Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079716
CDS Infomation

pacid=37464061 polypeptide=PGSC0003DMP400054073 locus=PGSC0003DMG401031045 ID=PGSC0003DMT400079716.v4.03 annot-version=v4.03
Sequence

ATGGTGAGGAAGAGGAGAACTGAGTTACCTGGTTCAGGTGAGAGCTCTGGGTCTCAAGAA
ACTGTTGGGGGACAGGGTCGTGGCCAGTATCCACCGCAGCAGCAACAACAAGAAGGTGGA
TACCAAGGTGGAGGACAGGGTCGTGGCATGCGTCCACCACACCAGCAGCAACAACAGCTA
GGTGGCTACCAAGGTGGAGGGCAGGGTCGTGGCCAGCGTCCACCCCAGCAACATCAACAA
GAAGGTGGCTACCAAGGTGGTGGACAGGGTCGTGGCCAGCGTCCACCCCAGCAGCTACAA
CAAGAAGGTGGAGGAAGAGGTTGGAGGCCACAACAGGGAGGATATGGTGGCCGTGGTAGT
GGAGGAGCTCCACCACGTGGAATGGCCCCTCAGCAGTCATATGGTGGACAGCCTGAATAC
TATCAGCAAGGCAGAGGGACTCAGCAGCATCAACAACGAGGTGGAGGACCACCCCAGCAA
CATGGTGGCATAGGTGGCCGTGGAGCACCTTCTGGTGGGCCTTCTAGGCCACCAATTCCC
GAGCTGCACCAAGCAACCACACAGACTCAACATCAAGCTGTAATGACTACTCAGCCCATA
CCTTATGGAAGACCAGCTGACACATCCATGGAAGTGGGTTCCTCATCTGAGCCCCCTGAG
ATGTCAACTCTGCAAGTGACACAACAGTTCCAGCAACTGGCGGTGCAGCCAGAAGCAGCT
GCAACCCAAACAATTCCACCTGTGTCTAGCAAATCACTAAGGTTTCCGCTGCGTCCAGGG
AAGGGAAAGTTTGGTCAGAGTTGCATAGTGAAAGCCAATCACTTCTTTGCGGAGCTACCT
GACAAAGACTTGCACCAGTATGATGTCACCATTACTCCTGAAGTATCTTCACGCGGTGTC
AACCGTGCTGTCATGGCACAGCTGGTGCTTCTTTACCAAGAATCTCATCTTGGAAAGAGA
CTTCCAGCTTATGATGGAAGGAAAAGTCTATACACTGCAGGGCCCCTTCCATTTGTTCAA
AAAGAGTTCAAAATCACTCTTACTGATGATGATGATGGGCCTGGTGGTGCCAGGAGGGAA
AGGGAATTCAAAGTTGTGATCAAATTTGCTTCCCGTGCTGATCTTCATCACTTGGGGATG
TTTTTAGAAGGGAGGCAGGCTGATGCCCCCCAAGAGGCGCTGCAAGTTCTGGATATTGTG
CTTCGTGAGTTGCCGACATCTAAGTATTGTCCCGTAGGTCGTTCTTTCTATTCTCCTAAT
TTAGGGAGACGGCAACCATTGGGCGAGGGTTTAGAGAGTTGGCGGGGTTTCTATCAAAGC
ATTCGCCCCACACAAATGGGATTATCACTGAACATTGATATGTCTTCCACTTCCTTCATC
GAGCCATTGCCGGTCATTGATTTTGTGACACAGCTTCTGAACCGTGATGTGTCATCTAGA
CCACTGTCTGATGCTGACCGTGTAAAGATAAAAAAAGCACTGAGAGGTGTGAAGGTGGAG
GTTACTCATCGTGGAAATATGCGGCGGAAGTACCGCATTGCCAATTTAACATCTCAAGCA
ACAAGAGAGTTAACCTTCCCTGTTGATGAAAAGGGTACTTTGAAATCTGTAATTGAATAT
