Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079660
CDS Infomation

pacid=37462769 polypeptide=PGSC0003DMP400054035 locus=PGSC0003DMG400031025 ID=PGSC0003DMT400079660.v4.03 annot-version=v4.03
Sequence

ATGACAGCTGCTCAAGGTGATCCAATTCAGCAAATGGAAACTACATGTGGAACATTGCTA
TATGAATTGCAGATTATATGGGATGAAGTTGGGGAATCTGATACTGAAAGGGACAAAATG
CTGTATGAGCTTGAACGAGAATGTTTAGAAGTATATAGAAGAAAAGTGGATCAAGCAAAT
AAGAGTAGAGCTCAATTAAGGCAGGCAATTGCTGATGCTGAAGCAGAGCTTGCAGCTATC
TGTTCTGCGATGGGGGAGCGACCAGTGCATATTAGACAGTCTGATCAGAGCCTTGGAGGT
CTGAAGGCAGAACTTAGAACCATTCTTCCAGAATTGGAAGAGATGCGCAATAGGAAATCT
GATAGAAAGAATCAATTCATTGAAGTTACAAAGCAGTTACAGAAGATTAGGGATGAAATT
TTTAATCCCACTGGTTGTACTTCTACTTCTGTGGTAGTTGATAAAAGTGATTTATCTTTA
AGAAAGCTAGAAGAATTACATGCTGAACTGCAGGCACTTCAAAAGGAGAAGAATGAACGC
TTGAAACAAGTTTTGGACCACCTAAGTACTTTGAACTCACTATGCTTGGTTCTTGGTATG
GATTTCAAACATACTGTCAATGAGGTTCATCCGAGTCTAGGGGAATCTGAAGGAACCAAG
AATATAAGTAATGATACAATCCAACATTTAGCTGCTGCAATAGGAAGACTACGAGAGGTT
AAGTTACTCAGGATGAAACGGCTGCAAGAGCTTGCATCTTCCATGTTGGAACTATGGAAT
TTGATGGACACCCCCATTGAAGAGCAACAGACTTTTCAGAATGTTACTTGTAAGATAGCT
GCCTCAGAACATGAGATAACAGAGCCAAATATCCTGTCAGTGGAATTCATTAACTATGTT
GAGGGAGAATTGTCCCGCTTGGAAGAGTTGAAAGCAAGCAAAATGAAAGAGCTTGTTTTA
AAGAAAAGATCAGAACTAGAAGAGATCTGCAGAAAAACACACATGGTTGCTGATTCAGAT
AATGCAATGGATGTTGCTATTGAAGCTATTGAATCTGGAGCTGTTGATGCTGCTTCTATC
CTCGAGCAAATTGAACTCCAAATAGCACAAGTTAAAGAAGAAGCTTTCAGCAGGAAAGAA
ATATTAGACAAGGTGGAGAAATGGATAGCCGCATGTGAGGAGGAGTGTTGGCTTGAAGAA
TACAACAGGGATGAAAATCGATACAATGCTGGACGAGGTGCCCACCTTACTCTAAAGCGT
GCTGAGAAAGCTCGTACTTTAGTTAATAAGCTTCCAGCAATGGTAGAAGCATTGGCATCA
AAAACAAAAGCATGGGAAAGTGAGAGGGGGATCGATTTCACTTATGATGGAATCCGTCTT
CTTGCTATGCTTGAAGAGTATAACATCTTACGACAAGAAAAGGAGGAAGAACGTAAAAGA
CAACGAGACCAGAAGAAACTTCAGGGACAATTAATGGCAGAACATGAAGCTATCTATGGC
TCAAAGCCCAGCCCTATGAAGAACCAAAGTGCCAAAAAGGGTCGTAGAATGTCATGCAGT
GGTGCAACCAATAGAAGGCTTTCTGTTGGAGGAACAATGCTCCAAACTCCGAAGCTTTCT
ATTGGAGGAACAATGCCTCAAACTCCAAAGACTGAATTCCATTCAACCAAAGCTACACCA
AACACACATCACACAAAGAAATCTGATCTCTTTCATCAAAGAGATCAATTCAATTATTCT
AACGATGATGGATTGCCAGCTCTATCAGCAGGGCGGAAAGGTCTGGATCTTGCTGGACTT
CCTTTGAAAAAGCAGTCCAATTCAGTAAATGGTTGCGAGATGGAGAAAACTATGACACGG
AAGCCTTTCTCCCCCATTTCTTCCACTGATTCATCCAAGTTCAATGCAACTAACATTTTG
GAAGATCTGAATAGAAAGCATAATCATAATGAGATGGTGAATAAGATGCTTCCAAGTAGC
CAAATTCCATTCTCTACTCCAGTGAAGACACTTTATACTACAGAAGAAGAGAACAGAACT
CCTCTCGCAGTGGCAACAATTCCTGTCACTTCTACTCCTTTAACTGTGTCTGCCCCTATG
CAGACGGCTGTAACACCGATTCATAATGCTCTTGTTCCTTACAATTATTCCAAGACAGTT
GAGGAGATTCCTGTAGAGATTGAGTATTCTTTTGAGGAGAGGAGGCTTGGATTTGTTCTT
CCCAGAACACAAGTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400054035
PEP Infomation

