Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079564
CDS Infomation

pacid=37443616 polypeptide=PGSC0003DMP400053960 locus=PGSC0003DMG400030981 ID=PGSC0003DMT400079564.v4.03 annot-version=v4.03
Sequence

ATGTGCGCACCAGATTTGTCACCAAGTCTCGAAAAACACACAGGAGATATCCACTTTGCC
TCTTACGGCAACAAAAACTTCACCAATTACGGAACCAAAGAAGCTGGAATCGGAGTGAAC
TCCTTCAAAAACTATACTGAGGAAGAAAATTTCCCTATGAATTCTTTCAGGCGTTACGGT
AGAGATTCTCCCCGTGATAATCAATTTGACAACTACGGCCCTGATGGCAATACAGCTGTC
CAAAGTTTCAACAGCTATAGCACAAATACTCCAGGGGGTTCTGGCAAATTCAATAATTAC
GGCCCAAATAGCAATGATGCCAACATGGGGTTCAATTCCTATGCTGACAATGGAGCTGGT
TCGGTCCAAAAATTCACAAATTATGCCCCAATTCGGTCTAATATCCCTAATATACACTTC
ACTTCCTATTCCGACCACGGAACGGGTGGGGAACAAGAATTCAAATCCTACTCAGACGAT
GCAAATGAAGCTAATCAATCTTTCATAAACTATGGCAAAGATGGGAATGGTGCTAATAGT
AAATTCAACAGCTATGGAAACAAAGGCAGTAGTATAAACAAATTCAAAAACTATGGCGTT
GAAGGTAATGGTATATCTGAGACTTTTACTAACTACAGAGAACAATCAAGTTTTGGTAAT
GACAGGTTCACTAACTATGTTAAGGACGCAAATGGCGGTGAAGCAAATTTCACCAACTAT
GGTCAATCTACCGATGAACTTGATCCTGGTACTGATGAATTCACTACCTATGGCAAAGGA
GGTAATGACCCACATATTAATTTCAAGTCTTACGGAGGTGACAAACTCTTCAAAGGTTAT
GTCAAAGACACTGCCACATTTTCCAATTACCGAAACAAAACTCCTTCATTGATCGGTGGC
AAAAAGGTGAATAACCGGTGGGTTGAGCCCGGAAAGTTTTTCCGGGAGAAGATGTTGAAG
AGTGGTACAATCATGCCTATGCCAGATATTAAGGATAAGATGCCTAAAAGGTCCTTTTTG
CCCCGGGTGATTGCTGCGAAATTACCCTTTTCTACCTCAAAAATTGGTGAGCTGAAGAAA
ATTTTCCATGCCGCCAATGATTTTCAGGTGGCAAAGATGATCGGCGATGCATTGAGTGAG
TGTGAAAGAGCACCAAGCGCCGGCGAGACGAAACGGTGTGCTAACTCAGCTGAAGATATG
ATTGATTTCGCAATATCAGTGTTGGGTCAAAATGTGGTGGTTCGAACGACTGAGAATACA
AAAGGATCAAACGGTAATATCATGATAGGATCAGTCAAAGGAATCAACGGTGGAAAAGTC
ACTAAATCAGTATCATGTCATCAGACCTTGTACCCTTCCTTATTGTATTACTGTCATTCG
GTTCCTAAAGTCCGGGTCTATGAAGTGGATATTTTGGACCCGAATTCAAAGGCTAAGATC
AATCACGGCATTGCCATTTGCCATGTGGATACTTCTTTATGGGGACCCAAGCATGGAGCC
TTCAATGCACTCGGGTCAGGACCTGGGAAAATAGAGGTTTGTCACTGGATCTTTGAGAAT
GACATGACTTGGGCAATTGCTGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400053960
PEP Infomation

pacid=37443616 transcript=PGSC0003DMT400079564 locus=PGSC0003DMG400030981 ID=PGSC0003DMT400079564.v4.03 annot-version=v4.03
Sequence

