Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079565
CDS Infomation

pacid=37442630 polypeptide=PGSC0003DMP400053961 locus=PGSC0003DMG400030982 ID=PGSC0003DMT400079565.v4.03 annot-version=v4.03
Sequence

ATGCAGGTTGTTGTGGCTAAAGATGGAGACAAATCTGGTAACCCATTTACACCAAAAGGT
TATCTGATTAGATACTGGAATAAACATGTCTCAAATGACTTACCAAAGCCATGGTTCCTT
CTCAACAAGGCATCTCCATTGAGTGCTGCTCAATATGCAGCTTACACTAAACTTGTTGCT
GATCAAAATGCACTCACCACACACCTCCAATCCTTTTGCTCTTCAGCAAATCTCATGTGT
GCACCAGATTTGTCACCAAGTCTTGAAAAACACAAAGGAGATGTCCATTTTGTCTCTTAC
GGTGACAAGAACTTTACCAATTACGGTACCAAGGAATTCGGTCTCGGATTCAACTCCTTC
AAGAACTATACAGAGGATGAAAATTTCCCTGTGAATTCTTTCAGGCGCTACGGTAGAGAT
TCTCCTCATGATAATCAATTTGACAACTACGGCCCTGGTGGCAATACGCCTGTCCAAAGT
TTCAACAGCTATAGCACAAATACTCCAGGGGGTTCTGGTCAATTCACCAATTACGCCCCG
GGGGCCAATGTCCCCGATTTGCATTTCACTTCCTATTCCGACCACGGAACAGGAGGGGAA
CAACAATTCAAATCCTATGGAAACGATGGAAATGCTGGTCAACAAACTTTCAAAAGCTAT
GGCAAAGATGGAAATGGAGCTGATAGTCAATTCACCACCTATGGAAACAACACTAATGTT
GATGGCTCAGCATTTACAAACTATGGTCAGACAGCAAATGGGGAGAACCAAAATTTCACA
TCTTATGGTTTCAACGGCAATAATCCAGCAAGCAATTTCAACAACTATGGTGTTGGAGGT
AATGGTCCATCCGAGACTTTTACCAGCTATAGAGATCAATCAAATGTTGGAGATGACACG
TTCACTACCTATGTTAAGGATGCAAATGGCGGTGAAGCCAATTTCACCAACTATGGTCAA
TCATTCAATGAAGATACTGCCACATTTTCCAACTACCAAAACAAAACCTCCCAAGTTTTG
GCTTCATTGACCGGTGGCAAAAAGGTGAATAACCGGTGGGTTGAGCCCGGAAAGTTTTTC
AGGGAGAAGATGTTGAAGAGTGGTACAATCATGCCTATGCCAGATATTAAGGATAAGATG
CCTAAAAGGTCCTTTTTGCCTCGGGTGATTGCTTCGAAATTGCCTTTTTCTACCTCAAAG
ATTGATGAGCTGAAGAAAATTTTCCATGCCGCCAATGATTCTCAGGTGGCAAAGATGATC
GGCGATGCTCTCAGTGAGTGTGAAAGAGCACCGAGTGCTGGCGAGACAAAACGATGTGCT
AACTCAGCTGAAGATATGATTGATTTCGCAACATCAGTGTTGGGCGGAAATGTGGTGGTT
CGAACAACTGAGAATACAAAAGGATCAAAGGGGAATATCATGATAGGAGCAGTCAAAGGA
ATCAACGGTGGAAAAGTTACAAAATCAGTATCATGTCACCAGACCTTGTTCCCTTACTTA
CTGTATTACTGTCATTCGGTTCCTAAAGTCCGGGTCTATGAAGCGGATATTTTGGACCCG
AATTCAAAGGCTAAGATCAATCACGGTGTTGCCATTTGCCACGTGGATACTTCTTTATGG
GGACCCAAGCACGGAGCCTTCATTGCACTCGGGTCAGGACCCGGGAAAATAGAGGTTTGT
CACTGGATCTTTGAGAATGACATGACTTGGGCAACTGCTGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400053961
PEP Infomation

pacid=37442630 transcript=PGSC0003DMT400079565 locus=PGSC0003DMG400030982 ID=PGSC0003DMT400079565.v4.03 annot-version=v4.03
Sequence

