Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079675
CDS Infomation

pacid=37462873 polypeptide=PGSC0003DMP400054045 locus=PGSC0003DMG400031031 ID=PGSC0003DMT400079675.v4.03 annot-version=v4.03
Sequence

ATGACTAAGCCTTATTATACTTCTTTGTTATGTCTATTCATCACCTTATTGCAATTGATC
ATTCCTAGCCAAGAAGCACAAATAACACCACCTCCATTGCCAATTCTCCCATTACCAAAT
TACGCTCAATTAAAATGGCAACAAAGGGAACTCATCATGTTCCTACATTTCGGTGTCAAC
ACGTTCACGGATAGTGAATGGGGCACCGGGGATGAAAATCCTTCGATTTTCAACCCCACA
AACCTAGATGCCAACCAATGGGTTGACACCGCGGTTCAAGCAGGAGTATCGCTAGTGATA
CTCACTGCTAAACACCACGATGGTTTTTGCTTGTGGCCTTCTAAATATACTGATCATTCG
GTTATAAGAAGTCGTTGGAAAAATGGGCAAGGCGATGTGGTTCGAGAATTTGTCAATGCG
GCCAAGGCTCGTGGCGTCGATGTTGGTTTGTACCTTTCGCCATGGGATCGCCATGATAAG
AGTTATGGGCTAAATAAGGAGTACAATGAACATTATTTGGCTCAACTACAAGAACTTCTC
AATAAATATGGAGATGTTAAAGAGATATGGTTTGATGGAGCTAAGGGTTCAAATGTACCA
AACATGACTTACTACTTCGATGATTGGTTTGCAATGGTGAATGAATTGCAGAGTGCAATC
AACATATTTTCCGATGCCGGACCGGGAGTCCGATGGGTCGGAAATGAGCATGGATTCGCC
GGAAACACAAGTTGGTCCACCATCAATCGAACATTGTTGTCTATTGGCGGTAGCAACGCT
GATTATCTCAACAGTGGAGACCCAAAAGGGACAGATTGGTTACCACCAGAATGTGATGTA
TCAATTCGACCAGGATGGTTTTGGCATAAATCACAAGAACCAAAGAGCCTAAGTGAGTTG
CTCAAAATTTACTACAATTCCATCGGACGAAATTGCGTATTGCTACTTAACGTGCCTCCT
AACACACAAGGATTAATAACCAACAGCGATGTGCAAAGACTCAAAGAATTTAGAAGTGCA
ATTGACACAATATTCTCCACCAATTTAGCCAAGGAATGTTCAATCAAAGCAAGTAGTCAA
AGGGGAGGTAAGAATGGAGGATTCGGACCCGAAAACATGCTAGACGATGACCATTTATGG
ACATATTGGGGTCCAAAAGATGATAAAGAGGATAATTGGATTGAGTTCAAAACAAAGAGT
AATAAGTCGTTGAGGTTTAATGTGGTAAGGATTCAAGAAGCAATTGGGCTAGGACAAAGG
GTAAAAAGTCATGAAATTTATGTTGATGGGAAGAGAATTGCTAATGGAACTACAATAGGA
TACAAGAAGCTTCACAGGATTGAAAAAGGGGTGGTGAGTAATGCTAAAAGTGTGAAGATA
AAGATAATTGGATCAAAGGGAACTCCTTTGATTTCATCAATTGGTCTCCATTTTGATCCC
TTTTGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400054045
PEP Infomation

pacid=37462873 transcript=PGSC0003DMT400079675 locus=PGSC0003DMG400031031 ID=PGSC0003DMT400079675.v4.03 annot-version=v4.03
Sequence

