Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079664
CDS Infomation

pacid=37460554 polypeptide=PGSC0003DMP400054039 locus=PGSC0003DMG400031027 ID=PGSC0003DMT400079664.v4.03 annot-version=v4.03
Sequence

ATGAGGCTCGTTGTGCCCTTACAAGGTGTAGTTCAAGGCAGAGGCGGCCTTATTTTAGGC
TCACTCATTCCTTGTGCACTTTTCTACTTTCTCCAATTCTACTCAAAACGACACCGTACT
ACCCCGTCTTCTTCTAATCCTCCGTCACCGTCCACGTCGTCGCCGAACCTCTCCGAGTTA
CAACGCTCGTCTTCACGTTTAAATTTGTCAACTCGTGGTTCTGTTGGCCGTGTCTTCTTG
TCTTCAAGGGCTAGTTTGGTTGCTGCACCGAATGATTCCCCTTACTACATTGGAATGGAT
AGGTTCCGAGCGGATCCGTACGATGAATTGGATAATCCCGACGGTGTTATTGATCTCGGA
ATTGCGGAAAACAGGTTGTCGCTAGATTTGATTGAGAAGTGGATTTCAAGCAATGTGAAC
GGTTCCACGCTTGGAAGTTGCGGTGATGGATTGAATATCAATGGAATTCTTACATACCAG
CCATTTGATGGATTGGCTGAGCTGAAAGTGGCCATGGCAGGCTTCATGTCTCAGGTCATG
GGAGAAAAAGTGTCATTTGATCCATCTCGAATGGTGTTAACATCAGGTGCAACTCCGGCC
ATTGAGGTTCTGTGCTTTTGTTTGGCTGACCACGGGAATGCTTTGCTTGTTCCAACCCCC
TATTATCCTGGCTTTGATAGGGACATAAGATGGAGAACTGGTGTAGATCTTATACCTGTT
CACTGTCGTAGCTCCGATGCTTTCATGGTGGATATAATAGCTCTTGATCAAGCATTTAGT
CATGCAAGAAAGCGAGGGCAAAAGGTCCGTGGAATACTTATCTCAAACCCGTCTAACCCT
GTAGGGAACATTATGAGTAGGGAAACGCTATGCAGAATCTTAGATTTTGCGAGGGAGAAG
AACATCCATGTAATATCAGATGAAATATTTGCTGGATCTAATTATGGTGGTACAGAGTTT
GTAAGCATTGCTGAAATTCTTGATGAAGAGGATCCTGACAGGGACAGGGTTCATATAATA
TATGGATTATCCAAAGACCTTTCTGTGCCAGGGTTTAGGCTCGGTGTTCTGTATTCCTTC
AATGAGAATGTTGTGGCAGCATCTAAAAAGTTGACAAGATTTTGTGCCGCTTCAGCACCA
ACACAGAGCCTATTAGTTGCAATGCTTTCAGATGCTGGGTTCATCAAGGATTATATGAGA
ACAAACAGAGAGAGATTGCGCAAAGTGTTTGACTTATTTGTGGCAGGTCTAAAACAATTG
GGCATTGAATGCATGAACAGCAGTGCAGGCCTGTATTGTTGGGTTAATATGAGCGGATTG
ATTTGCCCTTATAATGAAAAGGGAGAGCTTGAGCTGTGGGAGAAGCTCTTGAATGTAGCT
AAGATAAACGTGACTCCAGGGTCAGCTTGCCATTGTATTGAACCTGGATGGTTCAGATGT
TGTTTTAGTACGGTAGAAGAAAAGGACATTCCTGTAGTTATGGAACGGATACGTAAAGTT
GTTGAACGTAGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400054039
PEP Infomation

pacid=37460554 transcript=PGSC0003DMT400079664 locus=PGSC0003DMG400031027 ID=PGSC0003DMT400079664.v4.03 annot-version=v4.03
Sequence

