Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079706
CDS Infomation

pacid=37463637 polypeptide=PGSC0003DMP400054064 locus=PGSC0003DMG400031042 ID=PGSC0003DMT400079706.v4.03 annot-version=v4.03
Sequence

ATGGTGTTAACAACGACTTCCATAAGAGAGTCAGAAGAGAGCTTGCACTGTACATTTGCA
TCAAGATATGTACAGGAACCTTTACCTAAGTTCAAAATCCCTAAAAAATCCATGCCGAAG
GAAGCAGCTTTTCAGATTGTAAACGACGAACTTATGTTGGATGGTAACCCGAGGTTGAAT
CTAGCTTCCTTTGTTAGCACATGGATGGAGCCGGAGTGCGATAAGCTCATCATGGCATCC
ATTAATAAGAACTATGTCGACATGGATGAGTACCCTGTCACCACTGAACTTCAAAATAGG
TGCGTTAACATGTTAGCACATCTTTTCCATGCGCCAGTTGGTGATGATGAGACTGCAGTA
GGAGTTGGTACAGTGGGTTCATCAGAGGCAATCATGCTTGCTGGTCTTGCTTTCAAACGC
AAATGGCAAGCGAAAAGAAAAGCAGAAGGCAAACCTTTTGATAAGCCTAATATAGTCACT
GGAGCTAATGTGCAGGTCTGCTGGGAAAAATTTGCAAGGTACTTTGAGGTTGAATTGAAG
GAGGTGAAACTAAAAGAAGGATACTATGTAATGGACCCTGCCAAAGCAGTAGAGATGGTG
GATGAGAATACAATATGTGTTGCCGCAATCCTTGGTTCTACTCTGACTGGGGAATTTGAG
GATGTGAAGCTCCTAAACGAGCTCCTTACGAAAAAGAACAAGGAAACTGGATGGGATACA
CCGATCCATGTCGATGCTGCGAGTGGAGGATTTATTGCTCCTTTCCTGTGGCCAGATCTC
GAATGGGATTTCCGTTTGCCTCTAGTGAAAAGTATAAATGTCAGTGGTCACAAGTATGGC
CTTGTATATGCTGGTGTCGGTTGGGTGATATGGCGGAGCAAGGAAGACTTGCCCGATGAA
CTCGTCTTTCATATAAATTACCTTGGCTCTGATCAGCCTACTTTTACCCTCAACTTCTCT
AAAGGTTCCTATCAAATAATTGCGCAGTATTATCAGTTAATAAGGCTTGGCTTTGAGGGT
TATAAGGACGTCATGGAGAATTGCTTAGCAAATACAAAAGTACTAACAGAGGGAATCACA
AAAATGGGGCGGTTCGATATTGTCTCTAAGGATGTGGGTGTTCCTGTTGTAGCATTTTCT
CTCAGGGACAGTAGCAAATATACAGTATTTGAAGTGTCCGAGCATCTCAGAAGATTTGGA
TGGATTGTCCCAGCATACACAATGCCACCGGATGCTGAACACATTGCTGTTCTGCGGGTT
GTCATTAGAGAGGATTTCAGCCACAGCCTAGCTGAGAGACTTGTTTCCGACATTGAGAAA
ATTCTGACAGAGTTGGACACACAGCCTTCTCGTTTGCCCACCAAAGCTGTTCGCGTCACT
GCAGAGGAAGTGCGTAATGACAAGGGTGATGGGCTTCATCAGTTTCACATGGATACTGTA
GAGACTCAGAAAGACATAATCAAGCATTGGAGGAAGATCGCAGGGAAGAAGACCAGCGGA
GTCTGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400054064
PEP Infomation

pacid=37463637 transcript=PGSC0003DMT400079706 locus=PGSC0003DMG400031042 ID=PGSC0003DMT400079706.v4.03 annot-version=v4.03
Sequence

