Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079641
CDS Infomation

pacid=37461846 polypeptide=PGSC0003DMP400054018 locus=PGSC0003DMG400031017 ID=PGSC0003DMT400079641.v4.03 annot-version=v4.03
Sequence

ATGGGATGGTACAGAAGATCAAAAGTTGGTATTGATGCTTTTCGAAGTTTCGCATCAAAG
TTTTCATTCAACAATTCAATTCAACGAACCAATCACTGCAATTCTTTCGTACCAAACGCT
TTAGGCAAACCTAGTCCATCTGGGTCCTCAAGGATTTTGAGAAATTCGTGCTTTCAGTAT
GGAATTAAGCAAATTCAGTACAGTGGCCCCTTTTTCGGTGGGGCTAGAAGATATTACTAC
GTTGATCGACACCAAATTCATCATTTTCGTCCAAGGGGTCCTCATAGGTGGTTTCAGAAT
CCAAGAATTGTTCTTATTGTTGTTTTGGTGGGTTCAGGATTAGTGATAACTGTTTATCTG
GGTAATTTGGAGACTATACCCTATACTAAAAGAACCCATTTTGTGCTTTTGTCTAAAGAT
ATCGAGAAAAGGCTGGGTGAGTCTCAGTTTCAAGAGATGAAAAAGTCATTCAAAGGGAAA
ATATTGCCTGCTATACACCCGGAAAGTGTTAGGGTGAGATTGATAGCTACAGATATAATT
GAAGCTTTACAAAGAGGGTTGCGAAAAGAGCAGGTATGGACTGATCTTCACTACGCATCA
GATGCCGTGGAACCTCATGAGACTAGTGGGCATGAGACTTTGATGGCATTAAGTGATAGT
AACCCCGAGGCAAAGTGGAGTAAAGACGATGAAATTCTAGATGACAGTTGGGTTCAGAAA
AGTAGAAAGAAGGGACAGGAGAAGGGGTCAGAGTCTGCTACCGGGCATATCGAGGGATTG
CAGTGGGAGGTTTTGGTTGTAAATGATCCTGTTGTAAATGCCTTCTGTTTGCCTGGTGGG
AAGATTGTAGTTTTCACAGGTTTGCTCGAACATTTTAGGACGGATGCTGAAATTGCAACC
ATCATTGGGCATGAGGTTGGGCATGCTGTGGCTCGCCATGCTGCTGAGGGAATTACAAAA
AAATTGTGGTTTGCTATCATTCAATTGGTTCTTTATCAATTTGTGATGCCTGATGTTGTT
AACACCATGTCAGCCCTGTTCCTAAGGCTTCCATTTTCACGCAGGATGGAGATGGAAGCA
GATTACATAGGGCTGCTGTTGATGGCTTCTGCTGGCTATAACCCTCGAATAGCTCCCTCA
GTCTATGAGAAGCTGGGAAAAATTTCTGGTGAATCAGCCTTGAGAGATTATCTGTCTACC
CATCCTTCTGGGAAGAAGAGAGCGCAGTTGTTGGCTCAGGCTAAAGTAATGGATGAAGCC
CTTGCGATATACAGGGAAGTGCAGGCAGGAAAGGGGATTGAGGGTTTCCTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400054018
PEP Infomation

pacid=37461846 transcript=PGSC0003DMT400079641 locus=PGSC0003DMG400031017 ID=PGSC0003DMT400079641.v4.03 annot-version=v4.03
Sequence