pacid=37462769 transcript=PGSC0003DMT400079660 locus=PGSC0003DMG400031025 ID=PGSC0003DMT400079660.v4.03 annot-version=v4.03
Sequence

MTAAQGDPIQQMETTCGTLLYELQIIWDEVGESDTERDKMLYELERECLEVYRRKVDQAN
KSRAQLRQAIADAEAELAAICSAMGERPVHIRQSDQSLGGLKAELRTILPELEEMRNRKS
DRKNQFIEVTKQLQKIRDEIFNPTGCTSTSVVVDKSDLSLRKLEELHAELQALQKEKNER
LKQVLDHLSTLNSLCLVLGMDFKHTVNEVHPSLGESEGTKNISNDTIQHLAAAIGRLREV
KLLRMKRLQELASSMLELWNLMDTPIEEQQTFQNVTCKIAASEHEITEPNILSVEFINYV
EGELSRLEELKASKMKELVLKKRSELEEICRKTHMVADSDNAMDVAIEAIESGAVDAASI
LEQIELQIAQVKEEAFSRKEILDKVEKWIAACEEECWLEEYNRDENRYNAGRGAHLTLKR
AEKARTLVNKLPAMVEALASKTKAWESERGIDFTYDGIRLLAMLEEYNILRQEKEEERKR
QRDQKKLQGQLMAEHEAIYGSKPSPMKNQSAKKGRRMSCSGATNRRLSVGGTMLQTPKLS
IGGTMPQTPKTEFHSTKATPNTHHTKKSDLFHQRDQFNYSNDDGLPALSAGRKGLDLAGL
PLKKQSNSVNGCEMEKTMTRKPFSPISSTDSSKFNATNILEDLNRKHNHNEMVNKMLPSS
QIPFSTPVKTLYTTEEENRTPLAVATIPVTSTPLTVSAPMQTAVTPIHNALVPYNYSKTV
EEIPVEIEYSFEERRLGFVLPRTQV*

Transcript Sequence

Transcript ID

PGSC0003DMT400079660
Transcript Infomation

pacid=37462769 locus=PGSC0003DMG400031025 ID=PGSC0003DMT400079660.v4.03 annot-version=v4.03
Sequence