MTKPYYTSLLCLFITLLQLIIPSQEAQITPPPLPILPLPNYAQLKWQQRELIMFLHFGVN
TFTDSEWGTGDENPSIFNPTNLDANQWVDTAVQAGVSLVILTAKHHDGFCLWPSKYTDHS
VIRSRWKNGQGDVVREFVNAAKARGVDVGLYLSPWDRHDKSYGLNKEYNEHYLAQLQELL
NKYGDVKEIWFDGAKGSNVPNMTYYFDDWFAMVNELQSAINIFSDAGPGVRWVGNEHGFA
GNTSWSTINRTLLSIGGSNADYLNSGDPKGTDWLPPECDVSIRPGWFWHKSQEPKSLSEL
LKIYYNSIGRNCVLLLNVPPNTQGLITNSDVQRLKEFRSAIDTIFSTNLAKECSIKASSQ
RGGKNGGFGPENMLDDDHLWTYWGPKDDKEDNWIEFKTKSNKSLRFNVVRIQEAIGLGQR
VKSHEIYVDGKRIANGTTIGYKKLHRIEKGVVSNAKSVKIKIIGSKGTPLISSIGLHFDP
FW*

Transcript Sequence

Transcript ID

PGSC0003DMT400079675
Transcript Infomation

pacid=37462873 locus=PGSC0003DMG400031031 ID=PGSC0003DMT400079675.v4.03 annot-version=v4.03
Sequence

ATGACTAAGCCTTATTATACTTCTTTGTTATGTCTATTCATCACCTTATTGCAATTGATC
ATTCCTAGCCAAGAAGCACAAATAACACCACCTCCATTGCCAATTCTCCCATTACCAAAT
TACGCTCAATTAAAATGGCAACAAAGGGAACTCATCATGTTCCTACATTTCGGTGTCAAC
ACGTTCACGGATAGTGAATGGGGCACCGGGGATGAAAATCCTTCGATTTTCAACCCCACA
AACCTAGATGCCAACCAATGGGTTGACACCGCGGTTCAAGCAGGAGTATCGCTAGTGATA
CTCACTGCTAAACACCACGATGGTTTTTGCTTGTGGCCTTCTAAATATACTGATCATTCG
GTTATAAGAAGTCGTTGGAAAAATGGGCAAGGCGATGTGGTTCGAGAATTTGTCAATGCG
GCCAAGGCTCGTGGCGTCGATGTTGGTTTGTACCTTTCGCCATGGGATCGCCATGATAAG
AGTTATGGGCTAAATAAGGAGTACAATGAACATTATTTGGCTCAACTACAAGAACTTCTC
AATAAATATGGAGATGTTAAAGAGATATGGTTTGATGGAGCTAAGGGTTCAAATGTACCA
AACATGACTTACTACTTCGATGATTGGTTTGCAATGGTGAATGAATTGCAGAGTGCAATC
AACATATTTTCCGATGCCGGACCGGGAGTCCGATGGGTCGGAAATGAGCATGGATTCGCC
GGAAACACAAGTTGGTCCACCATCAATCGAACATTGTTGTCTATTGGCGGTAGCAACGCT
GATTATCTCAACAGTGGAGACCCAAAAGGGACAGATTGGTTACCACCAGAATGTGATGTA
TCAATTCGACCAGGATGGTTTTGGCATAAATCACAAGAACCAAAGAGCCTAAGTGAGTTG
CTCAAAATTTACTACAATTCCATCGGACGAAATTGCGTATTGCTACTTAACGTGCCTCCT
AACACACAAGGATTAATAACCAACAGCGATGTGCAAAGACTCAAAGAATTTAGAAGTGCA
ATTGACACAATATTCTCCACCAATTTAGCCAAGGAATGTTCAATCAAAGCAAGTAGTCAA
AGGGGAGGTAAGAATGGAGGATTCGGACCCGAAAACATGCTAGACGATGACCATTTATGG
ACATATTGGGGTCCAAAAGATGATAAAGAGGATAATTGGATTGAGTTCAAAACAAAGAGT
AATAAGTCGTTGAGGTTTAATGTGGTAAGGATTCAAGAAGCAATTGGGCTAGGACAAAGG
GTAAAAAGTCATGAAATTTATGTTGATGGGAAGAGAATTGCTAATGGAACTACAATAGGA
TACAAGAAGCTTCACAGGATTGAAAAAGGGGTGGTGAGTAATGCTAAAAGTGTGAAGATA
AAGATAATTGGATCAAAGGGAACTCCTTTGATTTCATCAATTGGTCTCCATTTTGATCCC
TTTTGGTAG