Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079663
CDS Infomation

pacid=37462340 polypeptide=PGSC0003DMP400054038 locus=PGSC0003DMG400031026 ID=PGSC0003DMT400079663.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTTTTTCATCTAAAGATCCTTCCGCACTGTCCTATCCAAAGTCACTATTGTCT
ATCGTAACTACAGTAGGAGGTCTTGCTGTGTTTTTAATTCTTGCTTCCTCATTTCTGGTT
TCTCAGCCTATTGGGGCTGCAGTCCATGAGTATTTTTATGGTGTTCATCAGTTGACAAGG
CCTAATTTATTAGATGGGGATAGGGTAAAATTTGCTGATCCTCGACGTGATGATGTTGGT
ATTAATGGTACACCTAACTTTAATTTGACGGCGAAGGAAAACAATGAAAAAGGACTTGAG
GATGAAAAGGACCAGATTTCCAAATCTCAAGACGAAAAGAAAGAGCCAGATTCTAAGGGG
GAGCTAGTTGAAAATTCTACCCAAATACCTGTTTTGTCAGAATCCAATCATTCTGTGGTT
CAACCACATCCTGAATCAAAGCAAGAAGACGAGAAGAGTAACAATGTTAGTTCGCATAAG
GAAAGCAAGAATGAAGGGACTCTTCCATCTTCTGATACCCATTCAGAGGACGTAAAATCT
TCATCTACTGGACCCAATAGCGTAAATCAGGCTAAGCTAGATCCAGAATGTGATCTATAT
CATGGAAAATGGATTTCTGATCAGTCTGGACCATTGTACAGAAATGACTCCTGTCCTGTC
CTGACACAGATGCAGAACTGTCAAGGAAATGGAAGGCCTGATAAGGATTATGAGAACTGG
CGATGGAAACCAGCTCAGTGTGAACTGCCACGATTTGATCCAAAGAAGTTTTTGGAACTA
ATGAGAGGAAAGACTTTAGCTTTCATTGGTGACTCAGTTGCTCGCAACCAGATGGAGTCA
ATGCTGTGTATCCTTTGGCAGTATGAGGTTCCGAAGAATCGTGGGAACAAAAGAATGCAG
CGGTACTATTTCAGATCCACATCTACTATGATTGTTCGCATTTGGTCTTCATGGCTTGTC
AACCAAACATCTGGACCTCTTGATTTCGCTCCAGCAGGTGTAGTTAAGCTCCACCTTGAT
GTTCCTGATGATGGGTTCATGCAATACATCCCCCAGTTTGATGTCGTTGTGCTCTCCTCC
GGCCACTGGTTTGCAAAGCAATCTGTTTATGTTCTGAATAATGAGATTGTTGGAGGACAA
CTGTGGTGGCCAGACAAGTCTAGAAAGATGAAGGTCAATAATGTTGAAGCTTTTGGAATC
TCTGTTGAAACCATCCTGACTGCCATGGCAACACATCCGAATTTCAGTGGTATTACCATT
GTTCGTTCCTTTTCACCTGATCATTACGAGGGCGGAGCATGGAACACGGGAGGATCATGT
ACTGGAAAGGTGAAGCCTGCAGAGGATGGTGAGCTGGCTGAAAATGGCTTCACAAACATA
ATGCACGAAAAGCAATTCTCGGGTTACACTCATGCAATTAAGAAGAAAAACAACAAGTCC
GCCTTACTATTTATGGATATCACAGGAGTCTTTGCATATCGCCATGATGGACATCCTGGT
CCTTACAGAAGCCCCGATCCAAACAAAATCACAAAACGAGGTCCTGATGGTAAACCCCCT
TCACAAGATTGCTTGCATTGGTGCATGCCAGGTCCTGTTGATACATGGAATGAGCTGGTA
TTTGATCTTGTAAGGAGAGAATTCGAGAGAAGACAGAGTAATGCTTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400054038
PEP Infomation

pacid=37462340 transcript=PGSC0003DMT400079663 locus=PGSC0003DMG400031026 ID=PGSC0003DMT400079663.v4.03 annot-version=v4.03
Sequence

