Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079602
CDS Infomation

pacid=37442005 polypeptide=PGSC0003DMP400053988 locus=PGSC0003DMG400030995 ID=PGSC0003DMT400079602.v4.03 annot-version=v4.03
Sequence

ATGCACACTAAAATTCTTCTTCCTTCTTGCATCTTACTACTTTTGTTCTCACTACCATCC
TTCAATGTTGTTGTAGCTGGAGATGGTGAATCTGGTAACCCATTTACACCCAAAGGTTAT
CTGATTAGGTACTGGAAGAAACAAATCTCAAATGAGTTACCAAAGCCATGGTTCCTTCTC
AACAAGGCATCTCCATTGAATGCTGCACAATATGCAACTTATACTAAACTTGTTGCTGAT
CAAAATGCACTCACCACACAACTCCACACCTTCTGCTCTTCAGCAAATCTCATGTGTGCA
CCAGATCTGTCACCAAGTCTTGAAAAACACAGTGGAGAAATCCATTTTGCGACTTACAGT
GACAAAAACTTCACCAATTATGGAACCAATGAACCTGGAATTGGAGTTAACACTTTCAAG
AACTACTCTGATGGAGAAAACATCCCTGTAAATTCTTTCAGGCGATACGGTAGAGGTTCT
CCCCGTGATAATAAATTTGACAATTATGCCCCTGATGGCAATGTAATTGACCAAAGTTTC
AATTCCTATAGCACAAGCACTGCAGGGGGTTCTGGCGAATTCACAAATTACGCGGCGAAT
ACCAATGTCCCCAATCTGCATTTCACTTCCTATTCCGACCAAGGAACAGGAGGTGAACAA
AAATTCACAACATACTCACAACAAGCAAATGCCGGTGACCAATATTTCAAGAGCTACGGC
AAAAATGGGAATGGTGCTAATGGTGAATTCGTCAGCTATGGAAATGACACGAATGTTCTT
GGCTCAACATTTACAAATTATGGTCAGACAGCAAATGGAGAAGACCAGAAGTTCACATCT
TATGGTTTCAACGGCAATGTTCCTGAAAATCATTTCACGAACTATGGCGTTGGAGGTAAT
GGTCCATCTGAAACTTTTACTAGCTACAGAGATCAATCGAATGTTGGAGATGACACGTTC
ACTACCTATGTTAAGGATGCAAATGGCGGTGAAGCCAATTTCACCAACTATGGTCAATCA
TTCAATGAAGGTACTGATGTATTCACTACTTACGGCAAAGGGGGTAATGACCCACATATT
AATTTCAAAACTTATGGAGTTAACAACACTTTCAAAGATTATGTCAAAGATACTGCCACA
TTTTCCAATTACCACAACAAAACTTCCCAAGTTTTAGCGTCGTTGACCGAGGTCAACGGT
GGTAAAAAGGTGAATAACCGGTGGGTTGAGCCCGGAAAGTTTTTCCGGGAGAAGATGTTG
AAGAGTGGTACAATCATGCCTATGCCAGATATTAAGGATAAGATGCCTAAAAGGTCCTTT
TTGCCCCGGGTGATTGCTGCTAAATTACCCTTTTCTACTTCAAAAATTGCTGAGCTGAAG
AAAATCTTCCACGCCGGAGATGATTCTCAGGTGGAGAAGATGATCGGCGATGCATTGAGC
GAATGTGAAAGAGCACCGAGCGCCGGTGAGACGAAACAATGTGTTAACTCAGCTGAAGAT
ATGATTGATTTCGCAACATCAGTGTTGGGTCGAAACGTCGTGGTTCGAACAACTGAGAAT
ACAAAAGGGTCAAATGGGAATATCATGATAGGATCAGTCAAAGGAATCAACGGTGGAAAA
GTTACCAAATCAGTATCTTGTCATCAGACGTTGTACCCTTACTTACTGTATTACTGTCAT
TCGGTTCCTAAAGTCCGGGTCTACGAAGCGGATATTCTAGACCCGAATTCAAAGGCTAAG
ATCAATCATGGTGTTGCGATATGCCACGTGGATACTTCTTCATGGGGACCGACTCACGGA
GCGTTCGTTGCACTCGGGTCAGGGCCCGGGAAAATTGAGGTTTGTCATTGGATCTTTGAG
AATGATATGACTTGGGCAATTGCTGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400053988
PEP Infomation

pacid=37442005 transcript=PGSC0003DMT400079602 locus=PGSC0003DMG400030995 ID=PGSC0003DMT400079602.v4.03 annot-version=v4.03
Sequence

