Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079646
CDS Infomation

pacid=37463344 polypeptide=PGSC0003DMP400054023 locus=PGSC0003DMG400031019 ID=PGSC0003DMT400079646.v4.03 annot-version=v4.03
Sequence

ATGGATGTTCTATCTATTCCTACTAGTCTCACAATAATAGCATTTTGTGTCATTTTAGCA
GTAGCAGCATTTGTGTTCAAAGTAATTGTCTTCAACAAGGGAAAGTACCATCCTGTTGCT
GGAACAATCATCGATCATTTGCTGAATTTCAACAGGCTGCATGATTACATGACAGAAATG
GCAAGCAAATACAATACCTATAGGATACTTAATCTTTTCCAAAGTGAGGTTTACACCTCC
GACCCTGTTAATATCGAGTATATTCTAAAGACAAATTTCCCCAACTATGGCAAGGGTTGG
CACCATTACAGCAGATTGAATGATCTTCTCGGTGATGGGATCTTCACAGTCGATGGAGAC
AAGTGGAAAAACCAACGGAAGATATCAAGTTATGAATTCTCCACCAAAAATTTAAGGGAC
TTTAGTAGTGCAGTTTTCAGAATTAGTGCGGTAAAACTTGCTCACAAAGTATCTGAAGCT
GTGACCTCAAATCAAGCAACAGATATTCAAGACTTGTTTACTAAATCAACACTGGAGACG
GTATTCAAGATTTTACTAGGTGTGGATCTAGACACTACAACTGAAGAAGGCATTCTCTTT
TCCAATGCTTTTGATGAAGCTAGTGCAGTAACTCTCTATCGCTACGTTGATGTGTTTTGG
AAAGTGAAAAGATTTCTAAACATTGGGTCAGAAGCAAATATGAAGAAGTGTATTAAAGTG
GTTGATGAATTTGTATATAAAATTATCAGAAACAAGACAGAACAGATGAGCAAGTCGCGA
GATGACAGCAGGGTGATGAAGAAATCAGATATTCTGTCTAGGTTTCTGGAAATGAACAAA
ACGGATCCAAAGTACCTTAAGGACATAATCCTTAGCTTTATAATTGCTGGCAAAGACACT
ACAGCTAGCACACTTTCCTGGTTCTTCTATATGATGTGCAAGCACCCTCTCCTACAAGAA
AAAATTGCAGATGAAGTCAGGAAAGCAACTGGAATAAACCAGAATTCGAGTATTGATGAG
CTAGCTAACAGCATTACTGATGACGCACTGGATAAAATGCAGTATCTCCATGCATCATTA
ACTGAGACGCTCAGATTATATCCTGCAATTCCTGTGGATAGCAAAGTTTGTTTATCAGAT
GACACTTTCCCTGATGGGTTCAAAGTGAGGAAAGGGGACGCTGTCGCATATCAACCATGG
GCTATGGGCAGGATGACATCTTTATGGGGTGATGATGCAGAGGATTTTCGGCCAGAGAGA
TGGATTGATGAAAATTGTTGCTTTCGGCAAGAAAGTCCCTTTAAGTTCACAGCCTTCCAG
GGTGGGCCGAGAATTTGTTTGGGGAAGGAATTTGCTTACAGACAGATGAAGATCTTTTCA
GCAGTGTTGCTGGGCACCTTTAGATTTAAGCTGAGTGATGAAGAAAGAAGAGTTACATAC
AGAACCATGCTCACTCTTCACATTGACGGTGGCCTCCATCTTCATGCTTCCTACAGATTA
CGCCACCACAACCCGCCGGCCCGGAACAATATGCCTGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400054023
PEP Infomation

pacid=37463344 transcript=PGSC0003DMT400079646 locus=PGSC0003DMG400031019 ID=PGSC0003DMT400079646.v4.03 annot-version=v4.03
Sequence