TTTCGAGAAACTTATGGGTTTGTAATTCAGCATACCCAGTGGCCTTGTCTGCAAGTTGGA
AATCAGCAAAGACCTAATTACTTGCCAATGGAAGTCTGCAAGATTGTGGAGGGACAAAGG
TACTCAAAGCGCTTGAATGAGAAACAGATCACTGCACTTCTGAAAGTGACGTGCCAGCGT
CCCCAAGATAGGGAGCGTGATATTCTTGAGACTGTGAAGCATAATGCCTATGCTGAGGAC
AAATATGCCAAGGAGTTTGGTATTAAGATTAGTGACAAGTTGGCACAAGTTGAGGCTCGT
ATTTTGCCTCCACCTTGGCTTAAATATCATGATAATGGCCGAGAAAAAGACTGCCTGCCA
CAAGTTGGCCAATGGAACATGATGAACAAGAAAATGGTTAATGGAGGAACAGTTGCCAAT
TGGATCTGCATTAACTTTTCTCGCAATGTGCAAGACAGTGTTGCACACGGGTTTTGTTCT
GAGCTTGCACAAATGTGTGGAATATCCGGAATGAACTTCAATCCGAATCCTGTTCTGCCT
CCTACAAGTGCACGCCCTGATCAGGTTGAGAGAGTCTTGAAAACTCGATTTCATGATGCC
ATGACAAAGCTGCAGCCGCTATCGAAGGAGCTCGATCTCCTGGTCGTTATCTTGCCAGAC
AATAATGGATCTCTTTATGGTGACCTGAAACGAATTTGTGAGACTGAGCTTGGAGTTGTC
TCACAGTGCTGTTTGACAAAACATGTATTTAAGATGAGCAAACAGTATCTAGCCAATGTA
GCACTGAAAATTAATGTGAAGGTGGGAGGAAGAAACACTGTGCTAGTTGATGCAATATCT
AGGCGAATTCCCCTTGTCAGCGACCGTCCTACAATCATTTTTGGTGCAGATGTCACCCAT
CCCCACCCTGGAGAGGACTCGAGCCCATCCATTGCTGCGGTGGTTGCTTCTCAAGATTGG
CCTGAGATTACAAAGTATGCTGGTCTAGTTTCTGCTCAAGCCCATCGGCAAGAGCTTATT
CAGGATCTGTACACAACTAGGCAAGATCCTGTTAAAGGGACTGTGTCTGGCGGCATGATT
AAGGACTTACTTATCTCCTTCCGAAGAGCTACTGGGCAAAAACCTCAGAGAATCATTTTC
TACAGGGATGGTGTTAGTGAAGGGCAATTTTATCAAGTTCTGCTTTATGAACTTGATGCG
ATCCGCAAGGCATGTGCATCATTGGAGCCAAATTATCAGCCTCCAGTTACATTTGTTGTG
GTTCAGAAACGACATCATACCAGACTTTTTGCCAATAACCACCGTGACAGAAATGCAGTT
GACCGGAGCGGGAACATTATACCTGGTACTGTTGTTGACTCGAAGATTTGCCACCCAACA
GAGTTTGATTTCTATCTTTGTAGTCATGCTGGCATACAGGGTACGAGTCGTCCAGCTCAT
TACCATGTTCTATGGGACGAGAACAAGTTTACGGCTGATGGACTGCAGTCTTTGACAAAC
AACCTGTGCTATACATATGCAAGGTGCACACGTTCAGTCTCCATCGTTCCCCCGGCCTAT
TATGCACATTTGGCAGCTTTTCGTGCTCGATTCTATATGGAGCCTGAGACATCTGACGGT
GGATCAGTAACAAGCGGAGCTGCTGGCAGAGGGTTTGGTGCAGGAGCTGCTGGAAGGAAC
ACACGAGCACCAGGTGCTGGTGCTGCTGTTAGACCTCTTCCTGCTCTCAAGGATAATGTG
AAGAGGGTCATGTTCTATTGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400054073
PEP Infomation