MQVVVAKDGDKSGNPFTPKGYLIRYWNKHVSNDLPKPWFLLNKASPLSAAQYAAYTKLVA
DQNALTTHLQSFCSSANLMCAPDLSPSLEKHKGDVHFVSYGDKNFTNYGTKEFGLGFNSF
KNYTEDENFPVNSFRRYGRDSPHDNQFDNYGPGGNTPVQSFNSYSTNTPGGSGQFTNYAP
GANVPDLHFTSYSDHGTGGEQQFKSYGNDGNAGQQTFKSYGKDGNGADSQFTTYGNNTNV
DGSAFTNYGQTANGENQNFTSYGFNGNNPASNFNNYGVGGNGPSETFTSYRDQSNVGDDT
FTTYVKDANGGEANFTNYGQSFNEDTATFSNYQNKTSQVLASLTGGKKVNNRWVEPGKFF
REKMLKSGTIMPMPDIKDKMPKRSFLPRVIASKLPFSTSKIDELKKIFHAANDSQVAKMI
GDALSECERAPSAGETKRCANSAEDMIDFATSVLGGNVVVRTTENTKGSKGNIMIGAVKG
INGGKVTKSVSCHQTLFPYLLYYCHSVPKVRVYEADILDPNSKAKINHGVAICHVDTSLW
GPKHGAFIALGSGPGKIEVCHWIFENDMTWATAD*

Transcript Sequence

Transcript ID

PGSC0003DMT400079565
Transcript Infomation

pacid=37442630 locus=PGSC0003DMG400030982 ID=PGSC0003DMT400079565.v4.03 annot-version=v4.03
Sequence

ATGCAGGTTGTTGTGGCTAAAGATGGAGACAAATCTGGTAACCCATTTACACCAAAAGGT
TATCTGATTAGATACTGGAATAAACATGTCTCAAATGACTTACCAAAGCCATGGTTCCTT
CTCAACAAGGCATCTCCATTGAGTGCTGCTCAATATGCAGCTTACACTAAACTTGTTGCT
GATCAAAATGCACTCACCACACACCTCCAATCCTTTTGCTCTTCAGCAAATCTCATGTGT
GCACCAGATTTGTCACCAAGTCTTGAAAAACACAAAGGAGATGTCCATTTTGTCTCTTAC
GGTGACAAGAACTTTACCAATTACGGTACCAAGGAATTCGGTCTCGGATTCAACTCCTTC
AAGAACTATACAGAGGATGAAAATTTCCCTGTGAATTCTTTCAGGCGCTACGGTAGAGAT
TCTCCTCATGATAATCAATTTGACAACTACGGCCCTGGTGGCAATACGCCTGTCCAAAGT
TTCAACAGCTATAGCACAAATACTCCAGGGGGTTCTGGTCAATTCACCAATTACGCCCCG
GGGGCCAATGTCCCCGATTTGCATTTCACTTCCTATTCCGACCACGGAACAGGAGGGGAA
CAACAATTCAAATCCTATGGAAACGATGGAAATGCTGGTCAACAAACTTTCAAAAGCTAT
GGCAAAGATGGAAATGGAGCTGATAGTCAATTCACCACCTATGGAAACAACACTAATGTT
GATGGCTCAGCATTTACAAACTATGGTCAGACAGCAAATGGGGAGAACCAAAATTTCACA
TCTTATGGTTTCAACGGCAATAATCCAGCAAGCAATTTCAACAACTATGGTGTTGGAGGT
AATGGTCCATCCGAGACTTTTACCAGCTATAGAGATCAATCAAATGTTGGAGATGACACG
TTCACTACCTATGTTAAGGATGCAAATGGCGGTGAAGCCAATTTCACCAACTATGGTCAA
TCATTCAATGAAGATACTGCCACATTTTCCAACTACCAAAACAAAACCTCCCAAGTTTTG
GCTTCATTGACCGGTGGCAAAAAGGTGAATAACCGGTGGGTTGAGCCCGGAAAGTTTTTC
AGGGAGAAGATGTTGAAGAGTGGTACAATCATGCCTATGCCAGATATTAAGGATAAGATG
CCTAAAAGGTCCTTTTTGCCTCGGGTGATTGCTTCGAAATTGCCTTTTTCTACCTCAAAG
ATTGATGAGCTGAAGAAAATTTTCCATGCCGCCAATGATTCTCAGGTGGCAAAGATGATC
GGCGATGCTCTCAGTGAGTGTGAAAGAGCACCGAGTGCTGGCGAGACAAAACGATGTGCT
AACTCAGCTGAAGATATGATTGATTTCGCAACATCAGTGTTGGGCGGAAATGTGGTGGTT
CGAACAACTGAGAATACAAAAGGATCAAAGGGGAATATCATGATAGGAGCAGTCAAAGGA
ATCAACGGTGGAAAAGTTACAAAATCAGTATCATGTCACCAGACCTTGTTCCCTTACTTA
CTGTATTACTGTCATTCGGTTCCTAAAGTCCGGGTCTATGAAGCGGATATTTTGGACCCG
AATTCAAAGGCTAAGATCAATCACGGTGTTGCCATTTGCCACGTGGATACTTCTTTATGG
GGACCCAAGCACGGAGCCTTCATTGCACTCGGGTCAGGACCCGGGAAAATAGAGGTTTGT
CACTGGATCTTTGAGAATGACATGACTTGGGCAACTGCTGATTGA