Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079598
CDS Infomation

pacid=37443725 polypeptide=PGSC0003DMP400053985 locus=PGSC0003DMG400030993 ID=PGSC0003DMT400079598.v4.03 annot-version=v4.03
Sequence

ATGGCAGCATTAGCACCTGGGATTTTGTTGAAGTTGCTAAATGGGATGAAATCAGGGGTG
AAGCCTACAAGTGAACATAGGAGTTCACTTTTGCAGGTTACTGATATTGTTCCTGCAGAT
CTTGATGAGAAGAATTTATGGCCAAAGCATGGATTTTTCATCAAGGTATCGGATTCTTCG
CATTCCATTTATGTAAGTCTTCCAGATGAGCAAGATGATTTGGTTTTAAGCAATAAAATG
CAGCTAGGACAGTTCATTTATGTTGATAGATTAGAGCCCGGTTCGCCTGTTCCTGTTGTT
AAAGGTGCTAAGCCTCTTCCTGGGAGGCACCCACTTGTGGGAACTCCAGAACCATTAATG
GGGTTGAGAGAAAAAGGCGAGAAAGTTGAACGAAAATTCAATCAGAGTCAGTCAGCTCCA
AGAAGGGGTTCTTGGGGAATAGGCCAAAATGGGGTAGAAGTTGTTGCTTCATCTCCTCAT
GTATTGAAGCCAGTTCCTATTGATTTCGATCAATGTACACCGATAAAAGAGAAGTCTAGT
GCCGTCAAATTTGCGCGAATTATTCCAATGTCACCTCTTATTAGGGGAAAATTCTTCAAA
GATGGAGGAGCTAATGGTGGGATGGTAAGGTCATCAGCCGGTGGCGCGTTGTTGTCTAAA
TTGATGGAGGCTAAAGGGGAAAGTCCTTCTATGGTGAGAAAAAGTTGTGCTACCCCTAGC
ATGATGAAATTTCCAAGGAGCAGAAGTGTAACAGATCGTGATCGAGAACAAAGAATTGTC
AATTCACCTTTAAACTCAGCTACACAGGAGAAGAAAAGTTCAACCCCACCTCCTAGTTTA
CGGAGTGCACGAATGGCAGCTTCACCAACAGTAGGCAGAGATTCTCAAAGACTTCCCAAT
TCGAAAAAGTTGTCTCAAGAACAACAATCTCAGCCTATTGATTCTTTACCTCATGACAAC
ACTAGTCTGACTGTTAATCTGCCTGGAAAACTTAGTATGTTGGGAAAGGAAGCTGTACAA
CAAAGGGAAAATGCACAGAAAATTGCTCTTCAAGCACTAAGGGATGCATCAGCTACAGAA
AATCTCGTGCGGTCTCTAAAGGTGTTTTCGAACTTGAGTAGAGCTGCGAAACCTGATGCA
CCAACAGCTTGTTTTGATCAATTTCTTGAGTTTCATGAACAACTTGTGCAAGCTGTGGCA
GAAATGGTATCCATTCAAGCAGCAACAGCTTCAAACGAAACGTCACAAACTCCAAAAGCT
GAACAAGAGAATGGTGGTGCCCCTATTCTACACGAAATAGTGCAGAATTCACTGGAAGAA
TCGCGAGACAGTGAATCAAATGCATCGAAGAGGAGAGCTGCACTTTACAAATCCATTGCA
GTCTTTCCTGAAAGGAGTGATCAAAAGTCAATTCTTGGAAAGCATTTGAGATCAACATCA
AAGGCAATAAAAGGAGTATTAAATACTAGCATCAATGAGAATGACGAGAACAAGAAACCG
GTTTCTTCTTCGATAAGCAGCAGCATTTCCAATACAATCAAATTGGGAAAGCAGATTGAG
AGTGAGTCAGGAAGTTGGTTTATGGATTTTCTTGAAAAGGCACTGGAGAAAGGGCTGAAA
AAGGCTAAAGGAAAAGCAGCATCAGATTCTTCAAGCAAAGTACCTCAATCACTCTTGCTT
AAAGTGATCAATTGGGTAGAGGTGGAACAGTTTGATTCAAATAAACGCGCTATTCATCCT
AAAGCAGGACAAATCGCCAGAAAGTTGAGGATCAAGGTCAAGAATCCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400053985
PEP Infomation

pacid=37443725 transcript=PGSC0003DMT400079598 locus=PGSC0003DMG400030993 ID=PGSC0003DMT400079598.v4.03 annot-version=v4.03
Sequence