pacid=37464061 transcript=PGSC0003DMT400079716 locus=PGSC0003DMG401031045 ID=PGSC0003DMT400079716.v4.03 annot-version=v4.03
Sequence

MVRKRRTELPGSGESSGSQETVGGQGRGQYPPQQQQQEGGYQGGGQGRGMRPPHQQQQQL
GGYQGGGQGRGQRPPQQHQQEGGYQGGGQGRGQRPPQQLQQEGGGRGWRPQQGGYGGRGS
GGAPPRGMAPQQSYGGQPEYYQQGRGTQQHQQRGGGPPQQHGGIGGRGAPSGGPSRPPIP
ELHQATTQTQHQAVMTTQPIPYGRPADTSMEVGSSSEPPEMSTLQVTQQFQQLAVQPEAA
ATQTIPPVSSKSLRFPLRPGKGKFGQSCIVKANHFFAELPDKDLHQYDVTITPEVSSRGV
NRAVMAQLVLLYQESHLGKRLPAYDGRKSLYTAGPLPFVQKEFKITLTDDDDGPGGARRE
REFKVVIKFASRADLHHLGMFLEGRQADAPQEALQVLDIVLRELPTSKYCPVGRSFYSPN
LGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTSFIEPLPVIDFVTQLLNRDVSSR
PLSDADRVKIKKALRGVKVEVTHRGNMRRKYRIANLTSQATRELTFPVDEKGTLKSVIEY
FRETYGFVIQHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQR
PQDRERDILETVKHNAYAEDKYAKEFGIKISDKLAQVEARILPPPWLKYHDNGREKDCLP
QVGQWNMMNKKMVNGGTVANWICINFSRNVQDSVAHGFCSELAQMCGISGMNFNPNPVLP
PTSARPDQVERVLKTRFHDAMTKLQPLSKELDLLVVILPDNNGSLYGDLKRICETELGVV
SQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTH
PHPGEDSSPSIAAVVASQDWPEITKYAGLVSAQAHRQELIQDLYTTRQDPVKGTVSGGMI
KDLLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVV
VQKRHHTRLFANNHRDRNAVDRSGNIIPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAH
YHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDG
GSVTSGAAGRGFGAGAAGRNTRAPGAGAAVRPLPALKDNVKRVMFYC*

Transcript Sequence

Transcript ID

PGSC0003DMT400079716
Transcript Infomation

pacid=37464061 locus=PGSC0003DMG401031045 ID=PGSC0003DMT400079716.v4.03 annot-version=v4.03
Sequence

