Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079712
CDS Infomation

pacid=37459495 polypeptide=PGSC0003DMP400054070 locus=PGSC0003DMG400031043 ID=PGSC0003DMT400079712.v4.03 annot-version=v4.03
Sequence

ATGAGCGGAGTTTTAAGAAACAAAGTACAGAGGAAGTTCAAGATGAGAGGTTACTCTCTC
AAAGTCGAAGCTCTCTCCGAAGTCCTCTCTTTCCTTTCCCATTTCCCCTCTGATGCTCTC
GACGACGCTCTTGAACTCCTTCTCGATGAGCTTCACCATCTTTCATTGAAGTCTTCGATT
TTGGATAGGGAACCGGTGCATAAAGTGGTGAGCCTTTTATTGGAGGCAGATGCCGCTGTT
GAAGAGAACCCTAGCTCCAGTTCTTCATCTGCTTCTGCCCTTCGTGTTATTGATACTTTT
ATTGTCCCTAAATTCCGATACGATCCTGTTAAGAAGTTCTTTCATGAGCACACAGGGAGG
CTTCCCATTCACGGTGATGCTTCTGCAAAAGCCACCTTATACAAGGATAGATTCCTCTTA
TTGTTTCAAAGGGTATCTCGTGATCCACGGTTTTCAACCCTTGCTTTTGATGCCTCTTCT
TCTGATTATGGCAGCTGTGAGATATCTCCCATTCAATCTCTTGTTGGACGAGTAGGGAGA
AGATGGATAATGGGAGTAATATCTCAGTTGGAGGATGGTCATTTCTACTTGGAAGACCTT
ACTGCAGCTGTTGAAGTAAATTTATCGAGTGCAAAGATAACTACAGGTTTCTTTGTGGAA
AATACAATTGTCCTGGCAGAAGGTGAAATGCAATTGGATGGTGTTTTCCAGGTCAGAACA
TGTGGATTTCCTCCATTAGAGGACAGAGAAAAGTCCATGGCTTTTTTTTCCGGACTAGAC
TTCTTTGGTGGTGGTATTCTTACCAAAGAGGAAACTGTATCCTTTTTTAATTGGTTCAAT
AGGATGAAAATTGAAATACCATGGCAGAACTATTCATGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400054070
PEP Infomation

pacid=37459495 transcript=PGSC0003DMT400079712 locus=PGSC0003DMG400031043 ID=PGSC0003DMT400079712.v4.03 annot-version=v4.03
Sequence

MSGVLRNKVQRKFKMRGYSLKVEALSEVLSFLSHFPSDALDDALELLLDELHHLSLKSSI
LDREPVHKVVSLLLEADAAVEENPSSSSSSASALRVIDTFIVPKFRYDPVKKFFHEHTGR
LPIHGDASAKATLYKDRFLLLFQRVSRDPRFSTLAFDASSSDYGSCEISPIQSLVGRVGR
RWIMGVISQLEDGHFYLEDLTAAVEVNLSSAKITTGFFVENTIVLAEGEMQLDGVFQVRT
CGFPPLEDREKSMAFFSGLDFFGGGILTKEETVSFFNWFNRMKIEIPWQNYSW*

Transcript Sequence

Transcript ID

PGSC0003DMT400079712
Transcript Infomation

pacid=37459495 locus=PGSC0003DMG400031043 ID=PGSC0003DMT400079712.v4.03 annot-version=v4.03
Sequence

ATGAGCGGAGTTTTAAGAAACAAAGTACAGAGGAAGTTCAAGATGAGAGGTTACTCTCTC
AAAGTCGAAGCTCTCTCCGAAGTCCTCTCTTTCCTTTCCCATTTCCCCTCTGATGCTCTC
GACGACGCTCTTGAACTCCTTCTCGATGAGCTTCACCATCTTTCATTGAAGTCTTCGATT
TTGGATAGGGAACCGGTGCATAAAGTGGTGAGCCTTTTATTGGAGGCAGATGCCGCTGTT
GAAGAGAACCCTAGCTCCAGTTCTTCATCTGCTTCTGCCCTTCGTGTTATTGATACTTTT
ATTGTCCCTAAATTCCGATACGATCCTGTTAAGAAGTTCTTTCATGAGCACACAGGGAGG
CTTCCCATTCACGGTGATGCTTCTGCAAAAGCCACCTTATACAAGGATAGATTCCTCTTA
TTGTTTCAAAGGGTATCTCGTGATCCACGGTTTTCAACCCTTGCTTTTGATGCCTCTTCT
TCTGATTATGGCAGCTGTGAGATATCTCCCATTCAATCTCTTGTTGGACGAGTAGGGAGA
AGATGGATAATGGGAGTAATATCTCAGTTGGAGGATGGTCATTTCTACTTGGAAGACCTT
ACTGCAGCTGTTGAAGTAAATTTATCGAGTGCAAAGATAACTACAGGTTTCTTTGTGGAA
AATACAATTGTCCTGGCAGAAGGTGAAATGCAATTGGATGGTGTTTTCCAGGTCAGAACA
TGTGGATTTCCTCCATTAGAGGACAGAGAAAAGTCCATGGCTTTTTTTTCCGGACTAGAC
TTCTTTGGTGGTGGTATTCTTACCAAAGAGGAAACTGTATCCTTTTTTAATTGGTTCAAT
AGGATGAAAATTGAAATACCATGGCAGAACTATTCATGGTAG