MRLVVPLQGVVQGRGGLILGSLIPCALFYFLQFYSKRHRTTPSSSNPPSPSTSSPNLSEL
QRSSSRLNLSTRGSVGRVFLSSRASLVAAPNDSPYYIGMDRFRADPYDELDNPDGVIDLG
IAENRLSLDLIEKWISSNVNGSTLGSCGDGLNINGILTYQPFDGLAELKVAMAGFMSQVM
GEKVSFDPSRMVLTSGATPAIEVLCFCLADHGNALLVPTPYYPGFDRDIRWRTGVDLIPV
HCRSSDAFMVDIIALDQAFSHARKRGQKVRGILISNPSNPVGNIMSRETLCRILDFAREK
NIHVISDEIFAGSNYGGTEFVSIAEILDEEDPDRDRVHIIYGLSKDLSVPGFRLGVLYSF
NENVVAASKKLTRFCAASAPTQSLLVAMLSDAGFIKDYMRTNRERLRKVFDLFVAGLKQL
GIECMNSSAGLYCWVNMSGLICPYNEKGELELWEKLLNVAKINVTPGSACHCIEPGWFRC
CFSTVEEKDIPVVMERIRKVVERS*

Transcript Sequence

Transcript ID

PGSC0003DMT400079664
Transcript Infomation

pacid=37460554 locus=PGSC0003DMG400031027 ID=PGSC0003DMT400079664.v4.03 annot-version=v4.03
Sequence

ATGAGGCTCGTTGTGCCCTTACAAGGTGTAGTTCAAGGCAGAGGCGGCCTTATTTTAGGC
TCACTCATTCCTTGTGCACTTTTCTACTTTCTCCAATTCTACTCAAAACGACACCGTACT
ACCCCGTCTTCTTCTAATCCTCCGTCACCGTCCACGTCGTCGCCGAACCTCTCCGAGTTA
CAACGCTCGTCTTCACGTTTAAATTTGTCAACTCGTGGTTCTGTTGGCCGTGTCTTCTTG
TCTTCAAGGGCTAGTTTGGTTGCTGCACCGAATGATTCCCCTTACTACATTGGAATGGAT
AGGTTCCGAGCGGATCCGTACGATGAATTGGATAATCCCGACGGTGTTATTGATCTCGGA
ATTGCGGAAAACAGGTTGTCGCTAGATTTGATTGAGAAGTGGATTTCAAGCAATGTGAAC
GGTTCCACGCTTGGAAGTTGCGGTGATGGATTGAATATCAATGGAATTCTTACATACCAG
CCATTTGATGGATTGGCTGAGCTGAAAGTGGCCATGGCAGGCTTCATGTCTCAGGTCATG
GGAGAAAAAGTGTCATTTGATCCATCTCGAATGGTGTTAACATCAGGTGCAACTCCGGCC
ATTGAGGTTCTGTGCTTTTGTTTGGCTGACCACGGGAATGCTTTGCTTGTTCCAACCCCC
TATTATCCTGGCTTTGATAGGGACATAAGATGGAGAACTGGTGTAGATCTTATACCTGTT
CACTGTCGTAGCTCCGATGCTTTCATGGTGGATATAATAGCTCTTGATCAAGCATTTAGT
CATGCAAGAAAGCGAGGGCAAAAGGTCCGTGGAATACTTATCTCAAACCCGTCTAACCCT
GTAGGGAACATTATGAGTAGGGAAACGCTATGCAGAATCTTAGATTTTGCGAGGGAGAAG
AACATCCATGTAATATCAGATGAAATATTTGCTGGATCTAATTATGGTGGTACAGAGTTT
GTAAGCATTGCTGAAATTCTTGATGAAGAGGATCCTGACAGGGACAGGGTTCATATAATA
TATGGATTATCCAAAGACCTTTCTGTGCCAGGGTTTAGGCTCGGTGTTCTGTATTCCTTC
AATGAGAATGTTGTGGCAGCATCTAAAAAGTTGACAAGATTTTGTGCCGCTTCAGCACCA
ACACAGAGCCTATTAGTTGCAATGCTTTCAGATGCTGGGTTCATCAAGGATTATATGAGA
ACAAACAGAGAGAGATTGCGCAAAGTGTTTGACTTATTTGTGGCAGGTCTAAAACAATTG
GGCATTGAATGCATGAACAGCAGTGCAGGCCTGTATTGTTGGGTTAATATGAGCGGATTG
ATTTGCCCTTATAATGAAAAGGGAGAGCTTGAGCTGTGGGAGAAGCTCTTGAATGTAGCT
AAGATAAACGTGACTCCAGGGTCAGCTTGCCATTGTATTGAACCTGGATGGTTCAGATGT
TGTTTTAGTACGGTAGAAGAAAAGGACATTCCTGTAGTTATGGAACGGATACGTAAAGTT
GTTGAACGTAGTTAG