ATGGTGAGGAAGAGGAGAACTGAGTTACCTGGTTCAGGTGAGAGCTCTGGGTCTCAAGAA
ACTGTTGGGGGACAGGGTCGTGGCCAGTATCCACCGCAGCAGCAACAACAAGAAGGTGGA
TACCAAGGTGGAGGACAGGGTCGTGGCATGCGTCCACCACACCAGCAGCAACAACAGCTA
GGTGGCTACCAAGGTGGAGGGCAGGGTCGTGGCCAGCGTCCACCCCAGCAACATCAACAA
GAAGGTGGCTACCAAGGTGGTGGACAGGGTCGTGGCCAGCGTCCACCCCAGCAGCTACAA
CAAGAAGGTGGAGGAAGAGGTTGGAGGCCACAACAGGGAGGATATGGTGGCCGTGGTAGT
GGAGGAGCTCCACCACGTGGAATGGCCCCTCAGCAGTCATATGGTGGACAGCCTGAATAC
TATCAGCAAGGCAGAGGGACTCAGCAGCATCAACAACGAGGTGGAGGACCACCCCAGCAA
CATGGTGGCATAGGTGGCCGTGGAGCACCTTCTGGTGGGCCTTCTAGGCCACCAATTCCC
GAGCTGCACCAAGCAACCACACAGACTCAACATCAAGCTGTAATGACTACTCAGCCCATA
CCTTATGGAAGACCAGCTGACACATCCATGGAAGTGGGTTCCTCATCTGAGCCCCCTGAG
ATGTCAACTCTGCAAGTGACACAACAGTTCCAGCAACTGGCGGTGCAGCCAGAAGCAGCT
GCAACCCAAACAATTCCACCTGTGTCTAGCAAATCACTAAGGTTTCCGCTGCGTCCAGGG
AAGGGAAAGTTTGGTCAGAGTTGCATAGTGAAAGCCAATCACTTCTTTGCGGAGCTACCT
GACAAAGACTTGCACCAGTATGATGTCACCATTACTCCTGAAGTATCTTCACGCGGTGTC
AACCGTGCTGTCATGGCACAGCTGGTGCTTCTTTACCAAGAATCTCATCTTGGAAAGAGA
CTTCCAGCTTATGATGGAAGGAAAAGTCTATACACTGCAGGGCCCCTTCCATTTGTTCAA
AAAGAGTTCAAAATCACTCTTACTGATGATGATGATGGGCCTGGTGGTGCCAGGAGGGAA
AGGGAATTCAAAGTTGTGATCAAATTTGCTTCCCGTGCTGATCTTCATCACTTGGGGATG
TTTTTAGAAGGGAGGCAGGCTGATGCCCCCCAAGAGGCGCTGCAAGTTCTGGATATTGTG
CTTCGTGAGTTGCCGACATCTAAGTATTGTCCCGTAGGTCGTTCTTTCTATTCTCCTAAT
TTAGGGAGACGGCAACCATTGGGCGAGGGTTTAGAGAGTTGGCGGGGTTTCTATCAAAGC
ATTCGCCCCACACAAATGGGATTATCACTGAACATTGATATGTCTTCCACTTCCTTCATC
GAGCCATTGCCGGTCATTGATTTTGTGACACAGCTTCTGAACCGTGATGTGTCATCTAGA
CCACTGTCTGATGCTGACCGTGTAAAGATAAAAAAAGCACTGAGAGGTGTGAAGGTGGAG
GTTACTCATCGTGGAAATATGCGGCGGAAGTACCGCATTGCCAATTTAACATCTCAAGCA
ACAAGAGAGTTAACCTTCCCTGTTGATGAAAAGGGTACTTTGAAATCTGTAATTGAATAT
TTTCGAGAAACTTATGGGTTTGTAATTCAGCATACCCAGTGGCCTTGTCTGCAAGTTGGA
AATCAGCAAAGACCTAATTACTTGCCAATGGAAGTCTGCAAGATTGTGGAGGGACAAAGG
TACTCAAAGCGCTTGAATGAGAAACAGATCACTGCACTTCTGAAAGTGACGTGCCAGCGT
CCCCAAGATAGGGAGCGTGATATTCTTGAGACTGTGAAGCATAATGCCTATGCTGAGGAC
AAATATGCCAAGGAGTTTGGTATTAAGATTAGTGACAAGTTGGCACAAGTTGAGGCTCGT
ATTTTGCCTCCACCTTGGCTTAAATATCATGATAATGGCCGAGAAAAAGACTGCCTGCCA
CAAGTTGGCCAATGGAACATGATGAACAAGAAAATGGTTAATGGAGGAACAGTTGCCAAT
TGGATCTGCATTAACTTTTCTCGCAATGTGCAAGACAGTGTTGCACACGGGTTTTGTTCT
GAGCTTGCACAAATGTGTGGAATATCCGGAATGAACTTCAATCCGAATCCTGTTCTGCCT
CCTACAAGTGCACGCCCTGATCAGGTTGAGAGAGTCTTGAAAACTCGATTTCATGATGCC
ATGACAAAGCTGCAGCCGCTATCGAAGGAGCTCGATCTCCTGGTCGTTATCTTGCCAGAC
AATAATGGATCTCTTTATGGTGACCTGAAACGAATTTGTGAGACTGAGCTTGGAGTTGTC
TCACAGTGCTGTTTGACAAAACATGTATTTAAGATGAGCAAACAGTATCTAGCCAATGTA
GCACTGAAAATTAATGTGAAGGTGGGAGGAAGAAACACTGTGCTAGTTGATGCAATATCT
AGGCGAATTCCCCTTGTCAGCGACCGTCCTACAATCATTTTTGGTGCAGATGTCACCCAT
CCCCACCCTGGAGAGGACTCGAGCCCATCCATTGCTGCGGTGGTTGCTTCTCAAGATTGG
CCTGAGATTACAAAGTATGCTGGTCTAGTTTCTGCTCAAGCCCATCGGCAAGAGCTTATT
CAGGATCTGTACACAACTAGGCAAGATCCTGTTAAAGGGACTGTGTCTGGCGGCATGATT
AAGGACTTACTTATCTCCTTCCGAAGAGCTACTGGGCAAAAACCTCAGAGAATCATTTTC
TACAGGGATGGTGTTAGTGAAGGGCAATTTTATCAAGTTCTGCTTTATGAACTTGATGCG
ATCCGCAAGGCATGTGCATCATTGGAGCCAAATTATCAGCCTCCAGTTACATTTGTTGTG
GTTCAGAAACGACATCATACCAGACTTTTTGCCAATAACCACCGTGACAGAAATGCAGTT
GACCGGAGCGGGAACATTATACCTGGTACTGTTGTTGACTCGAAGATTTGCCACCCAACA
GAGTTTGATTTCTATCTTTGTAGTCATGCTGGCATACAGGGTACGAGTCGTCCAGCTCAT
TACCATGTTCTATGGGACGAGAACAAGTTTACGGCTGATGGACTGCAGTCTTTGACAAAC
AACCTGTGCTATACATATGCAAGGTGCACACGTTCAGTCTCCATCGTTCCCCCGGCCTAT
TATGCACATTTGGCAGCTTTTCGTGCTCGATTCTATATGGAGCCTGAGACATCTGACGGT
GGATCAGTAACAAGCGGAGCTGCTGGCAGAGGGTTTGGTGCAGGAGCTGCTGGAAGGAAC
ACACGAGCACCAGGTGCTGGTGCTGCTGTTAGACCTCTTCCTGCTCTCAAGGATAATGTG
AAGAGGGTCATGTTCTATTGCTAG