ATGACAGCTGCTCAAGGTGATCCAATTCAGCAAATGGAAACTACATGTGGAACATTGCTA
TATGAATTGCAGATTATATGGGATGAAGTTGGGGAATCTGATACTGAAAGGGACAAAATG
CTGTATGAGCTTGAACGAGAATGTTTAGAAGTATATAGAAGAAAAGTGGATCAAGCAAAT
AAGAGTAGAGCTCAATTAAGGCAGGCAATTGCTGATGCTGAAGCAGAGCTTGCAGCTATC
TGTTCTGCGATGGGGGAGCGACCAGTGCATATTAGACAGTCTGATCAGAGCCTTGGAGGT
CTGAAGGCAGAACTTAGAACCATTCTTCCAGAATTGGAAGAGATGCGCAATAGGAAATCT
GATAGAAAGAATCAATTCATTGAAGTTACAAAGCAGTTACAGAAGATTAGGGATGAAATT
TTTAATCCCACTGGTTGTACTTCTACTTCTGTGGTAGTTGATAAAAGTGATTTATCTTTA
AGAAAGCTAGAAGAATTACATGCTGAACTGCAGGCACTTCAAAAGGAGAAGAATGAACGC
TTGAAACAAGTTTTGGACCACCTAAGTACTTTGAACTCACTATGCTTGGTTCTTGGTATG
GATTTCAAACATACTGTCAATGAGGTTCATCCGAGTCTAGGGGAATCTGAAGGAACCAAG
AATATAAGTAATGATACAATCCAACATTTAGCTGCTGCAATAGGAAGACTACGAGAGGTT
AAGTTACTCAGGATGAAACGGCTGCAAGAGCTTGCATCTTCCATGTTGGAACTATGGAAT
TTGATGGACACCCCCATTGAAGAGCAACAGACTTTTCAGAATGTTACTTGTAAGATAGCT
GCCTCAGAACATGAGATAACAGAGCCAAATATCCTGTCAGTGGAATTCATTAACTATGTT
GAGGGAGAATTGTCCCGCTTGGAAGAGTTGAAAGCAAGCAAAATGAAAGAGCTTGTTTTA
AAGAAAAGATCAGAACTAGAAGAGATCTGCAGAAAAACACACATGGTTGCTGATTCAGAT
AATGCAATGGATGTTGCTATTGAAGCTATTGAATCTGGAGCTGTTGATGCTGCTTCTATC
CTCGAGCAAATTGAACTCCAAATAGCACAAGTTAAAGAAGAAGCTTTCAGCAGGAAAGAA
ATATTAGACAAGGTGGAGAAATGGATAGCCGCATGTGAGGAGGAGTGTTGGCTTGAAGAA
TACAACAGGGATGAAAATCGATACAATGCTGGACGAGGTGCCCACCTTACTCTAAAGCGT
GCTGAGAAAGCTCGTACTTTAGTTAATAAGCTTCCAGCAATGGTAGAAGCATTGGCATCA
AAAACAAAAGCATGGGAAAGTGAGAGGGGGATCGATTTCACTTATGATGGAATCCGTCTT
CTTGCTATGCTTGAAGAGTATAACATCTTACGACAAGAAAAGGAGGAAGAACGTAAAAGA
CAACGAGACCAGAAGAAACTTCAGGGACAATTAATGGCAGAACATGAAGCTATCTATGGC
TCAAAGCCCAGCCCTATGAAGAACCAAAGTGCCAAAAAGGGTCGTAGAATGTCATGCAGT
GGTGCAACCAATAGAAGGCTTTCTGTTGGAGGAACAATGCTCCAAACTCCGAAGCTTTCT
ATTGGAGGAACAATGCCTCAAACTCCAAAGACTGAATTCCATTCAACCAAAGCTACACCA
AACACACATCACACAAAGAAATCTGATCTCTTTCATCAAAGAGATCAATTCAATTATTCT
AACGATGATGGATTGCCAGCTCTATCAGCAGGGCGGAAAGGTCTGGATCTTGCTGGACTT
CCTTTGAAAAAGCAGTCCAATTCAGTAAATGGTTGCGAGATGGAGAAAACTATGACACGG
AAGCCTTTCTCCCCCATTTCTTCCACTGATTCATCCAAGTTCAATGCAACTAACATTTTG
GAAGATCTGAATAGAAAGCATAATCATAATGAGATGGTGAATAAGATGCTTCCAAGTAGC
CAAATTCCATTCTCTACTCCAGTGAAGACACTTTATACTACAGAAGAAGAGAACAGAACT
CCTCTCGCAGTGGCAACAATTCCTGTCACTTCTACTCCTTTAACTGTGTCTGCCCCTATG
CAGACGGCTGTAACACCGATTCATAATGCTCTTGTTCCTTACAATTATTCCAAGACAGTT
GAGGAGATTCCTGTAGAGATTGAGTATTCTTTTGAGGAGAGGAGGCTTGGATTTGTTCTT
CCCAGAACACAAGTCTAA