MGWYRRSKVGIDAFRSFASKFSFNNSIQRTNHCNSFVPNALGKPSPSGSSRILRNSCFQY
GIKQIQYSGPFFGGARRYYYVDRHQIHHFRPRGPHRWFQNPRIVLIVVLVGSGLVITVYL
GNLETIPYTKRTHFVLLSKDIEKRLGESQFQEMKKSFKGKILPAIHPESVRVRLIATDII
EALQRGLRKEQVWTDLHYASDAVEPHETSGHETLMALSDSNPEAKWSKDDEILDDSWVQK
SRKKGQEKGSESATGHIEGLQWEVLVVNDPVVNAFCLPGGKIVVFTGLLEHFRTDAEIAT
IIGHEVGHAVARHAAEGITKKLWFAIIQLVLYQFVMPDVVNTMSALFLRLPFSRRMEMEA
DYIGLLLMASAGYNPRIAPSVYEKLGKISGESALRDYLSTHPSGKKRAQLLAQAKVMDEA
LAIYREVQAGKGIEGFL*

Transcript Sequence

Transcript ID

PGSC0003DMT400079641
Transcript Infomation

pacid=37461846 locus=PGSC0003DMG400031017 ID=PGSC0003DMT400079641.v4.03 annot-version=v4.03
Sequence

ATGGGATGGTACAGAAGATCAAAAGTTGGTATTGATGCTTTTCGAAGTTTCGCATCAAAG
TTTTCATTCAACAATTCAATTCAACGAACCAATCACTGCAATTCTTTCGTACCAAACGCT
TTAGGCAAACCTAGTCCATCTGGGTCCTCAAGGATTTTGAGAAATTCGTGCTTTCAGTAT
GGAATTAAGCAAATTCAGTACAGTGGCCCCTTTTTCGGTGGGGCTAGAAGATATTACTAC
GTTGATCGACACCAAATTCATCATTTTCGTCCAAGGGGTCCTCATAGGTGGTTTCAGAAT
CCAAGAATTGTTCTTATTGTTGTTTTGGTGGGTTCAGGATTAGTGATAACTGTTTATCTG
GGTAATTTGGAGACTATACCCTATACTAAAAGAACCCATTTTGTGCTTTTGTCTAAAGAT
ATCGAGAAAAGGCTGGGTGAGTCTCAGTTTCAAGAGATGAAAAAGTCATTCAAAGGGAAA
ATATTGCCTGCTATACACCCGGAAAGTGTTAGGGTGAGATTGATAGCTACAGATATAATT
GAAGCTTTACAAAGAGGGTTGCGAAAAGAGCAGGTATGGACTGATCTTCACTACGCATCA
GATGCCGTGGAACCTCATGAGACTAGTGGGCATGAGACTTTGATGGCATTAAGTGATAGT
AACCCCGAGGCAAAGTGGAGTAAAGACGATGAAATTCTAGATGACAGTTGGGTTCAGAAA
AGTAGAAAGAAGGGACAGGAGAAGGGGTCAGAGTCTGCTACCGGGCATATCGAGGGATTG
CAGTGGGAGGTTTTGGTTGTAAATGATCCTGTTGTAAATGCCTTCTGTTTGCCTGGTGGG
AAGATTGTAGTTTTCACAGGTTTGCTCGAACATTTTAGGACGGATGCTGAAATTGCAACC
ATCATTGGGCATGAGGTTGGGCATGCTGTGGCTCGCCATGCTGCTGAGGGAATTACAAAA
AAATTGTGGTTTGCTATCATTCAATTGGTTCTTTATCAATTTGTGATGCCTGATGTTGTT
AACACCATGTCAGCCCTGTTCCTAAGGCTTCCATTTTCACGCAGGATGGAGATGGAAGCA
GATTACATAGGGCTGCTGTTGATGGCTTCTGCTGGCTATAACCCTCGAATAGCTCCCTCA
GTCTATGAGAAGCTGGGAAAAATTTCTGGTGAATCAGCCTTGAGAGATTATCTGTCTACC
CATCCTTCTGGGAAGAAGAGAGCGCAGTTGTTGGCTCAGGCTAAAGTAATGGATGAAGCC
CTTGCGATATACAGGGAAGTGCAGGCAGGAAAGGGGATTGAGGGTTTCCTATAG