MSSFSSKDPSALSYPKSLLSIVTTVGGLAVFLILASSFLVSQPIGAAVHEYFYGVHQLTR
PNLLDGDRVKFADPRRDDVGINGTPNFNLTAKENNEKGLEDEKDQISKSQDEKKEPDSKG
ELVENSTQIPVLSESNHSVVQPHPESKQEDEKSNNVSSHKESKNEGTLPSSDTHSEDVKS
SSTGPNSVNQAKLDPECDLYHGKWISDQSGPLYRNDSCPVLTQMQNCQGNGRPDKDYENW
RWKPAQCELPRFDPKKFLELMRGKTLAFIGDSVARNQMESMLCILWQYEVPKNRGNKRMQ
RYYFRSTSTMIVRIWSSWLVNQTSGPLDFAPAGVVKLHLDVPDDGFMQYIPQFDVVVLSS
GHWFAKQSVYVLNNEIVGGQLWWPDKSRKMKVNNVEAFGISVETILTAMATHPNFSGITI
VRSFSPDHYEGGAWNTGGSCTGKVKPAEDGELAENGFTNIMHEKQFSGYTHAIKKKNNKS
ALLFMDITGVFAYRHDGHPGPYRSPDPNKITKRGPDGKPPSQDCLHWCMPGPVDTWNELV
FDLVRREFERRQSNAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400079663
Transcript Infomation

pacid=37462340 locus=PGSC0003DMG400031026 ID=PGSC0003DMT400079663.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTTTTTCATCTAAAGATCCTTCCGCACTGTCCTATCCAAAGTCACTATTGTCT
ATCGTAACTACAGTAGGAGGTCTTGCTGTGTTTTTAATTCTTGCTTCCTCATTTCTGGTT
TCTCAGCCTATTGGGGCTGCAGTCCATGAGTATTTTTATGGTGTTCATCAGTTGACAAGG
CCTAATTTATTAGATGGGGATAGGGTAAAATTTGCTGATCCTCGACGTGATGATGTTGGT
ATTAATGGTACACCTAACTTTAATTTGACGGCGAAGGAAAACAATGAAAAAGGACTTGAG
GATGAAAAGGACCAGATTTCCAAATCTCAAGACGAAAAGAAAGAGCCAGATTCTAAGGGG
GAGCTAGTTGAAAATTCTACCCAAATACCTGTTTTGTCAGAATCCAATCATTCTGTGGTT
CAACCACATCCTGAATCAAAGCAAGAAGACGAGAAGAGTAACAATGTTAGTTCGCATAAG
GAAAGCAAGAATGAAGGGACTCTTCCATCTTCTGATACCCATTCAGAGGACGTAAAATCT
TCATCTACTGGACCCAATAGCGTAAATCAGGCTAAGCTAGATCCAGAATGTGATCTATAT
CATGGAAAATGGATTTCTGATCAGTCTGGACCATTGTACAGAAATGACTCCTGTCCTGTC
CTGACACAGATGCAGAACTGTCAAGGAAATGGAAGGCCTGATAAGGATTATGAGAACTGG
CGATGGAAACCAGCTCAGTGTGAACTGCCACGATTTGATCCAAAGAAGTTTTTGGAACTA
ATGAGAGGAAAGACTTTAGCTTTCATTGGTGACTCAGTTGCTCGCAACCAGATGGAGTCA
ATGCTGTGTATCCTTTGGCAGTATGAGGTTCCGAAGAATCGTGGGAACAAAAGAATGCAG
CGGTACTATTTCAGATCCACATCTACTATGATTGTTCGCATTTGGTCTTCATGGCTTGTC
AACCAAACATCTGGACCTCTTGATTTCGCTCCAGCAGGTGTAGTTAAGCTCCACCTTGAT
GTTCCTGATGATGGGTTCATGCAATACATCCCCCAGTTTGATGTCGTTGTGCTCTCCTCC
GGCCACTGGTTTGCAAAGCAATCTGTTTATGTTCTGAATAATGAGATTGTTGGAGGACAA
CTGTGGTGGCCAGACAAGTCTAGAAAGATGAAGGTCAATAATGTTGAAGCTTTTGGAATC
TCTGTTGAAACCATCCTGACTGCCATGGCAACACATCCGAATTTCAGTGGTATTACCATT
GTTCGTTCCTTTTCACCTGATCATTACGAGGGCGGAGCATGGAACACGGGAGGATCATGT
ACTGGAAAGGTGAAGCCTGCAGAGGATGGTGAGCTGGCTGAAAATGGCTTCACAAACATA
ATGCACGAAAAGCAATTCTCGGGTTACACTCATGCAATTAAGAAGAAAAACAACAAGTCC
GCCTTACTATTTATGGATATCACAGGAGTCTTTGCATATCGCCATGATGGACATCCTGGT
CCTTACAGAAGCCCCGATCCAAACAAAATCACAAAACGAGGTCCTGATGGTAAACCCCCT
TCACAAGATTGCTTGCATTGGTGCATGCCAGGTCCTGTTGATACATGGAATGAGCTGGTA
TTTGATCTTGTAAGGAGAGAATTCGAGAGAAGACAGAGTAATGCTTCATGA