MVLTTTSIRESEESLHCTFASRYVQEPLPKFKIPKKSMPKEAAFQIVNDELMLDGNPRLN
LASFVSTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMLAHLFHAPVGDDETAV
GVGTVGSSEAIMLAGLAFKRKWQAKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELK
EVKLKEGYYVMDPAKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNKETGWDT
PIHVDAASGGFIAPFLWPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDLPDE
LVFHINYLGSDQPTFTLNFSKGSYQIIAQYYQLIRLGFEGYKDVMENCLANTKVLTEGIT
KMGRFDIVSKDVGVPVVAFSLRDSSKYTVFEVSEHLRRFGWIVPAYTMPPDAEHIAVLRV
VIREDFSHSLAERLVSDIEKILTELDTQPSRLPTKAVRVTAEEVRNDKGDGLHQFHMDTV
ETQKDIIKHWRKIAGKKTSGVC*

Transcript Sequence

Transcript ID

PGSC0003DMT400079706
Transcript Infomation

pacid=37463637 locus=PGSC0003DMG400031042 ID=PGSC0003DMT400079706.v4.03 annot-version=v4.03
Sequence

ATGGTGTTAACAACGACTTCCATAAGAGAGTCAGAAGAGAGCTTGCACTGTACATTTGCA
TCAAGATATGTACAGGAACCTTTACCTAAGTTCAAAATCCCTAAAAAATCCATGCCGAAG
GAAGCAGCTTTTCAGATTGTAAACGACGAACTTATGTTGGATGGTAACCCGAGGTTGAAT
CTAGCTTCCTTTGTTAGCACATGGATGGAGCCGGAGTGCGATAAGCTCATCATGGCATCC
ATTAATAAGAACTATGTCGACATGGATGAGTACCCTGTCACCACTGAACTTCAAAATAGG
TGCGTTAACATGTTAGCACATCTTTTCCATGCGCCAGTTGGTGATGATGAGACTGCAGTA
GGAGTTGGTACAGTGGGTTCATCAGAGGCAATCATGCTTGCTGGTCTTGCTTTCAAACGC
AAATGGCAAGCGAAAAGAAAAGCAGAAGGCAAACCTTTTGATAAGCCTAATATAGTCACT
GGAGCTAATGTGCAGGTCTGCTGGGAAAAATTTGCAAGGTACTTTGAGGTTGAATTGAAG
GAGGTGAAACTAAAAGAAGGATACTATGTAATGGACCCTGCCAAAGCAGTAGAGATGGTG
GATGAGAATACAATATGTGTTGCCGCAATCCTTGGTTCTACTCTGACTGGGGAATTTGAG
GATGTGAAGCTCCTAAACGAGCTCCTTACGAAAAAGAACAAGGAAACTGGATGGGATACA
CCGATCCATGTCGATGCTGCGAGTGGAGGATTTATTGCTCCTTTCCTGTGGCCAGATCTC
GAATGGGATTTCCGTTTGCCTCTAGTGAAAAGTATAAATGTCAGTGGTCACAAGTATGGC
CTTGTATATGCTGGTGTCGGTTGGGTGATATGGCGGAGCAAGGAAGACTTGCCCGATGAA
CTCGTCTTTCATATAAATTACCTTGGCTCTGATCAGCCTACTTTTACCCTCAACTTCTCT
AAAGGTTCCTATCAAATAATTGCGCAGTATTATCAGTTAATAAGGCTTGGCTTTGAGGGT
TATAAGGACGTCATGGAGAATTGCTTAGCAAATACAAAAGTACTAACAGAGGGAATCACA
AAAATGGGGCGGTTCGATATTGTCTCTAAGGATGTGGGTGTTCCTGTTGTAGCATTTTCT
CTCAGGGACAGTAGCAAATATACAGTATTTGAAGTGTCCGAGCATCTCAGAAGATTTGGA
TGGATTGTCCCAGCATACACAATGCCACCGGATGCTGAACACATTGCTGTTCTGCGGGTT
GTCATTAGAGAGGATTTCAGCCACAGCCTAGCTGAGAGACTTGTTTCCGACATTGAGAAA
ATTCTGACAGAGTTGGACACACAGCCTTCTCGTTTGCCCACCAAAGCTGTTCGCGTCACT
GCAGAGGAAGTGCGTAATGACAAGGGTGATGGGCTTCATCAGTTTCACATGGATACTGTA
GAGACTCAGAAAGACATAATCAAGCATTGGAGGAAGATCGCAGGGAAGAAGACCAGCGGA
GTCTGCTAG