MDVLSIPTSLTIIAFCVILAVAAFVFKVIVFNKGKYHPVAGTIIDHLLNFNRLHDYMTEM
ASKYNTYRILNLFQSEVYTSDPVNIEYILKTNFPNYGKGWHHYSRLNDLLGDGIFTVDGD
KWKNQRKISSYEFSTKNLRDFSSAVFRISAVKLAHKVSEAVTSNQATDIQDLFTKSTLET
VFKILLGVDLDTTTEEGILFSNAFDEASAVTLYRYVDVFWKVKRFLNIGSEANMKKCIKV
VDEFVYKIIRNKTEQMSKSRDDSRVMKKSDILSRFLEMNKTDPKYLKDIILSFIIAGKDT
TASTLSWFFYMMCKHPLLQEKIADEVRKATGINQNSSIDELANSITDDALDKMQYLHASL
TETLRLYPAIPVDSKVCLSDDTFPDGFKVRKGDAVAYQPWAMGRMTSLWGDDAEDFRPER
WIDENCCFRQESPFKFTAFQGGPRICLGKEFAYRQMKIFSAVLLGTFRFKLSDEERRVTY
RTMLTLHIDGGLHLHASYRLRHHNPPARNNMPA*

Transcript Sequence

Transcript ID

PGSC0003DMT400079646
Transcript Infomation

pacid=37463344 locus=PGSC0003DMG400031019 ID=PGSC0003DMT400079646.v4.03 annot-version=v4.03
Sequence

ATGGATGTTCTATCTATTCCTACTAGTCTCACAATAATAGCATTTTGTGTCATTTTAGCA
GTAGCAGCATTTGTGTTCAAAGTAATTGTCTTCAACAAGGGAAAGTACCATCCTGTTGCT
GGAACAATCATCGATCATTTGCTGAATTTCAACAGGCTGCATGATTACATGACAGAAATG
GCAAGCAAATACAATACCTATAGGATACTTAATCTTTTCCAAAGTGAGGTTTACACCTCC
GACCCTGTTAATATCGAGTATATTCTAAAGACAAATTTCCCCAACTATGGCAAGGGTTGG
CACCATTACAGCAGATTGAATGATCTTCTCGGTGATGGGATCTTCACAGTCGATGGAGAC
AAGTGGAAAAACCAACGGAAGATATCAAGTTATGAATTCTCCACCAAAAATTTAAGGGAC
TTTAGTAGTGCAGTTTTCAGAATTAGTGCGGTAAAACTTGCTCACAAAGTATCTGAAGCT
GTGACCTCAAATCAAGCAACAGATATTCAAGACTTGTTTACTAAATCAACACTGGAGACG
GTATTCAAGATTTTACTAGGTGTGGATCTAGACACTACAACTGAAGAAGGCATTCTCTTT
TCCAATGCTTTTGATGAAGCTAGTGCAGTAACTCTCTATCGCTACGTTGATGTGTTTTGG
AAAGTGAAAAGATTTCTAAACATTGGGTCAGAAGCAAATATGAAGAAGTGTATTAAAGTG
GTTGATGAATTTGTATATAAAATTATCAGAAACAAGACAGAACAGATGAGCAAGTCGCGA
GATGACAGCAGGGTGATGAAGAAATCAGATATTCTGTCTAGGTTTCTGGAAATGAACAAA
ACGGATCCAAAGTACCTTAAGGACATAATCCTTAGCTTTATAATTGCTGGCAAAGACACT
ACAGCTAGCACACTTTCCTGGTTCTTCTATATGATGTGCAAGCACCCTCTCCTACAAGAA
AAAATTGCAGATGAAGTCAGGAAAGCAACTGGAATAAACCAGAATTCGAGTATTGATGAG
CTAGCTAACAGCATTACTGATGACGCACTGGATAAAATGCAGTATCTCCATGCATCATTA
ACTGAGACGCTCAGATTATATCCTGCAATTCCTGTGGATAGCAAAGTTTGTTTATCAGAT
GACACTTTCCCTGATGGGTTCAAAGTGAGGAAAGGGGACGCTGTCGCATATCAACCATGG
GCTATGGGCAGGATGACATCTTTATGGGGTGATGATGCAGAGGATTTTCGGCCAGAGAGA
TGGATTGATGAAAATTGTTGCTTTCGGCAAGAAAGTCCCTTTAAGTTCACAGCCTTCCAG
GGTGGGCCGAGAATTTGTTTGGGGAAGGAATTTGCTTACAGACAGATGAAGATCTTTTCA
GCAGTGTTGCTGGGCACCTTTAGATTTAAGCTGAGTGATGAAGAAAGAAGAGTTACATAC
AGAACCATGCTCACTCTTCACATTGACGGTGGCCTCCATCTTCATGCTTCCTACAGATTA
CGCCACCACAACCCGCCGGCCCGGAACAATATGCCTGCTTAA