MCAPDLSPSLEKHTGDIHFASYGNKNFTNYGTKEAGIGVNSFKNYTEEENFPMNSFRRYG
RDSPRDNQFDNYGPDGNTAVQSFNSYSTNTPGGSGKFNNYGPNSNDANMGFNSYADNGAG
SVQKFTNYAPIRSNIPNIHFTSYSDHGTGGEQEFKSYSDDANEANQSFINYGKDGNGANS
KFNSYGNKGSSINKFKNYGVEGNGISETFTNYREQSSFGNDRFTNYVKDANGGEANFTNY
GQSTDELDPGTDEFTTYGKGGNDPHINFKSYGGDKLFKGYVKDTATFSNYRNKTPSLIGG
KKVNNRWVEPGKFFREKMLKSGTIMPMPDIKDKMPKRSFLPRVIAAKLPFSTSKIGELKK
IFHAANDFQVAKMIGDALSECERAPSAGETKRCANSAEDMIDFAISVLGQNVVVRTTENT
KGSNGNIMIGSVKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKVRVYEVDILDPNSKAKI
NHGIAICHVDTSLWGPKHGAFNALGSGPGKIEVCHWIFENDMTWAIAD*

Transcript Sequence

Transcript ID

PGSC0003DMT400079564
Transcript Infomation

pacid=37443616 locus=PGSC0003DMG400030981 ID=PGSC0003DMT400079564.v4.03 annot-version=v4.03
Sequence

ATGTGCGCACCAGATTTGTCACCAAGTCTCGAAAAACACACAGGAGATATCCACTTTGCC
TCTTACGGCAACAAAAACTTCACCAATTACGGAACCAAAGAAGCTGGAATCGGAGTGAAC
TCCTTCAAAAACTATACTGAGGAAGAAAATTTCCCTATGAATTCTTTCAGGCGTTACGGT
AGAGATTCTCCCCGTGATAATCAATTTGACAACTACGGCCCTGATGGCAATACAGCTGTC
CAAAGTTTCAACAGCTATAGCACAAATACTCCAGGGGGTTCTGGCAAATTCAATAATTAC
GGCCCAAATAGCAATGATGCCAACATGGGGTTCAATTCCTATGCTGACAATGGAGCTGGT
TCGGTCCAAAAATTCACAAATTATGCCCCAATTCGGTCTAATATCCCTAATATACACTTC
ACTTCCTATTCCGACCACGGAACGGGTGGGGAACAAGAATTCAAATCCTACTCAGACGAT
GCAAATGAAGCTAATCAATCTTTCATAAACTATGGCAAAGATGGGAATGGTGCTAATAGT
AAATTCAACAGCTATGGAAACAAAGGCAGTAGTATAAACAAATTCAAAAACTATGGCGTT
GAAGGTAATGGTATATCTGAGACTTTTACTAACTACAGAGAACAATCAAGTTTTGGTAAT
GACAGGTTCACTAACTATGTTAAGGACGCAAATGGCGGTGAAGCAAATTTCACCAACTAT
GGTCAATCTACCGATGAACTTGATCCTGGTACTGATGAATTCACTACCTATGGCAAAGGA
GGTAATGACCCACATATTAATTTCAAGTCTTACGGAGGTGACAAACTCTTCAAAGGTTAT
GTCAAAGACACTGCCACATTTTCCAATTACCGAAACAAAACTCCTTCATTGATCGGTGGC
AAAAAGGTGAATAACCGGTGGGTTGAGCCCGGAAAGTTTTTCCGGGAGAAGATGTTGAAG
AGTGGTACAATCATGCCTATGCCAGATATTAAGGATAAGATGCCTAAAAGGTCCTTTTTG
CCCCGGGTGATTGCTGCGAAATTACCCTTTTCTACCTCAAAAATTGGTGAGCTGAAGAAA
ATTTTCCATGCCGCCAATGATTTTCAGGTGGCAAAGATGATCGGCGATGCATTGAGTGAG
TGTGAAAGAGCACCAAGCGCCGGCGAGACGAAACGGTGTGCTAACTCAGCTGAAGATATG
ATTGATTTCGCAATATCAGTGTTGGGTCAAAATGTGGTGGTTCGAACGACTGAGAATACA
AAAGGATCAAACGGTAATATCATGATAGGATCAGTCAAAGGAATCAACGGTGGAAAAGTC
ACTAAATCAGTATCATGTCATCAGACCTTGTACCCTTCCTTATTGTATTACTGTCATTCG
GTTCCTAAAGTCCGGGTCTATGAAGTGGATATTTTGGACCCGAATTCAAAGGCTAAGATC
AATCACGGCATTGCCATTTGCCATGTGGATACTTCTTTATGGGGACCCAAGCATGGAGCC
TTCAATGCACTCGGGTCAGGACCTGGGAAAATAGAGGTTTGTCACTGGATCTTTGAGAAT
GACATGACTTGGGCAATTGCTGATTGA