWKGQKEFVASTEVPFEVNGSEAGLLRSHGPLSFLKVHDAGHMVPMDQPQAALE
MLKRWTRGTLSQQTTEPENLVASI*

Transcript Sequence

Transcript ID

PGSC0003DMT400079779
Transcript Infomation

pacid=37466243 locus=PGSC0003DMG400031068 ID=PGSC0003DMT400079779.v4.03 annot-version=v4.03
Sequence

ATGGCGCAAATGAAGCTTCCTCATCTTCTTCTTCTTCTTCTCCTTGTTGTTTTTCCTTCA
TTTTCATTCGCGAAGATTTCAGTATTTCCTTCGAGGTTCGCATCGAAGCAAGCGGAGAAA
TTGATTCGGGAGCTCAATTTGTTTCCTAAGGAATCGGATAACATTGTCGATCGGGATCCG
TTTCAGACCGACGATGAAGGTTCTAGGATCGTTGAGAAGCGATTCTCATTCCCTAATTTG
GCGAATTCTAGTGTTTCATTTGAAGATTTGGGGCATCATGCTGGTTATTATAAGATTAAG
CATTCTCATGCTGCTAGGTTGTTCTATTTCTTCTTTGAATCACGCGGAAGTAAGGATGAC
CCTGTTGTCATCTGGTTGAGTGGAGGGCCTGGTTGCAGTAGTGAATTGGCCCTTTTCTAT
GAAAATGGACCTTTTTCTATTTCAAAAAATTTGTCACTTGTGCCGAATGAATATGGGTGG
GACAAGGTATCAAACCTTATCTATGTAGACCAACCTACAGGTACTGGCTTCAGTTACAGT
TCTGACAGACGTGACCTCTGTCACACTGAAACATGTGTTAGCGATGACTTGTATGACTTT
ATTCAGGCATTCTTTGAGGAGCATCCAGAGCTTGTAAAGAACGATTTCTACATAACCGGA
GAATCATATGCTGGGCACTACATTCCTGCTTTTGCTGCAAGAGTACACAAAGGAAATAAG
GGTAAAGAAGGAACACATATAAACTTAAAGGGATTTGCCATTGGGAATGGGCTTACAGAT
CCCAAAATACAATACCCTGCATACACTGACTATGCATTGGACATGGGATTAATTTCGAAG
TCTACTCATGATCGTATCAACAAACTAATTCCAGTTTGTGAAGTCGCAGTAAACCTTTGT
GGCACTGATGGGAAAGTCTCTTGCTTGGCGGCTTATTTTGTTTGCAATTCTATATTCACT
GCTGTCCGCGCAAGTGCTGGGGTTGACATCAATCACTATGACATCAGAAAGAAGTGTGTG
GGACGACTCTGCTACGACTTCTCAGACATGGAAAAAATGCTGAATCTGCGCTCTGTTAAA
AAGGCTCTTGGCGTTGAGGATATAGAGTTTGTCTCTTGTAGTACTACTGTGTACCAGGCA
ATGCTTATTGACTGGATGAGGAACTCCGAAGTAGGAATTCCAACCTTGCTCGAGGATGGA
ATAAAGCTGCTTGTGTATGCTGGAGAATATGATCTCATTTGCAACTGGCTTGGTAACTCA
AGATGGGTTCAGGCCATGGAATGGAAAGGTCAGAAAGAGTTTGTAGCATCTACCGAAGTC
CCCTTTGAAGTTAACGGTTCTGAAGCAGGATTGTTGAGAAGCCACGGGCCTCTAAGTTTC
CTCAAGGTTCATGATGCTGGACACATGGTTCCAATGGATCAGCCTCAAGCTGCCTTAGAG
ATGCTAAAGAGGTGGACTAGAGGCACCCTTTCTCAGCAGACGACTGAACCTGAAAACTTG
GTTGCTTCAATATGA