MHTKILLPSCILLLLFSLPSFNVVVAGDGESGNPFTPKGYLIRYWKKQISNELPKPWFLL
NKASPLNAAQYATYTKLVADQNALTTQLHTFCSSANLMCAPDLSPSLEKHSGEIHFATYS
DKNFTNYGTNEPGIGVNTFKNYSDGENIPVNSFRRYGRGSPRDNKFDNYAPDGNVIDQSF
NSYSTSTAGGSGEFTNYAANTNVPNLHFTSYSDQGTGGEQKFTTYSQQANAGDQYFKSYG
KNGNGANGEFVSYGNDTNVLGSTFTNYGQTANGEDQKFTSYGFNGNVPENHFTNYGVGGN
GPSETFTSYRDQSNVGDDTFTTYVKDANGGEANFTNYGQSFNEGTDVFTTYGKGGNDPHI
NFKTYGVNNTFKDYVKDTATFSNYHNKTSQVLASLTEVNGGKKVNNRWVEPGKFFREKML
KSGTIMPMPDIKDKMPKRSFLPRVIAAKLPFSTSKIAELKKIFHAGDDSQVEKMIGDALS
ECERAPSAGETKQCVNSAEDMIDFATSVLGRNVVVRTTENTKGSNGNIMIGSVKGINGGK
VTKSVSCHQTLYPYLLYYCHSVPKVRVYEADILDPNSKAKINHGVAICHVDTSSWGPTHG
AFVALGSGPGKIEVCHWIFENDMTWAIAD*

Transcript Sequence

Transcript ID

PGSC0003DMT400079602
Transcript Infomation

pacid=37442005 locus=PGSC0003DMG400030995 ID=PGSC0003DMT400079602.v4.03 annot-version=v4.03
Sequence

ATGCACACTAAAATTCTTCTTCCTTCTTGCATCTTACTACTTTTGTTCTCACTACCATCC
TTCAATGTTGTTGTAGCTGGAGATGGTGAATCTGGTAACCCATTTACACCCAAAGGTTAT
CTGATTAGGTACTGGAAGAAACAAATCTCAAATGAGTTACCAAAGCCATGGTTCCTTCTC
AACAAGGCATCTCCATTGAATGCTGCACAATATGCAACTTATACTAAACTTGTTGCTGAT
CAAAATGCACTCACCACACAACTCCACACCTTCTGCTCTTCAGCAAATCTCATGTGTGCA
CCAGATCTGTCACCAAGTCTTGAAAAACACAGTGGAGAAATCCATTTTGCGACTTACAGT
GACAAAAACTTCACCAATTATGGAACCAATGAACCTGGAATTGGAGTTAACACTTTCAAG
AACTACTCTGATGGAGAAAACATCCCTGTAAATTCTTTCAGGCGATACGGTAGAGGTTCT
CCCCGTGATAATAAATTTGACAATTATGCCCCTGATGGCAATGTAATTGACCAAAGTTTC
AATTCCTATAGCACAAGCACTGCAGGGGGTTCTGGCGAATTCACAAATTACGCGGCGAAT
ACCAATGTCCCCAATCTGCATTTCACTTCCTATTCCGACCAAGGAACAGGAGGTGAACAA
AAATTCACAACATACTCACAACAAGCAAATGCCGGTGACCAATATTTCAAGAGCTACGGC
AAAAATGGGAATGGTGCTAATGGTGAATTCGTCAGCTATGGAAATGACACGAATGTTCTT
GGCTCAACATTTACAAATTATGGTCAGACAGCAAATGGAGAAGACCAGAAGTTCACATCT
TATGGTTTCAACGGCAATGTTCCTGAAAATCATTTCACGAACTATGGCGTTGGAGGTAAT
GGTCCATCTGAAACTTTTACTAGCTACAGAGATCAATCGAATGTTGGAGATGACACGTTC
ACTACCTATGTTAAGGATGCAAATGGCGGTGAAGCCAATTTCACCAACTATGGTCAATCA
TTCAATGAAGGTACTGATGTATTCACTACTTACGGCAAAGGGGGTAATGACCCACATATT
AATTTCAAAACTTATGGAGTTAACAACACTTTCAAAGATTATGTCAAAGATACTGCCACA
TTTTCCAATTACCACAACAAAACTTCCCAAGTTTTAGCGTCGTTGACCGAGGTCAACGGT
GGTAAAAAGGTGAATAACCGGTGGGTTGAGCCCGGAAAGTTTTTCCGGGAGAAGATGTTG
AAGAGTGGTACAATCATGCCTATGCCAGATATTAAGGATAAGATGCCTAAAAGGTCCTTT
TTGCCCCGGGTGATTGCTGCTAAATTACCCTTTTCTACTTCAAAAATTGCTGAGCTGAAG
AAAATCTTCCACGCCGGAGATGATTCTCAGGTGGAGAAGATGATCGGCGATGCATTGAGC
GAATGTGAAAGAGCACCGAGCGCCGGTGAGACGAAACAATGTGTTAACTCAGCTGAAGAT
ATGATTGATTTCGCAACATCAGTGTTGGGTCGAAACGTCGTGGTTCGAACAACTGAGAAT
ACAAAAGGGTCAAATGGGAATATCATGATAGGATCAGTCAAAGGAATCAACGGTGGAAAA
GTTACCAAATCAGTATCTTGTCATCAGACGTTGTACCCTTACTTACTGTATTACTGTCAT
TCGGTTCCTAAAGTCCGGGTCTACGAAGCGGATATTCTAGACCCGAATTCAAAGGCTAAG
ATCAATCATGGTGTTGCGATATGCCACGTGGATACTTCTTCATGGGGACCGACTCACGGA
GCGTTCGTTGCACTCGGGTCAGGGCCCGGGAAAATTGAGGTTTGTCATTGGATCTTTGAG
AATGATATGACTTGGGCAATTGCTGATTGA