MAALAPGILLKLLNGMKSGVKPTSEHRSSLLQVTDIVPADLDEKNLWPKHGFFIKVSDSS
HSIYVSLPDEQDDLVLSNKMQLGQFIYVDRLEPGSPVPVVKGAKPLPGRHPLVGTPEPLM
GLREKGEKVERKFNQSQSAPRRGSWGIGQNGVEVVASSPHVLKPVPIDFDQCTPIKEKSS
AVKFARIIPMSPLIRGKFFKDGGANGGMVRSSAGGALLSKLMEAKGESPSMVRKSCATPS
MMKFPRSRSVTDRDREQRIVNSPLNSATQEKKSSTPPPSLRSARMAASPTVGRDSQRLPN
SKKLSQEQQSQPIDSLPHDNTSLTVNLPGKLSMLGKEAVQQRENAQKIALQALRDASATE
NLVRSLKVFSNLSRAAKPDAPTACFDQFLEFHEQLVQAVAEMVSIQAATASNETSQTPKA
EQENGGAPILHEIVQNSLEESRDSESNASKRRAALYKSIAVFPERSDQKSILGKHLRSTS
KAIKGVLNTSINENDENKKPVSSSISSSISNTIKLGKQIESESGSWFMDFLEKALEKGLK
KAKGKAASDSSSKVPQSLLLKVINWVEVEQFDSNKRAIHPKAGQIARKLRIKVKNP*

Transcript Sequence

Transcript ID

PGSC0003DMT400079598
Transcript Infomation

pacid=37443725 locus=PGSC0003DMG400030993 ID=PGSC0003DMT400079598.v4.03 annot-version=v4.03
Sequence

ATGGCAGCATTAGCACCTGGGATTTTGTTGAAGTTGCTAAATGGGATGAAATCAGGGGTG
AAGCCTACAAGTGAACATAGGAGTTCACTTTTGCAGGTTACTGATATTGTTCCTGCAGAT
CTTGATGAGAAGAATTTATGGCCAAAGCATGGATTTTTCATCAAGGTATCGGATTCTTCG
CATTCCATTTATGTAAGTCTTCCAGATGAGCAAGATGATTTGGTTTTAAGCAATAAAATG
CAGCTAGGACAGTTCATTTATGTTGATAGATTAGAGCCCGGTTCGCCTGTTCCTGTTGTT
AAAGGTGCTAAGCCTCTTCCTGGGAGGCACCCACTTGTGGGAACTCCAGAACCATTAATG
GGGTTGAGAGAAAAAGGCGAGAAAGTTGAACGAAAATTCAATCAGAGTCAGTCAGCTCCA
AGAAGGGGTTCTTGGGGAATAGGCCAAAATGGGGTAGAAGTTGTTGCTTCATCTCCTCAT
GTATTGAAGCCAGTTCCTATTGATTTCGATCAATGTACACCGATAAAAGAGAAGTCTAGT
GCCGTCAAATTTGCGCGAATTATTCCAATGTCACCTCTTATTAGGGGAAAATTCTTCAAA
GATGGAGGAGCTAATGGTGGGATGGTAAGGTCATCAGCCGGTGGCGCGTTGTTGTCTAAA
TTGATGGAGGCTAAAGGGGAAAGTCCTTCTATGGTGAGAAAAAGTTGTGCTACCCCTAGC
ATGATGAAATTTCCAAGGAGCAGAAGTGTAACAGATCGTGATCGAGAACAAAGAATTGTC
AATTCACCTTTAAACTCAGCTACACAGGAGAAGAAAAGTTCAACCCCACCTCCTAGTTTA
CGGAGTGCACGAATGGCAGCTTCACCAACAGTAGGCAGAGATTCTCAAAGACTTCCCAAT
TCGAAAAAGTTGTCTCAAGAACAACAATCTCAGCCTATTGATTCTTTACCTCATGACAAC
ACTAGTCTGACTGTTAATCTGCCTGGAAAACTTAGTATGTTGGGAAAGGAAGCTGTACAA
CAAAGGGAAAATGCACAGAAAATTGCTCTTCAAGCACTAAGGGATGCATCAGCTACAGAA
AATCTCGTGCGGTCTCTAAAGGTGTTTTCGAACTTGAGTAGAGCTGCGAAACCTGATGCA
CCAACAGCTTGTTTTGATCAATTTCTTGAGTTTCATGAACAACTTGTGCAAGCTGTGGCA
GAAATGGTATCCATTCAAGCAGCAACAGCTTCAAACGAAACGTCACAAACTCCAAAAGCT
GAACAAGAGAATGGTGGTGCCCCTATTCTACACGAAATAGTGCAGAATTCACTGGAAGAA
TCGCGAGACAGTGAATCAAATGCATCGAAGAGGAGAGCTGCACTTTACAAATCCATTGCA
GTCTTTCCTGAAAGGAGTGATCAAAAGTCAATTCTTGGAAAGCATTTGAGATCAACATCA
AAGGCAATAAAAGGAGTATTAAATACTAGCATCAATGAGAATGACGAGAACAAGAAACCG
GTTTCTTCTTCGATAAGCAGCAGCATTTCCAATACAATCAAATTGGGAAAGCAGATTGAG
AGTGAGTCAGGAAGTTGGTTTATGGATTTTCTTGAAAAGGCACTGGAGAAAGGGCTGAAA
AAGGCTAAAGGAAAAGCAGCATCAGATTCTTCAAGCAAAGTACCTCAATCACTCTTGCTT
AAAGTGATCAATTGGGTAGAGGTGGAACAGTTTGATTCAAATAAACGCGCTATTCATCCT
AAAGCAGGACAAATCGCCAGAAAGTTGAGGATCAAGGTCAAGAATCCCTGA